Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RNU6-1108P-201ENST00000516308 104 ntBASIC0.22□□□□□ -2.37
SMC1BQ8NDV3 MIR4773-1-201ENST00000637203 78 ntBASIC0.22□□□□□ -2.37
SMC1BQ8NDV3 RNU6-161P-201ENST00000363051 106 ntBASIC0.21□□□□□ -2.38
SMC1BQ8NDV3 RNU6-681P-201ENST00000364012 104 ntBASIC0.21□□□□□ -2.38
SMC1BQ8NDV3 SNORD73B-201ENST00000364394 72 ntBASIC0.21□□□□□ -2.38
SMC1BQ8NDV3 MIR652-201ENST00000385278 98 ntBASIC0.21□□□□□ -2.38
SMC1BQ8NDV3 RNU6-129P-201ENST00000391022 107 ntBASIC0.21□□□□□ -2.38
SMC1BQ8NDV3 RNU6-274P-201ENST00000459566 107 ntBASIC0.21□□□□□ -2.38
SMC1BQ8NDV3 SCARNA17.3-201ENST00000516381 125 ntBASIC0.21□□□□□ -2.38
SMC1BQ8NDV3 RNU6-557P-201ENST00000516842 110 ntBASIC0.21□□□□□ -2.38
SMC1BQ8NDV3 SCARNA11.2-201ENST00000517183 154 ntBASIC0.21□□□□□ -2.38
SMC1BQ8NDV3 MIR20A-201ENST00000362279 71 ntBASIC0.2□□□□□ -2.38
SMC1BQ8NDV3 SNORD114-31-201ENST00000363219 75 ntBASIC0.2□□□□□ -2.38
SMC1BQ8NDV3 SNORA42.1-201ENST00000363515 137 ntBASIC0.2□□□□□ -2.38
SMC1BQ8NDV3 RNU6-824P-201ENST00000363724 104 ntBASIC0.2□□□□□ -2.38
SMC1BQ8NDV3 RNU6-382P-201ENST00000365181 106 ntBASIC0.2□□□□□ -2.38
SMC1BQ8NDV3 MIR604-201ENST00000384880 94 ntBASIC0.2□□□□□ -2.38
SMC1BQ8NDV3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.2□□□□□ -2.38
SMC1BQ8NDV3 RNU7-171P-201ENST00000459581 62 ntBASIC0.2□□□□□ -2.38
SMC1BQ8NDV3 RNA5SP67-201ENST00000516422 131 ntBASIC0.2□□□□□ -2.38
SMC1BQ8NDV3 MIR3925-201ENST00000584674 77 ntBASIC0.2□□□□□ -2.38
SMC1BQ8NDV3 U6.81-201ENST00000612550 106 ntBASIC0.2□□□□□ -2.38
SMC1BQ8NDV3 SNORD42B-201ENST00000458893 67 ntBASIC0.19□□□□□ -2.38
SMC1BQ8NDV3 RNU7-188P-201ENST00000517063 64 ntBASIC0.19□□□□□ -2.38
SMC1BQ8NDV3 AP001180.6-201ENST00000584918 159 ntBASIC0.19□□□□□ -2.38
SMC1BQ8NDV3 AC062037.1-201ENST00000605302 128 ntBASIC0.19□□□□□ -2.38
SMC1BQ8NDV3 MIR371B-201ENST00000638082 66 ntBASIC0.19□□□□□ -2.38
SMC1BQ8NDV3 Y_RNA.371-201ENST00000365591 113 ntBASIC0.18□□□□□ -2.38
SMC1BQ8NDV3 MIR876-201ENST00000401147 81 ntBASIC0.18□□□□□ -2.38
SMC1BQ8NDV3 RNU6-380P-201ENST00000410207 107 ntBASIC0.18□□□□□ -2.38
SMC1BQ8NDV3 Y_RNA.606-201ENST00000410579 103 ntBASIC0.18□□□□□ -2.38
SMC1BQ8NDV3 MIR4743-201ENST00000584576 69 ntBASIC0.18□□□□□ -2.38
SMC1BQ8NDV3 AC108676.2-201ENST00000605225 163 ntBASIC0.18□□□□□ -2.38
SMC1BQ8NDV3 AC104408.1-201ENST00000605241 170 ntBASIC0.18□□□□□ -2.38
SMC1BQ8NDV3 Y_RNA.12-201ENST00000362393 112 ntBASIC0.17□□□□□ -2.38
SMC1BQ8NDV3 RNA5SP214-201ENST00000363378 118 ntBASIC0.17□□□□□ -2.38
SMC1BQ8NDV3 RNU6-1276P-201ENST00000365372 104 ntBASIC0.17□□□□□ -2.38
SMC1BQ8NDV3 SNORA26.2-201ENST00000390922 122 ntBASIC0.17□□□□□ -2.38
SMC1BQ8NDV3 AC244090.1-201ENST00000441884 93 ntBASIC0.17□□□□□ -2.38
SMC1BQ8NDV3 YWHAEP3-201ENST00000582767 121 ntBASIC0.17□□□□□ -2.38
SMC1BQ8NDV3 RNU6-686P-201ENST00000364839 107 ntBASIC0.16□□□□□ -2.38
SMC1BQ8NDV3 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
SMC1BQ8NDV3 RNU6-340P-201ENST00000364005 107 ntBASIC0.15□□□□□ -2.39
SMC1BQ8NDV3 MIR1302-4-201ENST00000408701 150 ntBASIC0.15□□□□□ -2.39
SMC1BQ8NDV3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.15□□□□□ -2.39
SMC1BQ8NDV3 AL691482.2-201ENST00000457453 84 ntBASIC0.14□□□□□ -2.39
SMC1BQ8NDV3 AC104692.1-201ENST00000472406 90 ntBASIC0.14□□□□□ -2.39
SMC1BQ8NDV3 SNORD114-9-201ENST00000364370 72 ntBASIC0.13□□□□□ -2.39
SMC1BQ8NDV3 RNA5SP266-201ENST00000410273 108 ntBASIC0.13□□□□□ -2.39
SMC1BQ8NDV3 RNU6-752P-201ENST00000516376 102 ntBASIC0.13□□□□□ -2.39
SMC1BQ8NDV3 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.13□□□□□ -2.39
SMC1BQ8NDV3 SNORD95.1-201ENST00000364099 68 ntBASIC0.12□□□□□ -2.39
SMC1BQ8NDV3 Y_RNA.316-201ENST00000365118 111 ntBASIC0.12□□□□□ -2.39
SMC1BQ8NDV3 RNU6-1152P-201ENST00000384576 107 ntBASIC0.12□□□□□ -2.39
SMC1BQ8NDV3 MIR593-201ENST00000384856 100 ntBASIC0.12□□□□□ -2.39
SMC1BQ8NDV3 RNY4P29-201ENST00000410801 97 ntBASIC0.12□□□□□ -2.39
SMC1BQ8NDV3 SNORD2-201ENST00000459163 69 ntBASIC0.12□□□□□ -2.39
SMC1BQ8NDV3 RNU6-315P-201ENST00000362666 107 ntBASIC0.11□□□□□ -2.39
SMC1BQ8NDV3 RNU6-1039P-201ENST00000383931 107 ntBASIC0.11□□□□□ -2.39
SMC1BQ8NDV3 MIR145-201ENST00000384967 88 ntBASIC0.11□□□□□ -2.39
SMC1BQ8NDV3 MIRLET7A1-201ENST00000362295 80 ntBASIC0.1□□□□□ -2.39
SMC1BQ8NDV3 RNU6-478P-201ENST00000363904 110 ntBASIC0.1□□□□□ -2.39
SMC1BQ8NDV3 RNA5SP163-201ENST00000410304 99 ntBASIC0.1□□□□□ -2.39
SMC1BQ8NDV3 MIR6509-201ENST00000614603 85 ntBASIC0.1□□□□□ -2.39
SMC1BQ8NDV3 MIR6514-201ENST00000622549 70 ntBASIC0.1□□□□□ -2.39
SMC1BQ8NDV3 Y_RNA.610-201ENST00000410681 103 ntBASIC0.09□□□□□ -2.4
