Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 AC021146.9-201ENST00000512503 156 ntBASIC0.84□□□□□ -2.27
LIMS2Q7Z4I7 SNORA63.6-201ENST00000364921 119 ntBASIC0.83□□□□□ -2.28
LIMS2Q7Z4I7 RNY1P8-201ENST00000383970 114 ntBASIC0.83□□□□□ -2.28
LIMS2Q7Z4I7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
LIMS2Q7Z4I7 RNA5SP222-201ENST00000411039 105 ntBASIC0.83□□□□□ -2.28
LIMS2Q7Z4I7 MIR5706-201ENST00000579841 80 ntBASIC0.83□□□□□ -2.28
LIMS2Q7Z4I7 MIR4661-201ENST00000582720 75 ntBASIC0.83□□□□□ -2.28
LIMS2Q7Z4I7 U2.7-201ENST00000619197 100 ntBASIC0.83□□□□□ -2.28
LIMS2Q7Z4I7 RNU6-940P-201ENST00000363433 104 ntBASIC0.82□□□□□ -2.28
LIMS2Q7Z4I7 RNA5SP517-201ENST00000364724 117 ntBASIC0.82□□□□□ -2.28
LIMS2Q7Z4I7 SNORA33.1-201ENST00000364957 130 ntBASIC0.82□□□□□ -2.28
LIMS2Q7Z4I7 HMGN2P22-201ENST00000427588 175 ntBASIC0.82□□□□□ -2.28
LIMS2Q7Z4I7 MIR4752-201ENST00000579672 72 ntBASIC0.82□□□□□ -2.28
LIMS2Q7Z4I7 MIR4473-201ENST00000583731 91 ntBASIC0.82□□□□□ -2.28
LIMS2Q7Z4I7 RNU6-302P-201ENST00000365249 107 ntBASIC0.81□□□□□ -2.28
LIMS2Q7Z4I7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.81□□□□□ -2.28
LIMS2Q7Z4I7 RNU7-174P-201ENST00000516248 59 ntBASIC0.81□□□□□ -2.28
LIMS2Q7Z4I7 RNU6-1223P-201ENST00000517124 104 ntBASIC0.81□□□□□ -2.28
LIMS2Q7Z4I7 MIR466-201ENST00000580653 84 ntBASIC0.81□□□□□ -2.28
LIMS2Q7Z4I7 Y_RNA.125-201ENST00000363371 111 ntBASIC0.8□□□□□ -2.28
LIMS2Q7Z4I7 RNU6-829P-201ENST00000363700 112 ntBASIC0.8□□□□□ -2.28
LIMS2Q7Z4I7 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
LIMS2Q7Z4I7 RNU6-122P-201ENST00000516818 107 ntBASIC0.8□□□□□ -2.28
LIMS2Q7Z4I7 RNU6-92P-201ENST00000605893 104 ntBASIC0.8□□□□□ -2.28
LIMS2Q7Z4I7 uc_338.10-201ENST00000621872 182 ntBASIC0.8□□□□□ -2.28
LIMS2Q7Z4I7 AC069271.1-201ENST00000445577 156 ntBASIC0.79□□□□□ -2.28
LIMS2Q7Z4I7 MIR151B-201ENST00000584249 96 ntBASIC0.79□□□□□ -2.28
LIMS2Q7Z4I7 MIR6515-201ENST00000619843 57 ntBASIC0.79□□□□□ -2.28
LIMS2Q7Z4I7 RNU6-698P-201ENST00000363523 107 ntBASIC0.78□□□□□ -2.28
LIMS2Q7Z4I7 SNORD118-201ENST00000363593 134 ntBASIC0.78□□□□□ -2.28
LIMS2Q7Z4I7 RNU6-34P-201ENST00000364874 107 ntBASIC0.78□□□□□ -2.28
LIMS2Q7Z4I7 MIR608-201ENST00000384820 100 ntBASIC0.78□□□□□ -2.28
LIMS2Q7Z4I7 MIR140-201ENST00000385282 100 ntBASIC0.78□□□□□ -2.28
LIMS2Q7Z4I7 MIR5000-201ENST00000577717 103 ntBASIC0.78□□□□□ -2.28
LIMS2Q7Z4I7 MIR548V-201ENST00000584165 80 ntBASIC0.78□□□□□ -2.28
LIMS2Q7Z4I7 RNU6-446P-201ENST00000362827 106 ntBASIC0.77□□□□□ -2.29
LIMS2Q7Z4I7 RNU6-1079P-201ENST00000362861 110 ntBASIC0.77□□□□□ -2.29
LIMS2Q7Z4I7 MIR517B-201ENST00000385102 67 ntBASIC0.77□□□□□ -2.29
LIMS2Q7Z4I7 SNORA75.1-201ENST00000391130 148 ntBASIC0.77□□□□□ -2.29
LIMS2Q7Z4I7 AC244090.1-201ENST00000441884 93 ntBASIC0.77□□□□□ -2.29
LIMS2Q7Z4I7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
LIMS2Q7Z4I7 SNORD60.1-201ENST00000362451 73 ntBASIC0.76□□□□□ -2.29
LIMS2Q7Z4I7 Y_RNA.236-201ENST00000364427 111 ntBASIC0.76□□□□□ -2.29
LIMS2Q7Z4I7 MIR630-201ENST00000384957 97 ntBASIC0.76□□□□□ -2.29
LIMS2Q7Z4I7 MIR516B1-201ENST00000385211 90 ntBASIC0.76□□□□□ -2.29
LIMS2Q7Z4I7 ACA64.5-201ENST00000516207 127 ntBASIC0.76□□□□□ -2.29
LIMS2Q7Z4I7 RNA5SP480-201ENST00000516840 109 ntBASIC0.76□□□□□ -2.29
LIMS2Q7Z4I7 AC022709.1-201ENST00000615967 87 ntBASIC0.76□□□□□ -2.29
LIMS2Q7Z4I7 U4.4-201ENST00000620626 117 ntBASIC0.76□□□□□ -2.29
LIMS2Q7Z4I7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
LIMS2Q7Z4I7 SNORA36.2-201ENST00000384004 127 ntBASIC0.75□□□□□ -2.29
LIMS2Q7Z4I7 MIR598-201ENST00000384868 97 ntBASIC0.75□□□□□ -2.29
LIMS2Q7Z4I7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
LIMS2Q7Z4I7 PSMC1P5-201ENST00000512850 177 ntBASIC0.75□□□□□ -2.29
LIMS2Q7Z4I7 MIR3938-201ENST00000582157 103 ntBASIC0.75□□□□□ -2.29
LIMS2Q7Z4I7 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
LIMS2Q7Z4I7 MIR20A-201ENST00000362279 71 ntBASIC0.74□□□□□ -2.29
LIMS2Q7Z4I7 SNORA40.8-201ENST00000411034 126 ntBASIC0.74□□□□□ -2.29
LIMS2Q7Z4I7 RNU6-848P-201ENST00000515948 107 ntBASIC0.74□□□□□ -2.29
LIMS2Q7Z4I7 RNU6-617P-201ENST00000516147 107 ntBASIC0.74□□□□□ -2.29
LIMS2Q7Z4I7 RNU6-473P-201ENST00000516164 107 ntBASIC0.74□□□□□ -2.29
LIMS2Q7Z4I7 RNU6-1049P-201ENST00000516414 107 ntBASIC0.74□□□□□ -2.29
LIMS2Q7Z4I7 SNORA25.18-201ENST00000607153 114 ntBASIC0.74□□□□□ -2.29
LIMS2Q7Z4I7 MIR6835-201ENST00000621552 64 ntBASIC0.74□□□□□ -2.29
LIMS2Q7Z4I7 SNORD114-26-201ENST00000363543 72 ntBASIC0.73□□□□□ -2.29
LIMS2Q7Z4I7 RNU6-614P-201ENST00000384369 107 ntBASIC0.73□□□□□ -2.29
LIMS2Q7Z4I7 MIR548C-201ENST00000384815 97 ntBASIC0.73□□□□□ -2.29
LIMS2Q7Z4I7 CYP3A54P-201ENST00000566950 75 ntBASIC0.73□□□□□ -2.29
LIMS2Q7Z4I7 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
LIMS2Q7Z4I7 U6.59-201ENST00000615686 107 ntBASIC0.73□□□□□ -2.29
LIMS2Q7Z4I7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.73□□□□□ -2.29
LIMS2Q7Z4I7 RNU6-110P-201ENST00000384508 104 ntBASIC0.72□□□□□ -2.29
LIMS2Q7Z4I7 SNORD113-2-201ENST00000391082 72 ntBASIC0.72□□□□□ -2.29
LIMS2Q7Z4I7 RNU6-1232P-201ENST00000516299 86 ntBASIC0.72□□□□□ -2.29
LIMS2Q7Z4I7 MIR4714-201ENST00000580728 77 ntBASIC0.72□□□□□ -2.29
LIMS2Q7Z4I7 AC090617.8-201ENST00000623339 167 ntBASIC0.72□□□□□ -2.29
LIMS2Q7Z4I7 SNORA2A-201ENST00000383885 135 ntBASIC0.71□□□□□ -2.3
LIMS2Q7Z4I7 MIR518A1-201ENST00000385068 85 ntBASIC0.71□□□□□ -2.3
LIMS2Q7Z4I7 U7.6-201ENST00000610841 64 ntBASIC0.71□□□□□ -2.3
LIMS2Q7Z4I7 AC243829.6-201ENST00000612652 106 ntBASIC0.71□□□□□ -2.3
LIMS2Q7Z4I7 AC243829.3-201ENST00000622177 108 ntBASIC0.71□□□□□ -2.3
LIMS2Q7Z4I7 MIR508-201ENST00000384857 115 ntBASIC0.7□□□□□ -2.3
LIMS2Q7Z4I7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.7□□□□□ -2.3
LIMS2Q7Z4I7 RNU6-141P-201ENST00000410499 105 ntBASIC0.7□□□□□ -2.3
LIMS2Q7Z4I7 MIR6755-201ENST00000619993 66 ntBASIC0.7□□□□□ -2.3
LIMS2Q7Z4I7 U6.96-201ENST00000636425 70 ntBASIC0.7□□□□□ -2.3
LIMS2Q7Z4I7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
LIMS2Q7Z4I7 Y_RNA.246-201ENST00000364495 108 ntBASIC0.69□□□□□ -2.3
LIMS2Q7Z4I7 SNORA49-201ENST00000386157 136 ntBASIC0.69□□□□□ -2.3
LIMS2Q7Z4I7 RNU6-337P-201ENST00000391243 106 ntBASIC0.69□□□□□ -2.3
LIMS2Q7Z4I7 AC098934.3-201ENST00000430450 190 ntBASIC0.69□□□□□ -2.3
LIMS2Q7Z4I7 RNU4-54P-201ENST00000516428 129 ntBASIC0.69□□□□□ -2.3
LIMS2Q7Z4I7 RNU6-229P-201ENST00000516614 102 ntBASIC0.69□□□□□ -2.3
LIMS2Q7Z4I7 RNU6-175P-201ENST00000516896 107 ntBASIC0.69□□□□□ -2.3
LIMS2Q7Z4I7 MIR4677-201ENST00000584153 80 ntBASIC0.69□□□□□ -2.3
LIMS2Q7Z4I7 SNORD114-29-201ENST00000364819 70 ntBASIC0.68□□□□□ -2.3
LIMS2Q7Z4I7 Y_RNA.325-201ENST00000365171 122 ntBASIC0.68□□□□□ -2.3
LIMS2Q7Z4I7 MIR501-201ENST00000390204 84 ntBASIC0.68□□□□□ -2.3
LIMS2Q7Z4I7 AL021921.1-201ENST00000442774 93 ntBASIC0.68□□□□□ -2.3
LIMS2Q7Z4I7 SNORD2-201ENST00000459163 69 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms