Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 MIR582-201ENST00000365731 98 ntBASIC-0.31□□□□□ -2.46
CHMP4CQ96CF2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.31□□□□□ -2.46
CHMP4CQ96CF2 SNORD4A-201ENST00000459174 72 ntBASIC-0.31□□□□□ -2.46
CHMP4CQ96CF2 MIR6507-201ENST00000613630 70 ntBASIC-0.31□□□□□ -2.46
CHMP4CQ96CF2 RNU6-274P-201ENST00000459566 107 ntBASIC-0.32□□□□□ -2.46
CHMP4CQ96CF2 AP000676.1-201ENST00000533307 52 ntBASIC-0.32□□□□□ -2.46
CHMP4CQ96CF2 RNU6-824P-201ENST00000363724 104 ntBASIC-0.33□□□□□ -2.46
CHMP4CQ96CF2 RNU6-219P-201ENST00000364728 107 ntBASIC-0.33□□□□□ -2.46
CHMP4CQ96CF2 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.33□□□□□ -2.46
CHMP4CQ96CF2 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.33□□□□□ -2.46
CHMP4CQ96CF2 AC244250.2-201ENST00000418731 148 ntBASIC-0.33□□□□□ -2.46
CHMP4CQ96CF2 AC093729.1-201ENST00000513074 128 ntBASIC-0.33□□□□□ -2.46
CHMP4CQ96CF2 RNU6-844P-201ENST00000517175 102 ntBASIC-0.33□□□□□ -2.46
CHMP4CQ96CF2 RNU6-208P-201ENST00000362431 107 ntBASIC-0.34□□□□□ -2.46
CHMP4CQ96CF2 SNORD115-25-201ENST00000362619 82 ntBASIC-0.35□□□□□ -2.47
CHMP4CQ96CF2 SNORA63.6-201ENST00000364921 119 ntBASIC-0.35□□□□□ -2.47
CHMP4CQ96CF2 HAR1A.1-201ENST00000459583 118 ntBASIC-0.35□□□□□ -2.47
CHMP4CQ96CF2 MIR4263-201ENST00000584745 83 ntBASIC-0.35□□□□□ -2.47
CHMP4CQ96CF2 RNU6-455P-201ENST00000384681 107 ntBASIC-0.36□□□□□ -2.47
CHMP4CQ96CF2 SNORD77.2-201ENST00000391045 68 ntBASIC-0.36□□□□□ -2.47
CHMP4CQ96CF2 RNU6-267P-201ENST00000516714 103 ntBASIC-0.36□□□□□ -2.47
CHMP4CQ96CF2 AP001180.6-201ENST00000584918 159 ntBASIC-0.36□□□□□ -2.47
CHMP4CQ96CF2 U6.81-201ENST00000612550 106 ntBASIC-0.36□□□□□ -2.47
CHMP4CQ96CF2 RNY4P30-201ENST00000410216 95 ntBASIC-0.37□□□□□ -2.47
CHMP4CQ96CF2 RNA5SP25-201ENST00000410815 110 ntBASIC-0.37□□□□□ -2.47
CHMP4CQ96CF2 RNU6-758P-201ENST00000516292 89 ntBASIC-0.37□□□□□ -2.47
CHMP4CQ96CF2 MIR3666-201ENST00000607845 111 ntBASIC-0.37□□□□□ -2.47
CHMP4CQ96CF2 RNU6-990P-201ENST00000364385 104 ntBASIC-0.38□□□□□ -2.47
CHMP4CQ96CF2 SNORA49-201ENST00000386157 136 ntBASIC-0.38□□□□□ -2.47
CHMP4CQ96CF2 RNU6-592P-201ENST00000411333 103 ntBASIC-0.38□□□□□ -2.47
CHMP4CQ96CF2 AL691482.2-201ENST00000457453 84 ntBASIC-0.38□□□□□ -2.47
CHMP4CQ96CF2 MIR548BB-201ENST00000626714 66 ntBASIC-0.38□□□□□ -2.47
CHMP4CQ96CF2 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.39□□□□□ -2.47
CHMP4CQ96CF2 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.39□□□□□ -2.47
CHMP4CQ96CF2 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.39□□□□□ -2.47
CHMP4CQ96CF2 AC021146.9-201ENST00000512503 156 ntBASIC-0.39□□□□□ -2.47
CHMP4CQ96CF2 MIR4493-201ENST00000584016 73 ntBASIC-0.39□□□□□ -2.47
CHMP4CQ96CF2 MIR6509-201ENST00000614603 85 ntBASIC-0.39□□□□□ -2.47
CHMP4CQ96CF2 SNORD114-28-201ENST00000363610 72 ntBASIC-0.4□□□□□ -2.47
CHMP4CQ96CF2 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.4□□□□□ -2.47
CHMP4CQ96CF2 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.4□□□□□ -2.47
CHMP4CQ96CF2 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.4□□□□□ -2.47
CHMP4CQ96CF2 RNU6-681P-201ENST00000364012 104 ntBASIC-0.41□□□□□ -2.48
CHMP4CQ96CF2 RNU6-49P-201ENST00000384256 107 ntBASIC-0.41□□□□□ -2.48
CHMP4CQ96CF2 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.42□□□□□ -2.48
CHMP4CQ96CF2 RNU6-260P-201ENST00000384092 107 ntBASIC-0.42□□□□□ -2.48
CHMP4CQ96CF2 RNU6-675P-201ENST00000384236 104 ntBASIC-0.42□□□□□ -2.48
CHMP4CQ96CF2 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.42□□□□□ -2.48
CHMP4CQ96CF2 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.42□□□□□ -2.48
CHMP4CQ96CF2 MIR604-201ENST00000384880 94 ntBASIC-0.43□□□□□ -2.48
CHMP4CQ96CF2 SNORA40.17-201ENST00000517256 115 ntBASIC-0.43□□□□□ -2.48
CHMP4CQ96CF2 AC140658.3-201ENST00000567603 271 ntBASIC-0.43□□□□□ -2.48
CHMP4CQ96CF2 RNU6-752P-201ENST00000516376 102 ntBASIC-0.44□□□□□ -2.48
CHMP4CQ96CF2 IGLL4P-201ENST00000614590 133 ntBASIC-0.44□□□□□ -2.48
CHMP4CQ96CF2 MIR655-201ENST00000362159 97 ntBASIC-0.45□□□□□ -2.48
CHMP4CQ96CF2 MIR101-1-201ENST00000362265 75 ntBASIC-0.45□□□□□ -2.48
CHMP4CQ96CF2 RNU6-497P-201ENST00000365316 104 ntBASIC-0.45□□□□□ -2.48
CHMP4CQ96CF2 RNU6-900P-201ENST00000384498 102 ntBASIC-0.45□□□□□ -2.48
CHMP4CQ96CF2 MIR203A-201ENST00000384836 110 ntBASIC-0.45□□□□□ -2.48
CHMP4CQ96CF2 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.46□□□□□ -2.48
CHMP4CQ96CF2 RNU6-624P-201ENST00000363411 107 ntBASIC-0.46□□□□□ -2.48
CHMP4CQ96CF2 RNU6-340P-201ENST00000364005 107 ntBASIC-0.46□□□□□ -2.48
CHMP4CQ96CF2 SNORD114-15-201ENST00000364687 72 ntBASIC-0.46□□□□□ -2.48
CHMP4CQ96CF2 AC145423.2-201ENST00000610631 239 ntBASIC-0.46□□□□□ -2.48
CHMP4CQ96CF2 MIR8064-201ENST00000612863 90 ntBASIC-0.46□□□□□ -2.48
CHMP4CQ96CF2 RNU6-901P-201ENST00000384593 106 ntBASIC-0.47□□□□□ -2.48
CHMP4CQ96CF2 MIR9-2-201ENST00000384838 87 ntBASIC-0.47□□□□□ -2.48
CHMP4CQ96CF2 RNA5SP451-201ENST00000410588 110 ntBASIC-0.47□□□□□ -2.48
CHMP4CQ96CF2 YWHAEP3-201ENST00000582767 121 ntBASIC-0.47□□□□□ -2.48
CHMP4CQ96CF2 RNY1P1-201ENST00000364372 112 ntBASIC-0.48□□□□□ -2.49
CHMP4CQ96CF2 RNA5SP300-201ENST00000391197 107 ntBASIC-0.48□□□□□ -2.49
CHMP4CQ96CF2 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.48□□□□□ -2.49
CHMP4CQ96CF2 snoU13.13-201ENST00000458842 104 ntBASIC-0.48□□□□□ -2.49
CHMP4CQ96CF2 RNU6-320P-201ENST00000516511 106 ntBASIC-0.48□□□□□ -2.49
CHMP4CQ96CF2 MIR3657-201ENST00000584818 117 ntBASIC-0.48□□□□□ -2.49
CHMP4CQ96CF2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.48□□□□□ -2.49
CHMP4CQ96CF2 AC006160.2-201ENST00000637708 154 ntBASIC-0.48□□□□□ -2.49
CHMP4CQ96CF2 MIR4788-201ENST00000639104 80 ntBASIC-0.48□□□□□ -2.49
CHMP4CQ96CF2 SNORA2.1-201ENST00000363089 137 ntBASIC-0.49□□□□□ -2.49
CHMP4CQ96CF2 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.49□□□□□ -2.49
CHMP4CQ96CF2 snoU13.19-201ENST00000459148 104 ntBASIC-0.49□□□□□ -2.49
CHMP4CQ96CF2 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.49□□□□□ -2.49
CHMP4CQ96CF2 RNA5SP147-201ENST00000516493 109 ntBASIC-0.49□□□□□ -2.49
CHMP4CQ96CF2 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.49□□□□□ -2.49
CHMP4CQ96CF2 RNU6-502P-201ENST00000362419 108 ntBASIC-0.5□□□□□ -2.49
CHMP4CQ96CF2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.5□□□□□ -2.49
CHMP4CQ96CF2 AC108676.2-201ENST00000605225 163 ntBASIC-0.5□□□□□ -2.49
CHMP4CQ96CF2 U6.96-201ENST00000636425 70 ntBASIC-0.5□□□□□ -2.49
CHMP4CQ96CF2 RNU6-557P-201ENST00000516842 110 ntBASIC-0.51□□□□□ -2.49
CHMP4CQ96CF2 MIR6773-201ENST00000612812 74 ntBASIC-0.51□□□□□ -2.49
CHMP4CQ96CF2 RNA5SP368-201ENST00000364298 116 ntBASIC-0.52□□□□□ -2.49
CHMP4CQ96CF2 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.52□□□□□ -2.49
CHMP4CQ96CF2 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.52□□□□□ -2.49
CHMP4CQ96CF2 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.52□□□□□ -2.49
CHMP4CQ96CF2 RNA5SP66-201ENST00000517178 101 ntBASIC-0.52□□□□□ -2.49
CHMP4CQ96CF2 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
CHMP4CQ96CF2 RPS29P8-201ENST00000445109 171 ntBASIC-0.53□□□□□ -2.49
CHMP4CQ96CF2 RNU7-55P-201ENST00000459426 62 ntBASIC-0.53□□□□□ -2.49
CHMP4CQ96CF2 RNA5SP275-201ENST00000363936 118 ntBASIC-0.54□□□□□ -2.5
CHMP4CQ96CF2 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 287.8 ms