Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 MIR193B-201ENST00000384907 83 ntBASIC0.06□□□□□ -2.4
NPIPB3Q92617 RNU6-303P-201ENST00000517091 106 ntBASIC0.06□□□□□ -2.4
NPIPB3Q92617 MIR4666B-201ENST00000578142 81 ntBASIC0.06□□□□□ -2.4
NPIPB3Q92617 AC023932.2-201ENST00000603176 175 ntBASIC0.06□□□□□ -2.4
NPIPB3Q92617 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
NPIPB3Q92617 MIR6509-201ENST00000614603 85 ntBASIC0.06□□□□□ -2.4
NPIPB3Q92617 SNORD114-26-201ENST00000363543 72 ntBASIC0.05□□□□□ -2.4
NPIPB3Q92617 SNORA63.6-201ENST00000364921 119 ntBASIC0.05□□□□□ -2.4
NPIPB3Q92617 RNU7-159P-201ENST00000459284 62 ntBASIC0.05□□□□□ -2.4
NPIPB3Q92617 CR383656.4-201ENST00000546909 122 ntBASIC0.05□□□□□ -2.4
NPIPB3Q92617 MIR4514-201ENST00000581410 57 ntBASIC0.05□□□□□ -2.4
NPIPB3Q92617 MIR148A-201ENST00000362215 68 ntBASIC0.04□□□□□ -2.4
NPIPB3Q92617 Y_RNA.388-201ENST00000383919 113 ntBASIC0.04□□□□□ -2.4
NPIPB3Q92617 MIR106A-201ENST00000384870 81 ntBASIC0.04□□□□□ -2.4
NPIPB3Q92617 SNORD2-201ENST00000459163 69 ntBASIC0.04□□□□□ -2.4
NPIPB3Q92617 MIR4712-201ENST00000583750 82 ntBASIC0.04□□□□□ -2.4
NPIPB3Q92617 MIR1245B-201ENST00000636115 69 ntBASIC0.04□□□□□ -2.4
NPIPB3Q92617 Y_RNA.36-201ENST00000362602 112 ntBASIC0.03□□□□□ -2.4
NPIPB3Q92617 RNA5SP173-201ENST00000364857 136 ntBASIC0.03□□□□□ -2.4
NPIPB3Q92617 RNU6-1036P-201ENST00000383959 104 ntBASIC0.03□□□□□ -2.4
NPIPB3Q92617 RNU6-180P-201ENST00000516697 61 ntBASIC0.03□□□□□ -2.4
NPIPB3Q92617 PVT1_3.1-201ENST00000620853 95 ntBASIC0.03□□□□□ -2.4
NPIPB3Q92617 RNA5SP98-201ENST00000363158 137 ntBASIC0.02□□□□□ -2.41
NPIPB3Q92617 RNU6-260P-201ENST00000384092 107 ntBASIC0.02□□□□□ -2.41
NPIPB3Q92617 MIR203A-201ENST00000384836 110 ntBASIC0.02□□□□□ -2.41
NPIPB3Q92617 MIR7-2-201ENST00000384970 110 ntBASIC0.02□□□□□ -2.41
NPIPB3Q92617 RNU7-165P-201ENST00000458864 60 ntBASIC0.02□□□□□ -2.41
NPIPB3Q92617 AC021146.9-201ENST00000512503 156 ntBASIC0.02□□□□□ -2.41
NPIPB3Q92617 RNU6-807P-201ENST00000516805 107 ntBASIC0.02□□□□□ -2.41
NPIPB3Q92617 MIR1273G-201ENST00000577677 100 ntBASIC0.02□□□□□ -2.41
NPIPB3Q92617 MIR3657-201ENST00000584818 117 ntBASIC0.02□□□□□ -2.41
NPIPB3Q92617 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
NPIPB3Q92617 MIR3202-2-201ENST00000635980 79 ntBASIC0.02□□□□□ -2.41
NPIPB3Q92617 MIR1297-201ENST00000637311 77 ntBASIC0.02□□□□□ -2.41
NPIPB3Q92617 MIR330-201ENST00000362196 94 ntBASIC0.01□□□□□ -2.41
NPIPB3Q92617 SNORA2.1-201ENST00000363089 137 ntBASIC0.01□□□□□ -2.41
NPIPB3Q92617 Y_RNA.313-201ENST00000365095 103 ntBASIC0.01□□□□□ -2.41
NPIPB3Q92617 RNU6-787P-201ENST00000384032 107 ntBASIC0.01□□□□□ -2.41
NPIPB3Q92617 Y_RNA.532-201ENST00000384590 113 ntBASIC0.01□□□□□ -2.41
NPIPB3Q92617 AC074348.1-201ENST00000426503 132 ntBASIC0.01□□□□□ -2.41
NPIPB3Q92617 RNU6-1094P-201ENST00000362416 104 ntBASIC0□□□□□ -2.41
NPIPB3Q92617 Y_RNA.219-201ENST00000364232 113 ntBASIC0□□□□□ -2.41
NPIPB3Q92617 SNORA8.1-201ENST00000384250 140 ntBASIC0□□□□□ -2.41
NPIPB3Q92617 SNORA49-201ENST00000386157 136 ntBASIC0□□□□□ -2.41
NPIPB3Q92617 SNORA40.17-201ENST00000517256 115 ntBASIC0□□□□□ -2.41
NPIPB3Q92617 MIR4290-201ENST00000583807 95 ntBASIC0□□□□□ -2.41
NPIPB3Q92617 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.01□□□□□ -2.41
NPIPB3Q92617 RNU6-573P-201ENST00000383938 106 ntBASIC-0.01□□□□□ -2.41
NPIPB3Q92617 RNU6-929P-201ENST00000384429 107 ntBASIC-0.01□□□□□ -2.41
NPIPB3Q92617 RNA5SP147-201ENST00000516493 109 ntBASIC-0.01□□□□□ -2.41
NPIPB3Q92617 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.01□□□□□ -2.41
NPIPB3Q92617 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
NPIPB3Q92617 MIR4484-201ENST00000582855 83 ntBASIC-0.01□□□□□ -2.41
NPIPB3Q92617 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
NPIPB3Q92617 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.02□□□□□ -2.41
NPIPB3Q92617 MIR489-201ENST00000384923 84 ntBASIC-0.02□□□□□ -2.41
NPIPB3Q92617 MIR8087-201ENST00000612745 78 ntBASIC-0.02□□□□□ -2.41
NPIPB3Q92617 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.02□□□□□ -2.41
NPIPB3Q92617 SNORD115-25-201ENST00000362619 82 ntBASIC-0.03□□□□□ -2.41
NPIPB3Q92617 RNU6-330P-201ENST00000363015 107 ntBASIC-0.03□□□□□ -2.41
NPIPB3Q92617 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
NPIPB3Q92617 RNA5SP63-201ENST00000391225 112 ntBASIC-0.03□□□□□ -2.41
NPIPB3Q92617 snoU13.13-201ENST00000458842 104 ntBASIC-0.03□□□□□ -2.41
NPIPB3Q92617 MIR3675-201ENST00000583661 73 ntBASIC-0.03□□□□□ -2.41
NPIPB3Q92617 MIR6718-201ENST00000616153 80 ntBASIC-0.03□□□□□ -2.41
NPIPB3Q92617 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.04□□□□□ -2.42
NPIPB3Q92617 AC104692.1-201ENST00000472406 90 ntBASIC-0.04□□□□□ -2.42
NPIPB3Q92617 AP000676.1-201ENST00000533307 52 ntBASIC-0.04□□□□□ -2.42
NPIPB3Q92617 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.05□□□□□ -2.42
NPIPB3Q92617 RNU6-228P-201ENST00000362700 106 ntBASIC-0.06□□□□□ -2.42
NPIPB3Q92617 RNU6-46P-201ENST00000383860 107 ntBASIC-0.06□□□□□ -2.42
NPIPB3Q92617 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.06□□□□□ -2.42
NPIPB3Q92617 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.06□□□□□ -2.42
NPIPB3Q92617 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
NPIPB3Q92617 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.06□□□□□ -2.42
NPIPB3Q92617 RNA5SP480-201ENST00000516840 109 ntBASIC-0.06□□□□□ -2.42
NPIPB3Q92617 AC145423.2-201ENST00000610631 239 ntBASIC-0.06□□□□□ -2.42
NPIPB3Q92617 MIR6507-201ENST00000613630 70 ntBASIC-0.06□□□□□ -2.42
NPIPB3Q92617 SNORA72.7-201ENST00000516349 94 ntBASIC-0.07□□□□□ -2.42
NPIPB3Q92617 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.08□□□□□ -2.42
NPIPB3Q92617 SNORD78.1-201ENST00000390866 65 ntBASIC-0.08□□□□□ -2.42
NPIPB3Q92617 AC244250.2-201ENST00000418731 148 ntBASIC-0.08□□□□□ -2.42
NPIPB3Q92617 SCARNA18B-201ENST00000458806 135 ntBASIC-0.08□□□□□ -2.42
NPIPB3Q92617 MIR1295B-201ENST00000636144 60 ntBASIC-0.08□□□□□ -2.42
NPIPB3Q92617 U6.96-201ENST00000636425 70 ntBASIC-0.08□□□□□ -2.42
NPIPB3Q92617 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.09□□□□□ -2.42
NPIPB3Q92617 RNU6-455P-201ENST00000384681 107 ntBASIC-0.09□□□□□ -2.42
NPIPB3Q92617 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
NPIPB3Q92617 RNU6-604P-201ENST00000390917 100 ntBASIC-0.09□□□□□ -2.42
NPIPB3Q92617 MIR1255A-201ENST00000408338 113 ntBASIC-0.09□□□□□ -2.42
NPIPB3Q92617 MIR6773-201ENST00000612812 74 ntBASIC-0.09□□□□□ -2.42
NPIPB3Q92617 MIR6739-201ENST00000622461 75 ntBASIC-0.09□□□□□ -2.42
NPIPB3Q92617 RNU6-502P-201ENST00000362419 108 ntBASIC-0.1□□□□□ -2.43
NPIPB3Q92617 SNORD49B-201ENST00000365172 72 ntBASIC-0.1□□□□□ -2.43
NPIPB3Q92617 MIR521-2-201ENST00000384818 87 ntBASIC-0.1□□□□□ -2.43
NPIPB3Q92617 MIR5190-201ENST00000581537 80 ntBASIC-0.1□□□□□ -2.43
NPIPB3Q92617 SNORD45.1-201ENST00000363181 77 ntBASIC-0.11□□□□□ -2.43
NPIPB3Q92617 SNORA33.1-201ENST00000364957 130 ntBASIC-0.11□□□□□ -2.43
NPIPB3Q92617 RNU6-279P-201ENST00000391297 101 ntBASIC-0.11□□□□□ -2.43
NPIPB3Q92617 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 489 ms