Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 MIR582-201ENST00000365731 98 ntBASIC1.03□□□□□ -2.24
SH3RF3Q8TEJ3 MIR630-201ENST00000384957 97 ntBASIC1.03□□□□□ -2.24
SH3RF3Q8TEJ3 SNORD124-201ENST00000459577 104 ntBASIC1.03□□□□□ -2.24
SH3RF3Q8TEJ3 SCARNA16.5-201ENST00000517114 183 ntBASIC1.03□□□□□ -2.24
SH3RF3Q8TEJ3 CYP3A137P-201ENST00000562436 69 ntBASIC1.03□□□□□ -2.24
SH3RF3Q8TEJ3 MIR1273G-201ENST00000577677 100 ntBASIC1.03□□□□□ -2.24
SH3RF3Q8TEJ3 MIR548V-201ENST00000584165 80 ntBASIC1.03□□□□□ -2.24
SH3RF3Q8TEJ3 RNU6-1184P-201ENST00000384588 108 ntBASIC1.02□□□□□ -2.25
SH3RF3Q8TEJ3 MIR548L-201ENST00000408303 86 ntBASIC1.02□□□□□ -2.25
SH3RF3Q8TEJ3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
SH3RF3Q8TEJ3 RNU6-469P-201ENST00000516253 101 ntBASIC1.02□□□□□ -2.25
SH3RF3Q8TEJ3 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
SH3RF3Q8TEJ3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.02□□□□□ -2.25
SH3RF3Q8TEJ3 SNORA36.1-201ENST00000363424 132 ntBASIC1.01□□□□□ -2.25
SH3RF3Q8TEJ3 SNORA33.1-201ENST00000364957 130 ntBASIC1.01□□□□□ -2.25
SH3RF3Q8TEJ3 Y_RNA.722-201ENST00000517279 114 ntBASIC1.01□□□□□ -2.25
SH3RF3Q8TEJ3 MIR548AE1-201ENST00000583292 70 ntBASIC1.01□□□□□ -2.25
SH3RF3Q8TEJ3 Y_RNA.115-201ENST00000363272 98 ntBASIC1□□□□□ -2.25
SH3RF3Q8TEJ3 RNU6-936P-201ENST00000384005 107 ntBASIC1□□□□□ -2.25
SH3RF3Q8TEJ3 FABP5P4-201ENST00000437203 171 ntBASIC1□□□□□ -2.25
SH3RF3Q8TEJ3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1□□□□□ -2.25
SH3RF3Q8TEJ3 RNU6-1162P-201ENST00000384443 104 ntBASIC0.99□□□□□ -2.25
SH3RF3Q8TEJ3 MIR652-201ENST00000385278 98 ntBASIC0.99□□□□□ -2.25
SH3RF3Q8TEJ3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
SH3RF3Q8TEJ3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.99□□□□□ -2.25
SH3RF3Q8TEJ3 AL590095.2-201ENST00000604136 117 ntBASIC0.99□□□□□ -2.25
SH3RF3Q8TEJ3 RNU6-698P-201ENST00000363523 107 ntBASIC0.98□□□□□ -2.25
SH3RF3Q8TEJ3 SNORD114-4-201ENST00000363962 75 ntBASIC0.98□□□□□ -2.25
SH3RF3Q8TEJ3 RNU6-34P-201ENST00000364874 107 ntBASIC0.98□□□□□ -2.25
SH3RF3Q8TEJ3 RNU6-302P-201ENST00000365249 107 ntBASIC0.98□□□□□ -2.25
SH3RF3Q8TEJ3 MIR548E-201ENST00000408287 88 ntBASIC0.98□□□□□ -2.25
SH3RF3Q8TEJ3 MIR18A-201ENST00000362310 71 ntBASIC0.97□□□□□ -2.25
SH3RF3Q8TEJ3 RNU6-1312P-201ENST00000362425 108 ntBASIC0.97□□□□□ -2.25
SH3RF3Q8TEJ3 Y_RNA.125-201ENST00000363371 111 ntBASIC0.97□□□□□ -2.25
SH3RF3Q8TEJ3 AC021146.9-201ENST00000512503 156 ntBASIC0.97□□□□□ -2.25
SH3RF3Q8TEJ3 SCARNA17.3-201ENST00000516381 125 ntBASIC0.97□□□□□ -2.25
SH3RF3Q8TEJ3 SNORA41B-201ENST00000384785 128 ntBASIC0.96□□□□□ -2.26
SH3RF3Q8TEJ3 MIR517B-201ENST00000385102 67 ntBASIC0.96□□□□□ -2.26
SH3RF3Q8TEJ3 SNORD113-2-201ENST00000391082 72 ntBASIC0.96□□□□□ -2.26
SH3RF3Q8TEJ3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.96□□□□□ -2.26
SH3RF3Q8TEJ3 RNU1-29P-201ENST00000606574 126 ntBASIC0.96□□□□□ -2.26
SH3RF3Q8TEJ3 AC090617.8-201ENST00000623339 167 ntBASIC0.96□□□□□ -2.26
SH3RF3Q8TEJ3 RNU6-1246P-201ENST00000391064 107 ntBASIC0.95□□□□□ -2.26
SH3RF3Q8TEJ3 RNU6-808P-201ENST00000391233 108 ntBASIC0.95□□□□□ -2.26
SH3RF3Q8TEJ3 RNA5SP255-201ENST00000516370 107 ntBASIC0.95□□□□□ -2.26
SH3RF3Q8TEJ3 SNORA63.6-201ENST00000364921 119 ntBASIC0.94□□□□□ -2.26
SH3RF3Q8TEJ3 Y_RNA.325-201ENST00000365171 122 ntBASIC0.94□□□□□ -2.26
SH3RF3Q8TEJ3 Y_RNA.407-201ENST00000383986 113 ntBASIC0.94□□□□□ -2.26
SH3RF3Q8TEJ3 SNORA15B-2-201ENST00000384058 135 ntBASIC0.94□□□□□ -2.26
SH3RF3Q8TEJ3 SNORA15B-1-201ENST00000384334 135 ntBASIC0.94□□□□□ -2.26
SH3RF3Q8TEJ3 MIR548C-201ENST00000384815 97 ntBASIC0.94□□□□□ -2.26
SH3RF3Q8TEJ3 RNU6-351P-201ENST00000516097 100 ntBASIC0.94□□□□□ -2.26
SH3RF3Q8TEJ3 MIR4714-201ENST00000580728 77 ntBASIC0.94□□□□□ -2.26
SH3RF3Q8TEJ3 MIR7107-201ENST00000611489 80 ntBASIC0.94□□□□□ -2.26
SH3RF3Q8TEJ3 RNA5SP62-201ENST00000363457 110 ntBASIC0.93□□□□□ -2.26
SH3RF3Q8TEJ3 SNORD114-2-201ENST00000363953 78 ntBASIC0.93□□□□□ -2.26
SH3RF3Q8TEJ3 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
SH3RF3Q8TEJ3 RNA5SP268-201ENST00000516828 124 ntBASIC0.93□□□□□ -2.26
SH3RF3Q8TEJ3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.93□□□□□ -2.26
SH3RF3Q8TEJ3 MIR548AD-201ENST00000584780 82 ntBASIC0.93□□□□□ -2.26
SH3RF3Q8TEJ3 SNORA70.25-201ENST00000612741 95 ntBASIC0.93□□□□□ -2.26
SH3RF3Q8TEJ3 MIR924-201ENST00000638017 53 ntBASIC0.93□□□□□ -2.26
SH3RF3Q8TEJ3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SH3RF3Q8TEJ3 SNORD99-201ENST00000408612 74 ntBASIC0.92□□□□□ -2.26
SH3RF3Q8TEJ3 RNA5SP227-201ENST00000516184 113 ntBASIC0.92□□□□□ -2.26
SH3RF3Q8TEJ3 RNA5SP476-201ENST00000516613 103 ntBASIC0.92□□□□□ -2.26
SH3RF3Q8TEJ3 RNA5SP94-201ENST00000516917 108 ntBASIC0.92□□□□□ -2.26
SH3RF3Q8TEJ3 AC011195.1-201ENST00000578177 177 ntBASIC0.92□□□□□ -2.26
SH3RF3Q8TEJ3 AC025627.3-201ENST00000582078 182 ntBASIC0.92□□□□□ -2.26
SH3RF3Q8TEJ3 MIR4473-201ENST00000583731 91 ntBASIC0.92□□□□□ -2.26
SH3RF3Q8TEJ3 SNORD110-201ENST00000408189 75 ntBASIC0.91□□□□□ -2.26
SH3RF3Q8TEJ3 HAR1A.1-201ENST00000459583 118 ntBASIC0.91□□□□□ -2.26
SH3RF3Q8TEJ3 RNU6-980P-201ENST00000516925 103 ntBASIC0.91□□□□□ -2.26
SH3RF3Q8TEJ3 MIR548AG1-201ENST00000579932 66 ntBASIC0.91□□□□□ -2.26
SH3RF3Q8TEJ3 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.91□□□□□ -2.26
SH3RF3Q8TEJ3 RNA5SP257-201ENST00000363023 116 ntBASIC0.9□□□□□ -2.27
SH3RF3Q8TEJ3 RNU4-88P-201ENST00000411220 86 ntBASIC0.9□□□□□ -2.27
SH3RF3Q8TEJ3 HMGN2P22-201ENST00000427588 175 ntBASIC0.9□□□□□ -2.27
SH3RF3Q8TEJ3 MIR4752-201ENST00000579672 72 ntBASIC0.9□□□□□ -2.27
SH3RF3Q8TEJ3 Y_RNA.246-201ENST00000364495 108 ntBASIC0.89□□□□□ -2.27
SH3RF3Q8TEJ3 RNU6-520P-201ENST00000384717 104 ntBASIC0.89□□□□□ -2.27
SH3RF3Q8TEJ3 MIR608-201ENST00000384820 100 ntBASIC0.89□□□□□ -2.27
SH3RF3Q8TEJ3 MIR516B1-201ENST00000385211 90 ntBASIC0.89□□□□□ -2.27
SH3RF3Q8TEJ3 AC006210.1-201ENST00000424882 111 ntBASIC0.89□□□□□ -2.27
SH3RF3Q8TEJ3 RNA5SP330-201ENST00000517096 96 ntBASIC0.89□□□□□ -2.27
SH3RF3Q8TEJ3 CYP3A54P-201ENST00000566950 75 ntBASIC0.89□□□□□ -2.27
SH3RF3Q8TEJ3 MIR6835-201ENST00000621552 64 ntBASIC0.89□□□□□ -2.27
SH3RF3Q8TEJ3 uc_338.10-201ENST00000621872 182 ntBASIC0.89□□□□□ -2.27
SH3RF3Q8TEJ3 SNORA9.1-201ENST00000362412 131 ntBASIC0.88□□□□□ -2.27
SH3RF3Q8TEJ3 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
SH3RF3Q8TEJ3 MIR4653-201ENST00000585107 83 ntBASIC0.88□□□□□ -2.27
SH3RF3Q8TEJ3 SNORD114-23-201ENST00000363536 72 ntBASIC0.87□□□□□ -2.27
SH3RF3Q8TEJ3 MIR508-201ENST00000384857 115 ntBASIC0.87□□□□□ -2.27
SH3RF3Q8TEJ3 RNU6-231P-201ENST00000517122 103 ntBASIC0.87□□□□□ -2.27
SH3RF3Q8TEJ3 MIR6866-201ENST00000638146 69 ntBASIC0.87□□□□□ -2.27
SH3RF3Q8TEJ3 RNY1P8-201ENST00000383970 114 ntBASIC0.86□□□□□ -2.27
SH3RF3Q8TEJ3 SNORA49-201ENST00000386157 136 ntBASIC0.86□□□□□ -2.27
SH3RF3Q8TEJ3 RNU6-337P-201ENST00000391243 106 ntBASIC0.86□□□□□ -2.27
SH3RF3Q8TEJ3 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
SH3RF3Q8TEJ3 RNA5SP121-201ENST00000516537 101 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 1333.2 ms