Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
LMO3Q8TAP4 AL691482.2-201ENST00000457453 84 ntBASIC0.4□□□□□ -2.35
LMO3Q8TAP4 Y_RNA.681-201ENST00000516445 113 ntBASIC0.4□□□□□ -2.35
LMO3Q8TAP4 SNORA62.5-201ENST00000516634 120 ntBASIC0.4□□□□□ -2.35
LMO3Q8TAP4 SNORA40.17-201ENST00000517256 115 ntBASIC0.4□□□□□ -2.35
LMO3Q8TAP4 MIR1197-201ENST00000408818 88 ntBASIC0.39□□□□□ -2.35
LMO3Q8TAP4 SNORA68.3-201ENST00000515906 83 ntBASIC0.39□□□□□ -2.35
LMO3Q8TAP4 RNA5SP121-201ENST00000516537 101 ntBASIC0.39□□□□□ -2.35
LMO3Q8TAP4 U7.6-201ENST00000610841 64 ntBASIC0.39□□□□□ -2.35
LMO3Q8TAP4 MIR6509-201ENST00000614603 85 ntBASIC0.39□□□□□ -2.35
LMO3Q8TAP4 MIR664A-201ENST00000626086 82 ntBASIC0.39□□□□□ -2.35
LMO3Q8TAP4 Y_RNA.178-201ENST00000363832 102 ntBASIC0.38□□□□□ -2.35
LMO3Q8TAP4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.38□□□□□ -2.35
LMO3Q8TAP4 SNORA8.1-201ENST00000384250 140 ntBASIC0.38□□□□□ -2.35
LMO3Q8TAP4 SCARNA17.3-201ENST00000516381 125 ntBASIC0.38□□□□□ -2.35
LMO3Q8TAP4 RNU6-70P-201ENST00000516438 60 ntBASIC0.38□□□□□ -2.35
LMO3Q8TAP4 RNU6-687P-201ENST00000516443 89 ntBASIC0.38□□□□□ -2.35
LMO3Q8TAP4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.38□□□□□ -2.35
LMO3Q8TAP4 MIR103A1-201ENST00000362165 78 ntBASIC0.37□□□□□ -2.35
LMO3Q8TAP4 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
LMO3Q8TAP4 RNA5SP62-201ENST00000363457 110 ntBASIC0.37□□□□□ -2.35
LMO3Q8TAP4 MIR4473-201ENST00000583731 91 ntBASIC0.37□□□□□ -2.35
LMO3Q8TAP4 MIR548AD-201ENST00000584780 82 ntBASIC0.37□□□□□ -2.35
LMO3Q8TAP4 RNU6-990P-201ENST00000364385 104 ntBASIC0.36□□□□□ -2.35
LMO3Q8TAP4 RNA5SP128-201ENST00000365305 116 ntBASIC0.36□□□□□ -2.35
LMO3Q8TAP4 RNU6-411P-201ENST00000384451 107 ntBASIC0.36□□□□□ -2.35
LMO3Q8TAP4 MIR501-201ENST00000390204 84 ntBASIC0.36□□□□□ -2.35
LMO3Q8TAP4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
LMO3Q8TAP4 MIR4677-201ENST00000584153 80 ntBASIC0.36□□□□□ -2.35
LMO3Q8TAP4 MIR3657-201ENST00000584818 117 ntBASIC0.36□□□□□ -2.35
LMO3Q8TAP4 RNU6-1296P-201ENST00000383879 107 ntBASIC0.35□□□□□ -2.35
LMO3Q8TAP4 MIR203A-201ENST00000384836 110 ntBASIC0.35□□□□□ -2.35
LMO3Q8TAP4 MIR760-201ENST00000390220 80 ntBASIC0.35□□□□□ -2.35
LMO3Q8TAP4 MIR889-201ENST00000401280 79 ntBASIC0.35□□□□□ -2.35
LMO3Q8TAP4 SNORD45.1-201ENST00000363181 77 ntBASIC0.34□□□□□ -2.36
LMO3Q8TAP4 Y_RNA.633-201ENST00000459107 95 ntBASIC0.34□□□□□ -2.36
LMO3Q8TAP4 MIR3925-201ENST00000584674 77 ntBASIC0.34□□□□□ -2.36
LMO3Q8TAP4 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
LMO3Q8TAP4 SNORA2.1-201ENST00000363089 137 ntBASIC0.33□□□□□ -2.36
LMO3Q8TAP4 SNORD115-22-201ENST00000364456 82 ntBASIC0.33□□□□□ -2.36
LMO3Q8TAP4 RNU6-1241P-201ENST00000384536 107 ntBASIC0.33□□□□□ -2.36
LMO3Q8TAP4 Y_RNA.545-201ENST00000384652 105 ntBASIC0.33□□□□□ -2.36
LMO3Q8TAP4 RNU6-587P-201ENST00000391282 106 ntBASIC0.33□□□□□ -2.36
LMO3Q8TAP4 RNU6-1015P-201ENST00000517121 99 ntBASIC0.33□□□□□ -2.36
LMO3Q8TAP4 MIR499B-201ENST00000636498 73 ntBASIC0.33□□□□□ -2.36
LMO3Q8TAP4 MIR582-201ENST00000365731 98 ntBASIC0.32□□□□□ -2.36
LMO3Q8TAP4 RNU6-815P-201ENST00000384080 113 ntBASIC0.32□□□□□ -2.36
LMO3Q8TAP4 Y_RNA.433-201ENST00000384089 102 ntBASIC0.32□□□□□ -2.36
LMO3Q8TAP4 MIR516B1-201ENST00000385211 90 ntBASIC0.32□□□□□ -2.36
LMO3Q8TAP4 AC244090.1-201ENST00000441884 93 ntBASIC0.32□□□□□ -2.36
LMO3Q8TAP4 MIR4514-201ENST00000581410 57 ntBASIC0.32□□□□□ -2.36
LMO3Q8TAP4 MIR20A-201ENST00000362279 71 ntBASIC0.31□□□□□ -2.36
LMO3Q8TAP4 Y_RNA.250-201ENST00000364542 110 ntBASIC0.31□□□□□ -2.36
LMO3Q8TAP4 Y_RNA.565-201ENST00000384719 101 ntBASIC0.31□□□□□ -2.36
LMO3Q8TAP4 MIR548E-201ENST00000408287 88 ntBASIC0.31□□□□□ -2.36
LMO3Q8TAP4 AC108740.1-201ENST00000498629 225 ntBASIC0.31□□□□□ -2.36
LMO3Q8TAP4 MIR8053-201ENST00000613344 75 ntBASIC0.31□□□□□ -2.36
LMO3Q8TAP4 MIR6739-201ENST00000622461 75 ntBASIC0.31□□□□□ -2.36
LMO3Q8TAP4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
LMO3Q8TAP4 MIR876-201ENST00000401147 81 ntBASIC0.3□□□□□ -2.36
LMO3Q8TAP4 RNU6-175P-201ENST00000516896 107 ntBASIC0.3□□□□□ -2.36
LMO3Q8TAP4 AC069113.3-201ENST00000521019 150 ntBASIC0.3□□□□□ -2.36
LMO3Q8TAP4 SNORA9.1-201ENST00000362412 131 ntBASIC0.29□□□□□ -2.36
LMO3Q8TAP4 SNORD114-29-201ENST00000364819 70 ntBASIC0.29□□□□□ -2.36
LMO3Q8TAP4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.29□□□□□ -2.36
LMO3Q8TAP4 RNU6-634P-201ENST00000459134 106 ntBASIC0.29□□□□□ -2.36
LMO3Q8TAP4 RNU6-782P-201ENST00000516852 104 ntBASIC0.29□□□□□ -2.36
LMO3Q8TAP4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.29□□□□□ -2.36
LMO3Q8TAP4 AC084368.1-201ENST00000620935 65 ntBASIC0.29□□□□□ -2.36
LMO3Q8TAP4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.29□□□□□ -2.36
LMO3Q8TAP4 SNORD115-31-201ENST00000365318 82 ntBASIC0.28□□□□□ -2.36
LMO3Q8TAP4 RNU6-604P-201ENST00000390917 100 ntBASIC0.28□□□□□ -2.36
LMO3Q8TAP4 RNA5SP63-201ENST00000391225 112 ntBASIC0.28□□□□□ -2.36
LMO3Q8TAP4 RNU7-188P-201ENST00000517063 64 ntBASIC0.28□□□□□ -2.36
LMO3Q8TAP4 AC023932.2-201ENST00000603176 175 ntBASIC0.28□□□□□ -2.36
LMO3Q8TAP4 RN7SL660P-201ENST00000614852 299 ntBASIC0.28□□□□□ -2.36
LMO3Q8TAP4 SNORD113.1-201ENST00000363280 73 ntBASIC0.27□□□□□ -2.37
LMO3Q8TAP4 RNU6-540P-201ENST00000384622 101 ntBASIC0.27□□□□□ -2.37
LMO3Q8TAP4 MIR521-2-201ENST00000384818 87 ntBASIC0.27□□□□□ -2.37
LMO3Q8TAP4 MIR154-201ENST00000385243 84 ntBASIC0.27□□□□□ -2.37
LMO3Q8TAP4 RNU6-127P-201ENST00000390897 107 ntBASIC0.27□□□□□ -2.37
LMO3Q8TAP4 RNA5SP147-201ENST00000516493 109 ntBASIC0.27□□□□□ -2.37
LMO3Q8TAP4 SNORA63.6-201ENST00000364921 119 ntBASIC0.26□□□□□ -2.37
LMO3Q8TAP4 SNORA15B-2-201ENST00000384058 135 ntBASIC0.26□□□□□ -2.37
LMO3Q8TAP4 SNORA15B-1-201ENST00000384334 135 ntBASIC0.26□□□□□ -2.37
LMO3Q8TAP4 SNORD45A-201ENST00000384512 84 ntBASIC0.26□□□□□ -2.37
LMO3Q8TAP4 AC073261.1-201ENST00000429409 121 ntBASIC0.26□□□□□ -2.37
LMO3Q8TAP4 snoU13.13-201ENST00000458842 104 ntBASIC0.26□□□□□ -2.37
LMO3Q8TAP4 RNU6-656P-201ENST00000516785 107 ntBASIC0.26□□□□□ -2.37
LMO3Q8TAP4 MIR548H2-201ENST00000408874 88 ntBASIC0.25□□□□□ -2.37
LMO3Q8TAP4 RNU6-982P-201ENST00000516216 102 ntBASIC0.25□□□□□ -2.37
LMO3Q8TAP4 RNU6-881P-201ENST00000516813 102 ntBASIC0.25□□□□□ -2.37
LMO3Q8TAP4 SCARNA11.2-201ENST00000517183 154 ntBASIC0.25□□□□□ -2.37
LMO3Q8TAP4 MIR4315-1-201ENST00000636800 73 ntBASIC0.25□□□□□ -2.37
LMO3Q8TAP4 MIR4315-2-201ENST00000640925 73 ntBASIC0.25□□□□□ -2.37
LMO3Q8TAP4 RNU6-645P-201ENST00000364649 106 ntBASIC0.24□□□□□ -2.37
LMO3Q8TAP4 SNORD116-24-201ENST00000384549 92 ntBASIC0.24□□□□□ -2.37
LMO3Q8TAP4 MIR106A-201ENST00000384870 81 ntBASIC0.24□□□□□ -2.37
LMO3Q8TAP4 SNORA49-201ENST00000386157 136 ntBASIC0.24□□□□□ -2.37
LMO3Q8TAP4 SNORD2-201ENST00000459163 69 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 1873.4 ms