SMC1BQ8NDV3 RNU7-159P-201ENST00000459284 62 ntBASIC0.09□□□□□ -2.4
SMC1BQ8NDV3 RNU6-303P-201ENST00000517091 106 ntBASIC0.09□□□□□ -2.4
SMC1BQ8NDV3 CR383656.4-201ENST00000546909 122 ntBASIC0.09□□□□□ -2.4
SMC1BQ8NDV3 RN7SL660P-201ENST00000614852 299 ntBASIC0.09□□□□□ -2.4
SMC1BQ8NDV3 MIR4679-1-201ENST00000637619 75 ntBASIC0.09□□□□□ -2.4
SMC1BQ8NDV3 SNORD114-5-201ENST00000362928 70 ntBASIC0.08□□□□□ -2.4
SMC1BQ8NDV3 MIR548H2-201ENST00000408874 88 ntBASIC0.08□□□□□ -2.4
SMC1BQ8NDV3 MIR4666B-201ENST00000578142 81 ntBASIC0.08□□□□□ -2.4
SMC1BQ8NDV3 RNU6-260P-201ENST00000384092 107 ntBASIC0.07□□□□□ -2.4
SMC1BQ8NDV3 RNU6-807P-201ENST00000516805 107 ntBASIC0.07□□□□□ -2.4
SMC1BQ8NDV3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
SMC1BQ8NDV3 MIR1297-201ENST00000637311 77 ntBASIC0.07□□□□□ -2.4
SMC1BQ8NDV3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.06□□□□□ -2.4
SMC1BQ8NDV3 Y_RNA.457-201ENST00000384237 111 ntBASIC0.06□□□□□ -2.4
SMC1BQ8NDV3 MIR106A-201ENST00000384870 81 ntBASIC0.06□□□□□ -2.4
SMC1BQ8NDV3 RNU6-175P-201ENST00000516896 107 ntBASIC0.06□□□□□ -2.4
SMC1BQ8NDV3 MIR1245B-201ENST00000636115 69 ntBASIC0.06□□□□□ -2.4
SMC1BQ8NDV3 MIR148A-201ENST00000362215 68 ntBASIC0.05□□□□□ -2.4
SMC1BQ8NDV3 RNU6-1094P-201ENST00000362416 104 ntBASIC0.05□□□□□ -2.4
SMC1BQ8NDV3 SNORA63.6-201ENST00000364921 119 ntBASIC0.05□□□□□ -2.4
SMC1BQ8NDV3 MIR548E-201ENST00000408287 88 ntBASIC0.05□□□□□ -2.4
SMC1BQ8NDV3 RNU6-180P-201ENST00000516697 61 ntBASIC0.05□□□□□ -2.4
SMC1BQ8NDV3 MIR4723-201ENST00000585070 81 ntBASIC0.05□□□□□ -2.4
SMC1BQ8NDV3 RNU6-990P-201ENST00000364385 104 ntBASIC0.04□□□□□ -2.4
SMC1BQ8NDV3 MIR582-201ENST00000365731 98 ntBASIC0.04□□□□□ -2.4
SMC1BQ8NDV3 RNU6-1036P-201ENST00000383959 104 ntBASIC0.04□□□□□ -2.4
SMC1BQ8NDV3 MIR3202-2-201ENST00000635980 79 ntBASIC0.04□□□□□ -2.4
SMC1BQ8NDV3 MIR101-1-201ENST00000362265 75 ntBASIC0.03□□□□□ -2.4
SMC1BQ8NDV3 RNA5SP173-201ENST00000364857 136 ntBASIC0.03□□□□□ -2.4
SMC1BQ8NDV3 Y_RNA.388-201ENST00000383919 113 ntBASIC0.03□□□□□ -2.4
SMC1BQ8NDV3 MIR203A-201ENST00000384836 110 ntBASIC0.03□□□□□ -2.4
SMC1BQ8NDV3 RNU7-165P-201ENST00000458864 60 ntBASIC0.03□□□□□ -2.4
SMC1BQ8NDV3 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
SMC1BQ8NDV3 AC021146.9-201ENST00000512503 156 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms