Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.73□□□□□ -2.53
RPUSD4Q96CM3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.73□□□□□ -2.53
RPUSD4Q96CM3 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.74□□□□□ -2.53
RPUSD4Q96CM3 RNU6-774P-201ENST00000363238 107 ntBASIC-0.74□□□□□ -2.53
RPUSD4Q96CM3 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.74□□□□□ -2.53
RPUSD4Q96CM3 SNORD114-17-201ENST00000364699 75 ntBASIC-0.74□□□□□ -2.53
RPUSD4Q96CM3 RNU6-106P-201ENST00000384405 107 ntBASIC-0.74□□□□□ -2.53
RPUSD4Q96CM3 MIR590-201ENST00000385008 97 ntBASIC-0.74□□□□□ -2.53
RPUSD4Q96CM3 SCARNA18B-201ENST00000458806 135 ntBASIC-0.74□□□□□ -2.53
RPUSD4Q96CM3 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.75□□□□□ -2.53
RPUSD4Q96CM3 RNU6-382P-201ENST00000365181 106 ntBASIC-0.75□□□□□ -2.53
RPUSD4Q96CM3 RNY1P7-201ENST00000384743 110 ntBASIC-0.75□□□□□ -2.53
RPUSD4Q96CM3 SNORD83B-201ENST00000386745 93 ntBASIC-0.75□□□□□ -2.53
RPUSD4Q96CM3 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.75□□□□□ -2.53
RPUSD4Q96CM3 RNU6-158P-201ENST00000517104 100 ntBASIC-0.75□□□□□ -2.53
RPUSD4Q96CM3 YWHAEP3-201ENST00000582767 121 ntBASIC-0.75□□□□□ -2.53
RPUSD4Q96CM3 uc_338.19-201ENST00000616808 99 ntBASIC-0.75□□□□□ -2.53
RPUSD4Q96CM3 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 RNU4-32P-201ENST00000363404 141 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 RNU6-554P-201ENST00000410466 106 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 RNU2-51P-201ENST00000410708 197 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 RNU4-63P-201ENST00000411313 118 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 AC021146.9-201ENST00000512503 156 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 SCARNA17-201ENST00000516183 144 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 RNA5SP470-201ENST00000516463 106 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 AC026421.1-201ENST00000519101 163 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 MIR548AG1-201ENST00000579932 66 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 MIR4636-201ENST00000582271 80 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 RNU6-208P-201ENST00000362431 107 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 RNU6-824P-201ENST00000363724 104 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 RNU6-260P-201ENST00000384092 107 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 MIR1236-201ENST00000408340 102 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 SNORD18.2-201ENST00000459604 70 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 RNU6-589P-201ENST00000516485 107 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 U6.81-201ENST00000612550 106 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 AL445584.3-201ENST00000617173 78 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 MIR203A-201ENST00000384836 110 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 MIR604-201ENST00000384880 94 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 snoU13.17-201ENST00000458802 104 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 RNU7-61P-201ENST00000515897 61 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 RNA5SP147-201ENST00000516493 109 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 MIR4796-201ENST00000580742 81 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 AL353803.5-201ENST00000599815 141 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 AL365222.1-201ENST00000614661 98 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 snoR1.1-201ENST00000628177 80 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 SNORA33.1-201ENST00000364957 130 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 SNORA62.4-201ENST00000365504 151 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 MIR224-201ENST00000384889 81 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 Z95118.1-201ENST00000421372 247 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 AC140658.3-201ENST00000567603 271 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 MIR378F-201ENST00000578143 78 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 RNU6-766P-201ENST00000362478 107 ntBASIC-0.8□□□□□ -2.54
RPUSD4Q96CM3 SNORA2.1-201ENST00000363089 137 ntBASIC-0.8□□□□□ -2.54
RPUSD4Q96CM3 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.8□□□□□ -2.54
RPUSD4Q96CM3 MT-TR-201ENST00000387439 65 ntBASIC-0.8□□□□□ -2.54
RPUSD4Q96CM3 SNORD115-22-201ENST00000364456 82 ntBASIC-0.81□□□□□ -2.54
RPUSD4Q96CM3 MIR8485-201ENST00000401372 91 ntBASIC-0.81□□□□□ -2.54
RPUSD4Q96CM3 MTATP8P2-201ENST00000435212 202 ntBASIC-0.81□□□□□ -2.54
RPUSD4Q96CM3 U6.96-201ENST00000636425 70 ntBASIC-0.81□□□□□ -2.54
RPUSD4Q96CM3 RNU6-22P-201ENST00000384355 107 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 RNU6-479P-201ENST00000516348 105 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 RNU6-752P-201ENST00000516376 102 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 AP002795.1-201ENST00000534879 84 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 MIR3657-201ENST00000584818 117 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 U7.3-201ENST00000616123 62 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 MIR4773-1-201ENST00000637203 78 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.83□□□□□ -2.54
RPUSD4Q96CM3 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.83□□□□□ -2.54
RPUSD4Q96CM3 MIR548M-201ENST00000408260 86 ntBASIC-0.83□□□□□ -2.54
RPUSD4Q96CM3 MIR1255B2-201ENST00000408618 67 ntBASIC-0.83□□□□□ -2.54
RPUSD4Q96CM3 RNU6-274P-201ENST00000459566 107 ntBASIC-0.83□□□□□ -2.54
RPUSD4Q96CM3 SNORD63.1-201ENST00000516178 80 ntBASIC-0.83□□□□□ -2.54
RPUSD4Q96CM3 MIR6509-201ENST00000614603 85 ntBASIC-0.83□□□□□ -2.54
RPUSD4Q96CM3 MIR6129-201ENST00000616087 109 ntBASIC-0.83□□□□□ -2.54
RPUSD4Q96CM3 SNORA19-201ENST00000384737 128 ntBASIC-0.84□□□□□ -2.54
RPUSD4Q96CM3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.84□□□□□ -2.54
RPUSD4Q96CM3 RNU6-758P-201ENST00000516292 89 ntBASIC-0.84□□□□□ -2.54
RPUSD4Q96CM3 RNU6-109P-201ENST00000516364 107 ntBASIC-0.84□□□□□ -2.54
RPUSD4Q96CM3 RNU6-184P-201ENST00000516514 107 ntBASIC-0.84□□□□□ -2.54
RPUSD4Q96CM3 MIR2052-201ENST00000636055 55 ntBASIC-0.85□□□□□ -2.55
RPUSD4Q96CM3 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.86□□□□□ -2.55
RPUSD4Q96CM3 AL691482.2-201ENST00000457453 84 ntBASIC-0.86□□□□□ -2.55
RPUSD4Q96CM3 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.86□□□□□ -2.55
RPUSD4Q96CM3 CYP3A54P-201ENST00000566950 75 ntBASIC-0.86□□□□□ -2.55
RPUSD4Q96CM3 MIR4324-201ENST00000584846 72 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms