Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
ATG4DQ86TL0 RNU6-753P-201ENST00000363926 107 ntBASIC1.07□□□□□ -2.24
ATG4DQ86TL0 MIR499A-201ENST00000384903 122 ntBASIC1.07□□□□□ -2.24
ATG4DQ86TL0 RNU6-231P-201ENST00000517122 103 ntBASIC1.07□□□□□ -2.24
ATG4DQ86TL0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
ATG4DQ86TL0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.05□□□□□ -2.24
ATG4DQ86TL0 MIR26B-201ENST00000362251 77 ntBASIC1.05□□□□□ -2.24
ATG4DQ86TL0 SNORD114-24-201ENST00000365029 72 ntBASIC1.05□□□□□ -2.24
ATG4DQ86TL0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ATG4DQ86TL0 SNORD116.2-201ENST00000391251 93 ntBASIC1.05□□□□□ -2.24
ATG4DQ86TL0 RNA5SP222-201ENST00000411039 105 ntBASIC1.05□□□□□ -2.24
ATG4DQ86TL0 HMGN2P22-201ENST00000427588 175 ntBASIC1.05□□□□□ -2.24
ATG4DQ86TL0 RNU7-119P-201ENST00000459279 63 ntBASIC1.05□□□□□ -2.24
ATG4DQ86TL0 AC243829.6-201ENST00000612652 106 ntBASIC1.05□□□□□ -2.24
ATG4DQ86TL0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
ATG4DQ86TL0 MIR1255B2-201ENST00000408618 67 ntBASIC1.04□□□□□ -2.24
ATG4DQ86TL0 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
ATG4DQ86TL0 RNY1P8-201ENST00000383970 114 ntBASIC1.03□□□□□ -2.24
ATG4DQ86TL0 MIR519A2-201ENST00000384990 87 ntBASIC1.03□□□□□ -2.24
ATG4DQ86TL0 MIR618-201ENST00000385287 98 ntBASIC1.03□□□□□ -2.24
ATG4DQ86TL0 AL021921.1-201ENST00000442774 93 ntBASIC1.03□□□□□ -2.24
ATG4DQ86TL0 Y_RNA.74-201ENST00000362911 99 ntBASIC1.02□□□□□ -2.25
ATG4DQ86TL0 Y_RNA.224-201ENST00000364308 111 ntBASIC1.02□□□□□ -2.25
ATG4DQ86TL0 SNORD114-22-201ENST00000365423 72 ntBASIC1.02□□□□□ -2.25
ATG4DQ86TL0 MIR527-201ENST00000385244 85 ntBASIC1.02□□□□□ -2.25
ATG4DQ86TL0 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
ATG4DQ86TL0 RNU6-980P-201ENST00000516925 103 ntBASIC1.02□□□□□ -2.25
ATG4DQ86TL0 MIR548AG1-201ENST00000579932 66 ntBASIC1.02□□□□□ -2.25
ATG4DQ86TL0 Y_RNA.282-201ENST00000364793 102 ntBASIC1.01□□□□□ -2.25
ATG4DQ86TL0 SNORD116-16-201ENST00000384533 92 ntBASIC1.01□□□□□ -2.25
ATG4DQ86TL0 AC069271.1-201ENST00000445577 156 ntBASIC1.01□□□□□ -2.25
ATG4DQ86TL0 RNU1-29P-201ENST00000606574 126 ntBASIC1.01□□□□□ -2.25
ATG4DQ86TL0 MIR6504-201ENST00000613520 61 ntBASIC1.01□□□□□ -2.25
ATG4DQ86TL0 MIR6767-201ENST00000637302 66 ntBASIC1.01□□□□□ -2.25
ATG4DQ86TL0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
ATG4DQ86TL0 RNU1-124P-201ENST00000363861 145 ntBASIC1□□□□□ -2.25
ATG4DQ86TL0 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1□□□□□ -2.25
ATG4DQ86TL0 SNORA40.16-201ENST00000517238 121 ntBASIC1□□□□□ -2.25
ATG4DQ86TL0 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1□□□□□ -2.25
ATG4DQ86TL0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
ATG4DQ86TL0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.99□□□□□ -2.25
ATG4DQ86TL0 AC243829.3-201ENST00000622177 108 ntBASIC0.99□□□□□ -2.25
ATG4DQ86TL0 MIR20A-201ENST00000362279 71 ntBASIC0.98□□□□□ -2.25
ATG4DQ86TL0 RNA5SP517-201ENST00000364724 117 ntBASIC0.98□□□□□ -2.25
ATG4DQ86TL0 RNU4-45P-201ENST00000365469 141 ntBASIC0.98□□□□□ -2.25
ATG4DQ86TL0 RNU6-35P-201ENST00000384530 107 ntBASIC0.98□□□□□ -2.25
ATG4DQ86TL0 RNU6-337P-201ENST00000391243 106 ntBASIC0.98□□□□□ -2.25
ATG4DQ86TL0 AC244090.1-201ENST00000441884 93 ntBASIC0.98□□□□□ -2.25
ATG4DQ86TL0 MIR7110-201ENST00000612638 86 ntBASIC0.98□□□□□ -2.25
ATG4DQ86TL0 SNORA36.2-201ENST00000384004 127 ntBASIC0.97□□□□□ -2.25
ATG4DQ86TL0 MIR4452-201ENST00000583004 71 ntBASIC0.97□□□□□ -2.25
