Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MIR26B-201ENST00000362251 77 ntBASIC1.14□□□□□ -2.23
SHKBP1Q8TBC3 RNU1-124P-201ENST00000363861 145 ntBASIC1.14□□□□□ -2.23
SHKBP1Q8TBC3 Y_RNA.246-201ENST00000364495 108 ntBASIC1.14□□□□□ -2.23
SHKBP1Q8TBC3 SNORA41B-201ENST00000384785 128 ntBASIC1.14□□□□□ -2.23
SHKBP1Q8TBC3 SNORD99-201ENST00000408612 74 ntBASIC1.14□□□□□ -2.23
SHKBP1Q8TBC3 RNA5SP220-201ENST00000516298 104 ntBASIC1.14□□□□□ -2.23
SHKBP1Q8TBC3 RNA5SP94-201ENST00000516917 108 ntBASIC1.14□□□□□ -2.23
SHKBP1Q8TBC3 Y_RNA.325-201ENST00000365171 122 ntBASIC1.13□□□□□ -2.23
SHKBP1Q8TBC3 RNU4-45P-201ENST00000365469 141 ntBASIC1.13□□□□□ -2.23
SHKBP1Q8TBC3 RNU6-42P-201ENST00000384165 107 ntBASIC1.13□□□□□ -2.23
SHKBP1Q8TBC3 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
SHKBP1Q8TBC3 SNORA70.25-201ENST00000612741 95 ntBASIC1.13□□□□□ -2.23
SHKBP1Q8TBC3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SHKBP1Q8TBC3 CYP3A54P-201ENST00000566950 75 ntBASIC1.12□□□□□ -2.23
SHKBP1Q8TBC3 MIR6734-201ENST00000621166 68 ntBASIC1.12□□□□□ -2.23
SHKBP1Q8TBC3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.12□□□□□ -2.23
SHKBP1Q8TBC3 MIR618-201ENST00000385287 98 ntBASIC1.11□□□□□ -2.23
SHKBP1Q8TBC3 RNU6-1246P-201ENST00000391064 107 ntBASIC1.11□□□□□ -2.23
SHKBP1Q8TBC3 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.11□□□□□ -2.23
SHKBP1Q8TBC3 SNORA9.1-201ENST00000362412 131 ntBASIC1.1□□□□□ -2.23
SHKBP1Q8TBC3 MIR516B1-201ENST00000385211 90 ntBASIC1.1□□□□□ -2.23
SHKBP1Q8TBC3 MIR4752-201ENST00000579672 72 ntBASIC1.1□□□□□ -2.23
SHKBP1Q8TBC3 MIR548AD-201ENST00000584780 82 ntBASIC1.1□□□□□ -2.23
SHKBP1Q8TBC3 SNORD114-21-201ENST00000606412 72 ntBASIC1.1□□□□□ -2.23
SHKBP1Q8TBC3 AC090617.8-201ENST00000623339 167 ntBASIC1.1□□□□□ -2.23
SHKBP1Q8TBC3 U6.96-201ENST00000636425 70 ntBASIC1.1□□□□□ -2.23
SHKBP1Q8TBC3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
SHKBP1Q8TBC3 SNORA25.8-201ENST00000364831 128 ntBASIC1.09□□□□□ -2.23
SHKBP1Q8TBC3 HMGN2P22-201ENST00000427588 175 ntBASIC1.09□□□□□ -2.23
SHKBP1Q8TBC3 RNU1-29P-201ENST00000606574 126 ntBASIC1.09□□□□□ -2.23
SHKBP1Q8TBC3 AC022709.1-201ENST00000615967 87 ntBASIC1.09□□□□□ -2.23
SHKBP1Q8TBC3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
SHKBP1Q8TBC3 RNU6-939P-201ENST00000384634 107 ntBASIC1.08□□□□□ -2.24
SHKBP1Q8TBC3 MIR6788-201ENST00000618842 66 ntBASIC1.08□□□□□ -2.24
SHKBP1Q8TBC3 MIR373-201ENST00000362273 69 ntBASIC1.07□□□□□ -2.24
SHKBP1Q8TBC3 MIR548J-201ENST00000408833 112 ntBASIC1.07□□□□□ -2.24
SHKBP1Q8TBC3 AL021921.1-201ENST00000442774 93 ntBASIC1.07□□□□□ -2.24
SHKBP1Q8TBC3 RNU7-119P-201ENST00000459279 63 ntBASIC1.07□□□□□ -2.24
SHKBP1Q8TBC3 RNU6-231P-201ENST00000517122 103 ntBASIC1.07□□□□□ -2.24
SHKBP1Q8TBC3 MIR151B-201ENST00000584249 96 ntBASIC1.07□□□□□ -2.24
SHKBP1Q8TBC3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.06□□□□□ -2.24
SHKBP1Q8TBC3 RNU6-518P-201ENST00000516056 96 ntBASIC1.06□□□□□ -2.24
SHKBP1Q8TBC3 AC243829.6-201ENST00000612652 106 ntBASIC1.06□□□□□ -2.24
SHKBP1Q8TBC3 AC243829.3-201ENST00000622177 108 ntBASIC1.06□□□□□ -2.24
SHKBP1Q8TBC3 Y_RNA.74-201ENST00000362911 99 ntBASIC1.05□□□□□ -2.24
SHKBP1Q8TBC3 RNU4-38P-201ENST00000364472 129 ntBASIC1.05□□□□□ -2.24
SHKBP1Q8TBC3 Y_RNA.379-201ENST00000365653 102 ntBASIC1.05□□□□□ -2.24
SHKBP1Q8TBC3 RNA5SP222-201ENST00000411039 105 ntBASIC1.05□□□□□ -2.24
SHKBP1Q8TBC3 RNU4-88P-201ENST00000411220 86 ntBASIC1.05□□□□□ -2.24
SHKBP1Q8TBC3 AC244090.1-201ENST00000441884 93 ntBASIC1.05□□□□□ -2.24
SHKBP1Q8TBC3 RNU6-1223P-201ENST00000517124 104 ntBASIC1.04□□□□□ -2.24
SHKBP1Q8TBC3 MIR5706-201ENST00000579841 80 ntBASIC1.04□□□□□ -2.24
SHKBP1Q8TBC3 MIR20A-201ENST00000362279 71 ntBASIC1.03□□□□□ -2.24
SHKBP1Q8TBC3 SNORD116-16-201ENST00000384533 92 ntBASIC1.03□□□□□ -2.24
SHKBP1Q8TBC3 MIR1255B2-201ENST00000408618 67 ntBASIC1.03□□□□□ -2.24
SHKBP1Q8TBC3 AL353765.1-201ENST00000605514 183 ntBASIC1.03□□□□□ -2.24
SHKBP1Q8TBC3 MIR519A2-201ENST00000384990 87 ntBASIC1.02□□□□□ -2.25
SHKBP1Q8TBC3 RNU6-980P-201ENST00000516925 103 ntBASIC1.02□□□□□ -2.25
SHKBP1Q8TBC3 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
SHKBP1Q8TBC3 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
SHKBP1Q8TBC3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
SHKBP1Q8TBC3 RNA5SP517-201ENST00000364724 117 ntBASIC1.01□□□□□ -2.25
SHKBP1Q8TBC3 Y_RNA.282-201ENST00000364793 102 ntBASIC1.01□□□□□ -2.25
SHKBP1Q8TBC3 RNY1P8-201ENST00000383970 114 ntBASIC1.01□□□□□ -2.25
SHKBP1Q8TBC3 MIR532-201ENST00000385025 91 ntBASIC1.01□□□□□ -2.25
SHKBP1Q8TBC3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.01□□□□□ -2.25
SHKBP1Q8TBC3 AC069271.1-201ENST00000445577 156 ntBASIC1.01□□□□□ -2.25
SHKBP1Q8TBC3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.01□□□□□ -2.25
SHKBP1Q8TBC3 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
SHKBP1Q8TBC3 RNU6-753P-201ENST00000363926 107 ntBASIC1□□□□□ -2.25
SHKBP1Q8TBC3 Y_RNA.540-201ENST00000384638 111 ntBASIC1□□□□□ -2.25
SHKBP1Q8TBC3 RNU6-337P-201ENST00000391243 106 ntBASIC1□□□□□ -2.25
SHKBP1Q8TBC3 MIR6515-201ENST00000619843 57 ntBASIC1□□□□□ -2.25
SHKBP1Q8TBC3 SNORA49-201ENST00000386157 136 ntBASIC0.99□□□□□ -2.25
SHKBP1Q8TBC3 SNORA40.16-201ENST00000517238 121 ntBASIC0.99□□□□□ -2.25
SHKBP1Q8TBC3 MIR527-201ENST00000385244 85 ntBASIC0.98□□□□□ -2.25
SHKBP1Q8TBC3 SNORD116.2-201ENST00000391251 93 ntBASIC0.98□□□□□ -2.25
SHKBP1Q8TBC3 MIR548AG1-201ENST00000579932 66 ntBASIC0.98□□□□□ -2.25
SHKBP1Q8TBC3 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
SHKBP1Q8TBC3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.97□□□□□ -2.25
SHKBP1Q8TBC3 SNORD2-201ENST00000459163 69 ntBASIC0.97□□□□□ -2.25
SHKBP1Q8TBC3 OR2A41P-201ENST00000473586 105 ntBASIC0.97□□□□□ -2.25
SHKBP1Q8TBC3 SNORA25.18-201ENST00000607153 114 ntBASIC0.97□□□□□ -2.25
SHKBP1Q8TBC3 MIR6773-201ENST00000612812 74 ntBASIC0.97□□□□□ -2.25
SHKBP1Q8TBC3 SNORD114-29-201ENST00000364819 70 ntBASIC0.96□□□□□ -2.26
SHKBP1Q8TBC3 SNORA36.2-201ENST00000384004 127 ntBASIC0.96□□□□□ -2.26
SHKBP1Q8TBC3 MIR140-201ENST00000385282 100 ntBASIC0.96□□□□□ -2.26
SHKBP1Q8TBC3 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
SHKBP1Q8TBC3 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
SHKBP1Q8TBC3 MIR7110-201ENST00000612638 86 ntBASIC0.96□□□□□ -2.26
SHKBP1Q8TBC3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.96□□□□□ -2.26
SHKBP1Q8TBC3 SNORD118-201ENST00000363593 134 ntBASIC0.95□□□□□ -2.26
SHKBP1Q8TBC3 RNA5SP436-201ENST00000516020 115 ntBASIC0.95□□□□□ -2.26
SHKBP1Q8TBC3 RNU7-188P-201ENST00000517063 64 ntBASIC0.95□□□□□ -2.26
SHKBP1Q8TBC3 CYP3A137P-201ENST00000562436 69 ntBASIC0.95□□□□□ -2.26
SHKBP1Q8TBC3 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.95□□□□□ -2.26
SHKBP1Q8TBC3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
SHKBP1Q8TBC3 SNORD115-25-201ENST00000362619 82 ntBASIC0.94□□□□□ -2.26
SHKBP1Q8TBC3 RNU7-154P-201ENST00000516194 62 ntBASIC0.94□□□□□ -2.26
SHKBP1Q8TBC3 RNU6-175P-201ENST00000516896 107 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms