Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
ATG4DQ86TL0 RNU6-753P-201ENST00000363926 107 ntBASIC1.07□□□□□ -2.24
ATG4DQ86TL0 MIR499A-201ENST00000384903 122 ntBASIC1.07□□□□□ -2.24
ATG4DQ86TL0 RNU6-231P-201ENST00000517122 103 ntBASIC1.07□□□□□ -2.24
ATG4DQ86TL0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
ATG4DQ86TL0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.05□□□□□ -2.24
ATG4DQ86TL0 MIR26B-201ENST00000362251 77 ntBASIC1.05□□□□□ -2.24
ATG4DQ86TL0 SNORD114-24-201ENST00000365029 72 ntBASIC1.05□□□□□ -2.24
ATG4DQ86TL0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ATG4DQ86TL0 SNORD116.2-201ENST00000391251 93 ntBASIC1.05□□□□□ -2.24
ATG4DQ86TL0 RNA5SP222-201ENST00000411039 105 ntBASIC1.05□□□□□ -2.24
ATG4DQ86TL0 HMGN2P22-201ENST00000427588 175 ntBASIC1.05□□□□□ -2.24
ATG4DQ86TL0 RNU7-119P-201ENST00000459279 63 ntBASIC1.05□□□□□ -2.24
ATG4DQ86TL0 AC243829.6-201ENST00000612652 106 ntBASIC1.05□□□□□ -2.24
ATG4DQ86TL0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
ATG4DQ86TL0 MIR1255B2-201ENST00000408618 67 ntBASIC1.04□□□□□ -2.24
ATG4DQ86TL0 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
ATG4DQ86TL0 RNY1P8-201ENST00000383970 114 ntBASIC1.03□□□□□ -2.24
ATG4DQ86TL0 MIR519A2-201ENST00000384990 87 ntBASIC1.03□□□□□ -2.24
ATG4DQ86TL0 MIR618-201ENST00000385287 98 ntBASIC1.03□□□□□ -2.24
ATG4DQ86TL0 AL021921.1-201ENST00000442774 93 ntBASIC1.03□□□□□ -2.24
ATG4DQ86TL0 Y_RNA.74-201ENST00000362911 99 ntBASIC1.02□□□□□ -2.25
ATG4DQ86TL0 Y_RNA.224-201ENST00000364308 111 ntBASIC1.02□□□□□ -2.25
ATG4DQ86TL0 SNORD114-22-201ENST00000365423 72 ntBASIC1.02□□□□□ -2.25
ATG4DQ86TL0 MIR527-201ENST00000385244 85 ntBASIC1.02□□□□□ -2.25
ATG4DQ86TL0 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
ATG4DQ86TL0 RNU6-980P-201ENST00000516925 103 ntBASIC1.02□□□□□ -2.25
ATG4DQ86TL0 MIR548AG1-201ENST00000579932 66 ntBASIC1.02□□□□□ -2.25
ATG4DQ86TL0 Y_RNA.282-201ENST00000364793 102 ntBASIC1.01□□□□□ -2.25
ATG4DQ86TL0 SNORD116-16-201ENST00000384533 92 ntBASIC1.01□□□□□ -2.25
ATG4DQ86TL0 AC069271.1-201ENST00000445577 156 ntBASIC1.01□□□□□ -2.25
ATG4DQ86TL0 RNU1-29P-201ENST00000606574 126 ntBASIC1.01□□□□□ -2.25
ATG4DQ86TL0 MIR6504-201ENST00000613520 61 ntBASIC1.01□□□□□ -2.25
ATG4DQ86TL0 MIR6767-201ENST00000637302 66 ntBASIC1.01□□□□□ -2.25
ATG4DQ86TL0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
ATG4DQ86TL0 RNU1-124P-201ENST00000363861 145 ntBASIC1□□□□□ -2.25
ATG4DQ86TL0 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1□□□□□ -2.25
ATG4DQ86TL0 SNORA40.16-201ENST00000517238 121 ntBASIC1□□□□□ -2.25
ATG4DQ86TL0 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1□□□□□ -2.25
ATG4DQ86TL0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
ATG4DQ86TL0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.99□□□□□ -2.25
ATG4DQ86TL0 AC243829.3-201ENST00000622177 108 ntBASIC0.99□□□□□ -2.25
ATG4DQ86TL0 MIR20A-201ENST00000362279 71 ntBASIC0.98□□□□□ -2.25
ATG4DQ86TL0 RNA5SP517-201ENST00000364724 117 ntBASIC0.98□□□□□ -2.25
ATG4DQ86TL0 RNU4-45P-201ENST00000365469 141 ntBASIC0.98□□□□□ -2.25
ATG4DQ86TL0 RNU6-35P-201ENST00000384530 107 ntBASIC0.98□□□□□ -2.25
ATG4DQ86TL0 RNU6-337P-201ENST00000391243 106 ntBASIC0.98□□□□□ -2.25
ATG4DQ86TL0 AC244090.1-201ENST00000441884 93 ntBASIC0.98□□□□□ -2.25
ATG4DQ86TL0 MIR7110-201ENST00000612638 86 ntBASIC0.98□□□□□ -2.25
ATG4DQ86TL0 SNORA36.2-201ENST00000384004 127 ntBASIC0.97□□□□□ -2.25
ATG4DQ86TL0 MIR4452-201ENST00000583004 71 ntBASIC0.97□□□□□ -2.25
ATG4DQ86TL0 SNORA25.18-201ENST00000607153 114 ntBASIC0.97□□□□□ -2.25
ATG4DQ86TL0 RNU6-810P-201ENST00000364001 107 ntBASIC0.96□□□□□ -2.26
ATG4DQ86TL0 RNU4-33P-201ENST00000364316 85 ntBASIC0.96□□□□□ -2.26
ATG4DQ86TL0 RNU1-93P-201ENST00000364704 169 ntBASIC0.96□□□□□ -2.26
ATG4DQ86TL0 Y_RNA.355-201ENST00000365462 98 ntBASIC0.95□□□□□ -2.26
ATG4DQ86TL0 RNU6-1232P-201ENST00000516299 86 ntBASIC0.95□□□□□ -2.26
ATG4DQ86TL0 MIR4295-201ENST00000585286 85 ntBASIC0.95□□□□□ -2.26
ATG4DQ86TL0 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
ATG4DQ86TL0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.94□□□□□ -2.26
ATG4DQ86TL0 SNORD1B-201ENST00000363091 84 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 Y_RNA.109-201ENST00000363215 102 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 MIR520E-201ENST00000384867 87 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 SNORA49-201ENST00000386157 136 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
ATG4DQ86TL0 AC087343.1-201ENST00000477341 475 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 ACA64.5-201ENST00000516207 127 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 RNU7-188P-201ENST00000517063 64 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 MIR5706-201ENST00000579841 80 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 AL353765.1-201ENST00000605514 183 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 MIR6773-201ENST00000612812 74 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 MIR7111-201ENST00000619751 72 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.94□□□□□ -2.26
ATG4DQ86TL0 SNORD115-25-201ENST00000362619 82 ntBASIC0.93□□□□□ -2.26
ATG4DQ86TL0 RNU6-246P-201ENST00000384702 107 ntBASIC0.93□□□□□ -2.26
ATG4DQ86TL0 RNU6-172P-201ENST00000411000 93 ntBASIC0.93□□□□□ -2.26
ATG4DQ86TL0 RPS29P1-201ENST00000465274 159 ntBASIC0.93□□□□□ -2.26
ATG4DQ86TL0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
ATG4DQ86TL0 Y_RNA.118-201ENST00000363300 101 ntBASIC0.92□□□□□ -2.26
ATG4DQ86TL0 Y_RNA.423-201ENST00000384057 113 ntBASIC0.92□□□□□ -2.26
ATG4DQ86TL0 SNORA40B-201ENST00000385573 128 ntBASIC0.92□□□□□ -2.26
ATG4DQ86TL0 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.92□□□□□ -2.26
ATG4DQ86TL0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
ATG4DQ86TL0 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
ATG4DQ86TL0 SNORD114-29-201ENST00000364819 70 ntBASIC0.91□□□□□ -2.26
ATG4DQ86TL0 OR2A41P-201ENST00000473586 105 ntBASIC0.91□□□□□ -2.26
ATG4DQ86TL0 RNU6-229P-201ENST00000516614 102 ntBASIC0.91□□□□□ -2.26
ATG4DQ86TL0 RNU6-175P-201ENST00000516896 107 ntBASIC0.91□□□□□ -2.26
ATG4DQ86TL0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.9□□□□□ -2.26
ATG4DQ86TL0 RNU6-930P-201ENST00000390938 100 ntBASIC0.9□□□□□ -2.27
ATG4DQ86TL0 MIR548X-201ENST00000580069 75 ntBASIC0.9□□□□□ -2.27
ATG4DQ86TL0 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
ATG4DQ86TL0 SNORA2A-201ENST00000383885 135 ntBASIC0.89□□□□□ -2.27
ATG4DQ86TL0 RNU6-1036P-201ENST00000383959 104 ntBASIC0.89□□□□□ -2.27
ATG4DQ86TL0 MIR140-201ENST00000385282 100 ntBASIC0.89□□□□□ -2.27
ATG4DQ86TL0 RNU7-154P-201ENST00000516194 62 ntBASIC0.88□□□□□ -2.27
ATG4DQ86TL0 RNU4-54P-201ENST00000516428 129 ntBASIC0.88□□□□□ -2.27
ATG4DQ86TL0 RNU6-782P-201ENST00000516852 104 ntBASIC0.88□□□□□ -2.27
ATG4DQ86TL0 MIR4490-201ENST00000582647 84 ntBASIC0.88□□□□□ -2.27
ATG4DQ86TL0 MIR373-201ENST00000362273 69 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms