Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 RNU6-109P-201ENST00000516364 107 ntBASIC-0.83□□□□□ -2.54
SKA3Q8IX90 RNU6-184P-201ENST00000516514 107 ntBASIC-0.83□□□□□ -2.54
SKA3Q8IX90 MIR6509-201ENST00000614603 85 ntBASIC-0.83□□□□□ -2.54
SKA3Q8IX90 U7.3-201ENST00000616123 62 ntBASIC-0.83□□□□□ -2.54
SKA3Q8IX90 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.83□□□□□ -2.54
SKA3Q8IX90 MIR203A-201ENST00000384836 110 ntBASIC-0.84□□□□□ -2.54
SKA3Q8IX90 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.84□□□□□ -2.54
SKA3Q8IX90 RNU6-274P-201ENST00000459566 107 ntBASIC-0.84□□□□□ -2.54
SKA3Q8IX90 RNA5SP147-201ENST00000516493 109 ntBASIC-0.84□□□□□ -2.54
SKA3Q8IX90 RNU6-81P-201ENST00000365608 104 ntBASIC-0.85□□□□□ -2.55
SKA3Q8IX90 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.85□□□□□ -2.55
SKA3Q8IX90 MIR1236-201ENST00000408340 102 ntBASIC-0.85□□□□□ -2.55
SKA3Q8IX90 RNU6-721P-201ENST00000410155 105 ntBASIC-0.85□□□□□ -2.55
SKA3Q8IX90 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.85□□□□□ -2.55
SKA3Q8IX90 RNU6-881P-201ENST00000516813 102 ntBASIC-0.85□□□□□ -2.55
SKA3Q8IX90 U6.81-201ENST00000612550 106 ntBASIC-0.85□□□□□ -2.55
SKA3Q8IX90 SNORA2.1-201ENST00000363089 137 ntBASIC-0.86□□□□□ -2.55
SKA3Q8IX90 RNU6-260P-201ENST00000384092 107 ntBASIC-0.86□□□□□ -2.55
SKA3Q8IX90 RNU6-905P-201ENST00000384434 107 ntBASIC-0.86□□□□□ -2.55
SKA3Q8IX90 RNU6-35P-201ENST00000384530 107 ntBASIC-0.86□□□□□ -2.55
SKA3Q8IX90 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.86□□□□□ -2.55
SKA3Q8IX90 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.87□□□□□ -2.55
SKA3Q8IX90 MIR548M-201ENST00000408260 86 ntBASIC-0.87□□□□□ -2.55
SKA3Q8IX90 AP000533.3-201ENST00000447704 118 ntBASIC-0.87□□□□□ -2.55
SKA3Q8IX90 AL691482.2-201ENST00000457453 84 ntBASIC-0.87□□□□□ -2.55
SKA3Q8IX90 AC022137.1-201ENST00000483735 151 ntBASIC-0.87□□□□□ -2.55
SKA3Q8IX90 RNU6-589P-201ENST00000516485 107 ntBASIC-0.87□□□□□ -2.55
SKA3Q8IX90 MIR3657-201ENST00000584818 117 ntBASIC-0.87□□□□□ -2.55
SKA3Q8IX90 AC090617.8-201ENST00000623339 167 ntBASIC-0.87□□□□□ -2.55
SKA3Q8IX90 RNU6-766P-201ENST00000362478 107 ntBASIC-0.88□□□□□ -2.55
SKA3Q8IX90 SNORD74.6-201ENST00000364796 70 ntBASIC-0.89□□□□□ -2.55
SKA3Q8IX90 SNORA33.1-201ENST00000364957 130 ntBASIC-0.89□□□□□ -2.55
SKA3Q8IX90 MIR517B-201ENST00000385102 67 ntBASIC-0.89□□□□□ -2.55
SKA3Q8IX90 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.89□□□□□ -2.55
SKA3Q8IX90 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.89□□□□□ -2.55
SKA3Q8IX90 RNU6-758P-201ENST00000516292 89 ntBASIC-0.89□□□□□ -2.55
SKA3Q8IX90 YWHAEP3-201ENST00000582767 121 ntBASIC-0.89□□□□□ -2.55
SKA3Q8IX90 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.89□□□□□ -2.55
SKA3Q8IX90 RNU6-834P-201ENST00000362367 110 ntBASIC-0.9□□□□□ -2.55
SKA3Q8IX90 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.9□□□□□ -2.55
SKA3Q8IX90 SNORA62.4-201ENST00000365504 151 ntBASIC-0.9□□□□□ -2.55
SKA3Q8IX90 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.9□□□□□ -2.55
SKA3Q8IX90 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.9□□□□□ -2.55
SKA3Q8IX90 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.9□□□□□ -2.55
SKA3Q8IX90 AC108676.2-201ENST00000605225 163 ntBASIC-0.9□□□□□ -2.55
SKA3Q8IX90 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 SNORD95.1-201ENST00000364099 68 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 RNU6-22P-201ENST00000384355 107 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 MIR224-201ENST00000384889 81 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 Z95118.1-201ENST00000421372 247 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 RNU7-153P-201ENST00000516455 62 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 AL353803.5-201ENST00000599815 141 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.92□□□□□ -2.56
SKA3Q8IX90 SNORD115-27-201ENST00000364430 82 ntBASIC-0.92□□□□□ -2.56
SKA3Q8IX90 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.92□□□□□ -2.56
SKA3Q8IX90 AL450471.1-201ENST00000447509 127 ntBASIC-0.92□□□□□ -2.56
SKA3Q8IX90 RNU6-208P-201ENST00000362431 107 ntBASIC-0.93□□□□□ -2.56
SKA3Q8IX90 RNU6-158P-201ENST00000517104 100 ntBASIC-0.93□□□□□ -2.56
SKA3Q8IX90 MIR124-2-201ENST00000385081 109 ntBASIC-0.94□□□□□ -2.56
SKA3Q8IX90 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.94□□□□□ -2.56
SKA3Q8IX90 MIR1265-201ENST00000408444 86 ntBASIC-0.94□□□□□ -2.56
SKA3Q8IX90 SNORD18.2-201ENST00000459604 70 ntBASIC-0.94□□□□□ -2.56
SKA3Q8IX90 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.94□□□□□ -2.56
SKA3Q8IX90 MIR519C-201ENST00000385053 87 ntBASIC-0.95□□□□□ -2.56
SKA3Q8IX90 MT-TQ-201ENST00000387372 72 ntBASIC-0.95□□□□□ -2.56
SKA3Q8IX90 MIR1255B2-201ENST00000408618 67 ntBASIC-0.95□□□□□ -2.56
SKA3Q8IX90 RNU4-63P-201ENST00000411313 118 ntBASIC-0.95□□□□□ -2.56
SKA3Q8IX90 MTATP8P2-201ENST00000435212 202 ntBASIC-0.95□□□□□ -2.56
SKA3Q8IX90 RNU6-313P-201ENST00000516317 112 ntBASIC-0.95□□□□□ -2.56
SKA3Q8IX90 RNU6-752P-201ENST00000516376 102 ntBASIC-0.95□□□□□ -2.56
SKA3Q8IX90 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.96□□□□□ -2.56
SKA3Q8IX90 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.96□□□□□ -2.56
SKA3Q8IX90 AL031737.1-201ENST00000450125 223 ntBASIC-0.96□□□□□ -2.56
SKA3Q8IX90 RNU6-479P-201ENST00000516348 105 ntBASIC-0.96□□□□□ -2.56
SKA3Q8IX90 RNA5SP395-201ENST00000516567 118 ntBASIC-0.96□□□□□ -2.56
SKA3Q8IX90 MIR450A1-201ENST00000362262 91 ntBASIC-0.97□□□□□ -2.56
SKA3Q8IX90 RNY1P7-201ENST00000384743 110 ntBASIC-0.97□□□□□ -2.56
SKA3Q8IX90 RNA5SP25-201ENST00000410815 110 ntBASIC-0.97□□□□□ -2.56
SKA3Q8IX90 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.97□□□□□ -2.56
SKA3Q8IX90 RNA5SP470-201ENST00000516463 106 ntBASIC-0.97□□□□□ -2.56
SKA3Q8IX90 MIR3681-201ENST00000580089 72 ntBASIC-0.97□□□□□ -2.56
SKA3Q8IX90 MIR4464-201ENST00000580818 92 ntBASIC-0.97□□□□□ -2.56
SKA3Q8IX90 SNORD77.2-201ENST00000391045 68 ntBASIC-0.98□□□□□ -2.57
SKA3Q8IX90 MIR2052-201ENST00000636055 55 ntBASIC-0.98□□□□□ -2.57
SKA3Q8IX90 CYP3A54P-201ENST00000566950 75 ntBASIC-0.99□□□□□ -2.57
SKA3Q8IX90 MIR4668-201ENST00000582284 70 ntBASIC-0.99□□□□□ -2.57
SKA3Q8IX90 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
SKA3Q8IX90 SNORD114-25-201ENST00000363742 72 ntBASIC-1□□□□□ -2.57
SKA3Q8IX90 SNORD115-37-201ENST00000363768 82 ntBASIC-1□□□□□ -2.57
SKA3Q8IX90 RNU6-340P-201ENST00000364005 107 ntBASIC-1□□□□□ -2.57
SKA3Q8IX90 MIR521-2-201ENST00000384818 87 ntBASIC-1□□□□□ -2.57
SKA3Q8IX90 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1□□□□□ -2.57
SKA3Q8IX90 RNU6-1246P-201ENST00000391064 107 ntBASIC-1□□□□□ -2.57
SKA3Q8IX90 AC132825.6-201ENST00000638861 357 ntBASIC-1□□□□□ -2.57
SKA3Q8IX90 RNU6-681P-201ENST00000364012 104 ntBASIC-1.01□□□□□ -2.57
SKA3Q8IX90 RNA5SP368-201ENST00000364298 116 ntBASIC-1.01□□□□□ -2.57
SKA3Q8IX90 MIR196A1-201ENST00000388006 70 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms