Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TMEM40Q8WWA1 Y_RNA.379-201ENST00000365653 102 ntBASIC1.18□□□□□ -2.22
TMEM40Q8WWA1 Y_RNA.407-201ENST00000383986 113 ntBASIC1.18□□□□□ -2.22
TMEM40Q8WWA1 RNU6-520P-201ENST00000384717 104 ntBASIC1.18□□□□□ -2.22
TMEM40Q8WWA1 RPS29P1-201ENST00000465274 159 ntBASIC1.18□□□□□ -2.22
TMEM40Q8WWA1 AC011195.1-201ENST00000578177 177 ntBASIC1.18□□□□□ -2.22
TMEM40Q8WWA1 uc_338.10-201ENST00000621872 182 ntBASIC1.18□□□□□ -2.22
TMEM40Q8WWA1 AC090617.8-201ENST00000623339 167 ntBASIC1.18□□□□□ -2.22
TMEM40Q8WWA1 CYP3A54P-201ENST00000566950 75 ntBASIC1.17□□□□□ -2.22
TMEM40Q8WWA1 SNORD114-21-201ENST00000606412 72 ntBASIC1.17□□□□□ -2.22
TMEM40Q8WWA1 SNORA36.1-201ENST00000363424 132 ntBASIC1.16□□□□□ -2.22
TMEM40Q8WWA1 RNA5SP227-201ENST00000516184 113 ntBASIC1.16□□□□□ -2.22
TMEM40Q8WWA1 MIR4661-201ENST00000582720 75 ntBASIC1.16□□□□□ -2.22
TMEM40Q8WWA1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TMEM40Q8WWA1 MIR373-201ENST00000362273 69 ntBASIC1.15□□□□□ -2.23
TMEM40Q8WWA1 SNORD110-201ENST00000408189 75 ntBASIC1.15□□□□□ -2.23
TMEM40Q8WWA1 snoU13.18-201ENST00000459483 104 ntBASIC1.15□□□□□ -2.23
TMEM40Q8WWA1 MIR6828-201ENST00000636181 60 ntBASIC1.15□□□□□ -2.23
TMEM40Q8WWA1 U6.96-201ENST00000636425 70 ntBASIC1.15□□□□□ -2.23
TMEM40Q8WWA1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
TMEM40Q8WWA1 AC006210.1-201ENST00000424882 111 ntBASIC1.14□□□□□ -2.23
TMEM40Q8WWA1 RNU6-231P-201ENST00000517122 103 ntBASIC1.14□□□□□ -2.23
TMEM40Q8WWA1 MIR4752-201ENST00000579672 72 ntBASIC1.14□□□□□ -2.23
TMEM40Q8WWA1 MIR516B1-201ENST00000385211 90 ntBASIC1.13□□□□□ -2.23
TMEM40Q8WWA1 SNORD116.2-201ENST00000391251 93 ntBASIC1.13□□□□□ -2.23
TMEM40Q8WWA1 RNU6-980P-201ENST00000516925 103 ntBASIC1.13□□□□□ -2.23
TMEM40Q8WWA1 SNORA70.25-201ENST00000612741 95 ntBASIC1.13□□□□□ -2.23
TMEM40Q8WWA1 RNU4-45P-201ENST00000365469 141 ntBASIC1.12□□□□□ -2.23
TMEM40Q8WWA1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.12□□□□□ -2.23
TMEM40Q8WWA1 AL353765.1-201ENST00000605514 183 ntBASIC1.12□□□□□ -2.23
TMEM40Q8WWA1 MIR18A-201ENST00000362310 71 ntBASIC1.11□□□□□ -2.23
TMEM40Q8WWA1 RNU4-38P-201ENST00000364472 129 ntBASIC1.11□□□□□ -2.23
TMEM40Q8WWA1 RNU7-119P-201ENST00000459279 63 ntBASIC1.11□□□□□ -2.23
TMEM40Q8WWA1 RNU6-518P-201ENST00000516056 96 ntBASIC1.11□□□□□ -2.23
TMEM40Q8WWA1 RNA5SP268-201ENST00000516828 124 ntBASIC1.11□□□□□ -2.23
TMEM40Q8WWA1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
TMEM40Q8WWA1 RNU6-35P-201ENST00000384530 107 ntBASIC1.1□□□□□ -2.23
TMEM40Q8WWA1 MIR548J-201ENST00000408833 112 ntBASIC1.1□□□□□ -2.23
TMEM40Q8WWA1 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
TMEM40Q8WWA1 RNA5SP220-201ENST00000516298 104 ntBASIC1.1□□□□□ -2.23
TMEM40Q8WWA1 MIR3973-201ENST00000579824 107 ntBASIC1.1□□□□□ -2.23
TMEM40Q8WWA1 MIR7107-201ENST00000611489 80 ntBASIC1.1□□□□□ -2.23
TMEM40Q8WWA1 AC022709.1-201ENST00000615967 87 ntBASIC1.1□□□□□ -2.23
TMEM40Q8WWA1 RNU6-42P-201ENST00000384165 107 ntBASIC1.09□□□□□ -2.23
TMEM40Q8WWA1 MIR519A2-201ENST00000384990 87 ntBASIC1.09□□□□□ -2.23
TMEM40Q8WWA1 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
TMEM40Q8WWA1 MIR1255B2-201ENST00000408618 67 ntBASIC1.09□□□□□ -2.23
TMEM40Q8WWA1 RNA5SP222-201ENST00000411039 105 ntBASIC1.09□□□□□ -2.23
TMEM40Q8WWA1 SNORA40.16-201ENST00000517238 121 ntBASIC1.09□□□□□ -2.23
TMEM40Q8WWA1 MIR548AG1-201ENST00000579932 66 ntBASIC1.09□□□□□ -2.23
TMEM40Q8WWA1 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.09□□□□□ -2.23
TMEM40Q8WWA1 MIR6788-201ENST00000618842 66 ntBASIC1.09□□□□□ -2.23
TMEM40Q8WWA1 Y_RNA.74-201ENST00000362911 99 ntBASIC1.08□□□□□ -2.24
TMEM40Q8WWA1 Y_RNA.282-201ENST00000364793 102 ntBASIC1.08□□□□□ -2.24
TMEM40Q8WWA1 AC243829.6-201ENST00000612652 106 ntBASIC1.08□□□□□ -2.24
TMEM40Q8WWA1 MIR6734-201ENST00000621166 68 ntBASIC1.08□□□□□ -2.24
TMEM40Q8WWA1 MIR527-201ENST00000385244 85 ntBASIC1.07□□□□□ -2.24
TMEM40Q8WWA1 AL021921.1-201ENST00000442774 93 ntBASIC1.07□□□□□ -2.24
TMEM40Q8WWA1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.07□□□□□ -2.24
TMEM40Q8WWA1 MIR151B-201ENST00000584249 96 ntBASIC1.07□□□□□ -2.24
TMEM40Q8WWA1 RNU4-33P-201ENST00000364316 85 ntBASIC1.06□□□□□ -2.24
TMEM40Q8WWA1 SNORD116-16-201ENST00000384533 92 ntBASIC1.06□□□□□ -2.24
TMEM40Q8WWA1 HMGN2P22-201ENST00000427588 175 ntBASIC1.06□□□□□ -2.24
TMEM40Q8WWA1 RNA5SP94-201ENST00000516917 108 ntBASIC1.06□□□□□ -2.24
TMEM40Q8WWA1 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.05□□□□□ -2.24
TMEM40Q8WWA1 AC211469.2-201ENST00000605461 205 ntBASIC1.05□□□□□ -2.24
TMEM40Q8WWA1 MIR7110-201ENST00000612638 86 ntBASIC1.05□□□□□ -2.24
TMEM40Q8WWA1 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.05□□□□□ -2.24
TMEM40Q8WWA1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
TMEM40Q8WWA1 RNU6-810P-201ENST00000364001 107 ntBASIC1.04□□□□□ -2.24
TMEM40Q8WWA1 MIR608-201ENST00000384820 100 ntBASIC1.04□□□□□ -2.24
TMEM40Q8WWA1 MIR532-201ENST00000385025 91 ntBASIC1.04□□□□□ -2.24
TMEM40Q8WWA1 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
TMEM40Q8WWA1 SNORA36.2-201ENST00000384004 127 ntBASIC1.03□□□□□ -2.24
TMEM40Q8WWA1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.03□□□□□ -2.24
TMEM40Q8WWA1 RNU6-1223P-201ENST00000517124 104 ntBASIC1.03□□□□□ -2.24
TMEM40Q8WWA1 RNU1-29P-201ENST00000606574 126 ntBASIC1.03□□□□□ -2.24
TMEM40Q8WWA1 AC243829.3-201ENST00000622177 108 ntBASIC1.03□□□□□ -2.24
TMEM40Q8WWA1 RNY1P8-201ENST00000383970 114 ntBASIC1.02□□□□□ -2.25
TMEM40Q8WWA1 RNU6-930P-201ENST00000390938 100 ntBASIC1.02□□□□□ -2.25
TMEM40Q8WWA1 RNU6-337P-201ENST00000391243 106 ntBASIC1.02□□□□□ -2.25
TMEM40Q8WWA1 MIR4698-201ENST00000577795 80 ntBASIC1.02□□□□□ -2.25
TMEM40Q8WWA1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
TMEM40Q8WWA1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
TMEM40Q8WWA1 Y_RNA.109-201ENST00000363215 102 ntBASIC1.01□□□□□ -2.25
TMEM40Q8WWA1 AC069271.1-201ENST00000445577 156 ntBASIC1.01□□□□□ -2.25
TMEM40Q8WWA1 ACA64.5-201ENST00000516207 127 ntBASIC1.01□□□□□ -2.25
TMEM40Q8WWA1 Y_RNA.540-201ENST00000384638 111 ntBASIC1□□□□□ -2.25
TMEM40Q8WWA1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1□□□□□ -2.25
TMEM40Q8WWA1 RNU6-172P-201ENST00000411000 93 ntBASIC1□□□□□ -2.25
TMEM40Q8WWA1 RNA5SP436-201ENST00000516020 115 ntBASIC1□□□□□ -2.25
TMEM40Q8WWA1 MIR6857-201ENST00000613267 93 ntBASIC1□□□□□ -2.25
TMEM40Q8WWA1 MIR20A-201ENST00000362279 71 ntBASIC0.99□□□□□ -2.25
TMEM40Q8WWA1 SNORD1B-201ENST00000363091 84 ntBASIC0.99□□□□□ -2.25
TMEM40Q8WWA1 AC244090.1-201ENST00000441884 93 ntBASIC0.99□□□□□ -2.25
TMEM40Q8WWA1 MIR548X-201ENST00000580069 75 ntBASIC0.99□□□□□ -2.25
TMEM40Q8WWA1 SNORA40B-201ENST00000385573 128 ntBASIC0.98□□□□□ -2.25
TMEM40Q8WWA1 RNU6-1232P-201ENST00000516299 86 ntBASIC0.98□□□□□ -2.25
TMEM40Q8WWA1 CYP3A137P-201ENST00000562436 69 ntBASIC0.98□□□□□ -2.25
TMEM40Q8WWA1 MIR6515-201ENST00000619843 57 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 212.7 ms