ATG4DQ86TL0 SNORA25.18-201ENST00000607153 114 ntBASIC0.97□□□□□ -2.25
ATG4DQ86TL0 RNU6-810P-201ENST00000364001 107 ntBASIC0.96□□□□□ -2.26
ATG4DQ86TL0 RNU4-33P-201ENST00000364316 85 ntBASIC0.96□□□□□ -2.26
ATG4DQ86TL0 RNU1-93P-201ENST00000364704 169 ntBASIC0.96□□□□□ -2.26
ATG4DQ86TL0 Y_RNA.355-201ENST00000365462 98 ntBASIC0.95□□□□□ -2.26
ATG4DQ86TL0 RNU6-1232P-201ENST00000516299 86 ntBASIC0.95□□□□□ -2.26
ATG4DQ86TL0 MIR4295-201ENST00000585286 85 ntBASIC0.95□□□□□ -2.26
ATG4DQ86TL0 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
ATG4DQ86TL0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.94□□□□□ -2.26
ATG4DQ86TL0 SNORD1B-201ENST00000363091 84 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 Y_RNA.109-201ENST00000363215 102 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 MIR520E-201ENST00000384867 87 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 SNORA49-201ENST00000386157 136 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
ATG4DQ86TL0 AC087343.1-201ENST00000477341 475 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 ACA64.5-201ENST00000516207 127 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 RNU7-188P-201ENST00000517063 64 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 MIR5706-201ENST00000579841 80 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 AL353765.1-201ENST00000605514 183 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 MIR6773-201ENST00000612812 74 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 MIR7111-201ENST00000619751 72 ntBASIC0.94□□□□□ -2.26
ATG4DQ86TL0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.94□□□□□ -2.26
ATG4DQ86TL0 SNORD115-25-201ENST00000362619 82 ntBASIC0.93□□□□□ -2.26
ATG4DQ86TL0 RNU6-246P-201ENST00000384702 107 ntBASIC0.93□□□□□ -2.26
ATG4DQ86TL0 RNU6-172P-201ENST00000411000 93 ntBASIC0.93□□□□□ -2.26
ATG4DQ86TL0 RPS29P1-201ENST00000465274 159 ntBASIC0.93□□□□□ -2.26
ATG4DQ86TL0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
ATG4DQ86TL0 Y_RNA.118-201ENST00000363300 101 ntBASIC0.92□□□□□ -2.26
ATG4DQ86TL0 Y_RNA.423-201ENST00000384057 113 ntBASIC0.92□□□□□ -2.26
ATG4DQ86TL0 SNORA40B-201ENST00000385573 128 ntBASIC0.92□□□□□ -2.26
ATG4DQ86TL0 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.92□□□□□ -2.26
ATG4DQ86TL0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
ATG4DQ86TL0 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
ATG4DQ86TL0 SNORD114-29-201ENST00000364819 70 ntBASIC0.91□□□□□ -2.26
ATG4DQ86TL0 OR2A41P-201ENST00000473586 105 ntBASIC0.91□□□□□ -2.26
ATG4DQ86TL0 RNU6-229P-201ENST00000516614 102 ntBASIC0.91□□□□□ -2.26
ATG4DQ86TL0 RNU6-175P-201ENST00000516896 107 ntBASIC0.91□□□□□ -2.26
ATG4DQ86TL0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.9□□□□□ -2.26
ATG4DQ86TL0 RNU6-930P-201ENST00000390938 100 ntBASIC0.9□□□□□ -2.27
ATG4DQ86TL0 MIR548X-201ENST00000580069 75 ntBASIC0.9□□□□□ -2.27
ATG4DQ86TL0 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
ATG4DQ86TL0 SNORA2A-201ENST00000383885 135 ntBASIC0.89□□□□□ -2.27
ATG4DQ86TL0 RNU6-1036P-201ENST00000383959 104 ntBASIC0.89□□□□□ -2.27
ATG4DQ86TL0 MIR140-201ENST00000385282 100 ntBASIC0.89□□□□□ -2.27
ATG4DQ86TL0 RNU7-154P-201ENST00000516194 62 ntBASIC0.88□□□□□ -2.27
ATG4DQ86TL0 RNU4-54P-201ENST00000516428 129 ntBASIC0.88□□□□□ -2.27
ATG4DQ86TL0 RNU6-782P-201ENST00000516852 104 ntBASIC0.88□□□□□ -2.27
ATG4DQ86TL0 MIR4490-201ENST00000582647 84 ntBASIC0.88□□□□□ -2.27
ATG4DQ86TL0 MIR373-201ENST00000362273 69 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms