Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.44□□□□□ -2.18
PTCRAQ6ISU1 RNA5SP404-201ENST00000517118 132 ntBASIC1.44□□□□□ -2.18
PTCRAQ6ISU1 AC011195.1-201ENST00000578177 177 ntBASIC1.44□□□□□ -2.18
PTCRAQ6ISU1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
PTCRAQ6ISU1 Y_RNA.246-201ENST00000364495 108 ntBASIC1.43□□□□□ -2.18
PTCRAQ6ISU1 SNORA25.8-201ENST00000364831 128 ntBASIC1.43□□□□□ -2.18
PTCRAQ6ISU1 MIR548E-201ENST00000408287 88 ntBASIC1.43□□□□□ -2.18
PTCRAQ6ISU1 SNORD99-201ENST00000408612 74 ntBASIC1.43□□□□□ -2.18
PTCRAQ6ISU1 RNU7-119P-201ENST00000459279 63 ntBASIC1.42□□□□□ -2.18
PTCRAQ6ISU1 RNA5SP94-201ENST00000516917 108 ntBASIC1.42□□□□□ -2.18
PTCRAQ6ISU1 MIR548AE1-201ENST00000583292 70 ntBASIC1.42□□□□□ -2.18
PTCRAQ6ISU1 MIR4473-201ENST00000583731 91 ntBASIC1.42□□□□□ -2.18
PTCRAQ6ISU1 MIR582-201ENST00000365731 98 ntBASIC1.41□□□□□ -2.18
PTCRAQ6ISU1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.41□□□□□ -2.18
PTCRAQ6ISU1 CYP3A54P-201ENST00000566950 75 ntBASIC1.41□□□□□ -2.18
PTCRAQ6ISU1 MIR5706-201ENST00000579841 80 ntBASIC1.41□□□□□ -2.18
PTCRAQ6ISU1 AL021921.1-201ENST00000442774 93 ntBASIC1.4□□□□□ -2.19
PTCRAQ6ISU1 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.19
PTCRAQ6ISU1 MIR7107-201ENST00000611489 80 ntBASIC1.4□□□□□ -2.19
PTCRAQ6ISU1 U6.96-201ENST00000636425 70 ntBASIC1.4□□□□□ -2.19
PTCRAQ6ISU1 SNORD2-201ENST00000459163 69 ntBASIC1.39□□□□□ -2.19
PTCRAQ6ISU1 MIR3660-201ENST00000584845 100 ntBASIC1.39□□□□□ -2.19
PTCRAQ6ISU1 MIR6767-201ENST00000637302 66 ntBASIC1.39□□□□□ -2.19
PTCRAQ6ISU1 RNU6-997P-201ENST00000384725 107 ntBASIC1.38□□□□□ -2.19
PTCRAQ6ISU1 AC244090.1-201ENST00000441884 93 ntBASIC1.38□□□□□ -2.19
PTCRAQ6ISU1 RNA5SP436-201ENST00000516020 115 ntBASIC1.38□□□□□ -2.19
PTCRAQ6ISU1 MIR20A-201ENST00000362279 71 ntBASIC1.37□□□□□ -2.19
PTCRAQ6ISU1 MIR516B1-201ENST00000385211 90 ntBASIC1.37□□□□□ -2.19
PTCRAQ6ISU1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
PTCRAQ6ISU1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.36□□□□□ -2.19
PTCRAQ6ISU1 AC243829.6-201ENST00000612652 106 ntBASIC1.36□□□□□ -2.19
PTCRAQ6ISU1 RNU6-1312P-201ENST00000362425 108 ntBASIC1.35□□□□□ -2.19
PTCRAQ6ISU1 Y_RNA.74-201ENST00000362911 99 ntBASIC1.35□□□□□ -2.19
PTCRAQ6ISU1 Y_RNA.325-201ENST00000365171 122 ntBASIC1.35□□□□□ -2.19
PTCRAQ6ISU1 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.35□□□□□ -2.19
PTCRAQ6ISU1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.35□□□□□ -2.19
PTCRAQ6ISU1 Y_RNA.178-201ENST00000363832 102 ntBASIC1.34□□□□□ -2.19
PTCRAQ6ISU1 SNORA70.25-201ENST00000612741 95 ntBASIC1.34□□□□□ -2.19
PTCRAQ6ISU1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
PTCRAQ6ISU1 MIR26B-201ENST00000362251 77 ntBASIC1.33□□□□□ -2.2
PTCRAQ6ISU1 Y_RNA.30-201ENST00000362572 97 ntBASIC1.33□□□□□ -2.2
PTCRAQ6ISU1 SNORA41B-201ENST00000384785 128 ntBASIC1.33□□□□□ -2.2
PTCRAQ6ISU1 MIR320A-201ENST00000385302 82 ntBASIC1.33□□□□□ -2.2
PTCRAQ6ISU1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.33□□□□□ -2.2
PTCRAQ6ISU1 RN7SL793P-201ENST00000583259 296 ntBASIC1.33□□□□□ -2.2
PTCRAQ6ISU1 RNA5SP222-201ENST00000411039 105 ntBASIC1.32□□□□□ -2.2
PTCRAQ6ISU1 U7.6-201ENST00000610841 64 ntBASIC1.32□□□□□ -2.2
PTCRAQ6ISU1 HMGN2P22-201ENST00000427588 175 ntBASIC1.31□□□□□ -2.2
PTCRAQ6ISU1 SNORA9.1-201ENST00000362412 131 ntBASIC1.3□□□□□ -2.2
PTCRAQ6ISU1 AL353765.1-201ENST00000605514 183 ntBASIC1.3□□□□□ -2.2
PTCRAQ6ISU1 AC243829.3-201ENST00000622177 108 ntBASIC1.3□□□□□ -2.2
PTCRAQ6ISU1 Y_RNA.379-201ENST00000365653 102 ntBASIC1.29□□□□□ -2.2
PTCRAQ6ISU1 SNORD116-16-201ENST00000384533 92 ntBASIC1.29□□□□□ -2.2
PTCRAQ6ISU1 AC087343.1-201ENST00000477341 475 ntBASIC1.29□□□□□ -2.2
PTCRAQ6ISU1 RNU6-518P-201ENST00000516056 96 ntBASIC1.29□□□□□ -2.2
PTCRAQ6ISU1 RNU6-231P-201ENST00000517122 103 ntBASIC1.29□□□□□ -2.2
PTCRAQ6ISU1 MIR4295-201ENST00000585286 85 ntBASIC1.29□□□□□ -2.2
PTCRAQ6ISU1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.29□□□□□ -2.2
PTCRAQ6ISU1 SNORD114-29-201ENST00000364819 70 ntBASIC1.28□□□□□ -2.2
PTCRAQ6ISU1 MIR216A-201ENST00000385063 110 ntBASIC1.28□□□□□ -2.2
PTCRAQ6ISU1 RNA5SP61-201ENST00000516453 100 ntBASIC1.28□□□□□ -2.2
PTCRAQ6ISU1 MIR5000-201ENST00000577717 103 ntBASIC1.27□□□□□ -2.21
PTCRAQ6ISU1 MIR4752-201ENST00000579672 72 ntBASIC1.27□□□□□ -2.21
PTCRAQ6ISU1 MIR548AD-201ENST00000584780 82 ntBASIC1.27□□□□□ -2.21
PTCRAQ6ISU1 MIR1255B2-201ENST00000408618 67 ntBASIC1.26□□□□□ -2.21
PTCRAQ6ISU1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
PTCRAQ6ISU1 MIR4661-201ENST00000582720 75 ntBASIC1.25□□□□□ -2.21
PTCRAQ6ISU1 Y_RNA.282-201ENST00000364793 102 ntBASIC1.24□□□□□ -2.21
PTCRAQ6ISU1 MIR519A2-201ENST00000384990 87 ntBASIC1.24□□□□□ -2.21
PTCRAQ6ISU1 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
PTCRAQ6ISU1 MIR527-201ENST00000385244 85 ntBASIC1.24□□□□□ -2.21
PTCRAQ6ISU1 RNU6-1246P-201ENST00000391064 107 ntBASIC1.24□□□□□ -2.21
PTCRAQ6ISU1 RNA5SP470-201ENST00000516463 106 ntBASIC1.24□□□□□ -2.21
PTCRAQ6ISU1 RNU1-29P-201ENST00000606574 126 ntBASIC1.24□□□□□ -2.21
PTCRAQ6ISU1 AC090617.8-201ENST00000623339 167 ntBASIC1.24□□□□□ -2.21
PTCRAQ6ISU1 RNA5SP517-201ENST00000364724 117 ntBASIC1.23□□□□□ -2.21
PTCRAQ6ISU1 SNORA2A-201ENST00000383885 135 ntBASIC1.23□□□□□ -2.21
PTCRAQ6ISU1 RNU6-848P-201ENST00000515948 107 ntBASIC1.23□□□□□ -2.21
PTCRAQ6ISU1 RNU6-617P-201ENST00000516147 107 ntBASIC1.23□□□□□ -2.21
PTCRAQ6ISU1 RNU6-473P-201ENST00000516164 107 ntBASIC1.23□□□□□ -2.21
PTCRAQ6ISU1 RNU6-1049P-201ENST00000516414 107 ntBASIC1.23□□□□□ -2.21
PTCRAQ6ISU1 AC069271.1-201ENST00000445577 156 ntBASIC1.22□□□□□ -2.21
PTCRAQ6ISU1 MIR7110-201ENST00000612638 86 ntBASIC1.22□□□□□ -2.21
PTCRAQ6ISU1 MIR7974-201ENST00000615835 79 ntBASIC1.22□□□□□ -2.21
PTCRAQ6ISU1 MIR140-201ENST00000385282 100 ntBASIC1.21□□□□□ -2.22
PTCRAQ6ISU1 RNU4-88P-201ENST00000411220 86 ntBASIC1.21□□□□□ -2.22
PTCRAQ6ISU1 RNU7-154P-201ENST00000516194 62 ntBASIC1.21□□□□□ -2.22
PTCRAQ6ISU1 SNORD118-201ENST00000363593 134 ntBASIC1.2□□□□□ -2.22
PTCRAQ6ISU1 RNU6-753P-201ENST00000363926 107 ntBASIC1.2□□□□□ -2.22
PTCRAQ6ISU1 SNORA36.2-201ENST00000384004 127 ntBASIC1.2□□□□□ -2.22
PTCRAQ6ISU1 AC211469.2-201ENST00000605461 205 ntBASIC1.2□□□□□ -2.22
PTCRAQ6ISU1 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
PTCRAQ6ISU1 RNU6-229P-201ENST00000516614 102 ntBASIC1.19□□□□□ -2.22
PTCRAQ6ISU1 MIR429-201ENST00000362106 83 ntBASIC1.18□□□□□ -2.22
PTCRAQ6ISU1 RNU6-246P-201ENST00000384702 107 ntBASIC1.18□□□□□ -2.22
PTCRAQ6ISU1 RNU6-337P-201ENST00000391243 106 ntBASIC1.18□□□□□ -2.22
PTCRAQ6ISU1 SNORD116.2-201ENST00000391251 93 ntBASIC1.18□□□□□ -2.22
PTCRAQ6ISU1 SNORA40.8-201ENST00000411034 126 ntBASIC1.18□□□□□ -2.22
PTCRAQ6ISU1 RNU6-980P-201ENST00000516925 103 ntBASIC1.18□□□□□ -2.22
PTCRAQ6ISU1 AC068338.1-201ENST00000565567 176 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 254.6 ms