Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SNORA25.8-201ENST00000364831 128 ntBASIC1.21□□□□□ -2.22
RNF43Q68DV7 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
RNF43Q68DV7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.2□□□□□ -2.22
RNF43Q68DV7 MIR18A-201ENST00000362310 71 ntBASIC1.2□□□□□ -2.22
RNF43Q68DV7 RNU6-1184P-201ENST00000384588 108 ntBASIC1.2□□□□□ -2.22
RNF43Q68DV7 SNORD110-201ENST00000408189 75 ntBASIC1.2□□□□□ -2.22
RNF43Q68DV7 AC006210.1-201ENST00000424882 111 ntBASIC1.2□□□□□ -2.22
RNF43Q68DV7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.2□□□□□ -2.22
RNF43Q68DV7 AC025627.3-201ENST00000582078 182 ntBASIC1.2□□□□□ -2.22
RNF43Q68DV7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
RNF43Q68DV7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RNF43Q68DV7 MIR26B-201ENST00000362251 77 ntBASIC1.19□□□□□ -2.22
RNF43Q68DV7 MIR548E-201ENST00000408287 88 ntBASIC1.19□□□□□ -2.22
RNF43Q68DV7 RNA5SP268-201ENST00000516828 124 ntBASIC1.19□□□□□ -2.22
RNF43Q68DV7 AC011195.1-201ENST00000578177 177 ntBASIC1.19□□□□□ -2.22
RNF43Q68DV7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.18□□□□□ -2.22
RNF43Q68DV7 RNA5SP436-201ENST00000516020 115 ntBASIC1.18□□□□□ -2.22
RNF43Q68DV7 RN7SL793P-201ENST00000583259 296 ntBASIC1.18□□□□□ -2.22
RNF43Q68DV7 SNORD99-201ENST00000408612 74 ntBASIC1.17□□□□□ -2.22
RNF43Q68DV7 RNA5SP255-201ENST00000516370 107 ntBASIC1.17□□□□□ -2.22
RNF43Q68DV7 Y_RNA.246-201ENST00000364495 108 ntBASIC1.16□□□□□ -2.22
RNF43Q68DV7 MIR618-201ENST00000385287 98 ntBASIC1.16□□□□□ -2.22
RNF43Q68DV7 MIR7107-201ENST00000611489 80 ntBASIC1.16□□□□□ -2.22
RNF43Q68DV7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
RNF43Q68DV7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
RNF43Q68DV7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
RNF43Q68DV7 SNORD114-24-201ENST00000365029 72 ntBASIC1.15□□□□□ -2.23
RNF43Q68DV7 Y_RNA.325-201ENST00000365171 122 ntBASIC1.15□□□□□ -2.23
RNF43Q68DV7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
RNF43Q68DV7 SNORA41B-201ENST00000384785 128 ntBASIC1.15□□□□□ -2.23
RNF43Q68DV7 RNA5SP94-201ENST00000516917 108 ntBASIC1.15□□□□□ -2.23
RNF43Q68DV7 MIR5000-201ENST00000577717 103 ntBASIC1.15□□□□□ -2.23
RNF43Q68DV7 SNORA70.25-201ENST00000612741 95 ntBASIC1.15□□□□□ -2.23
RNF43Q68DV7 SNORA9.1-201ENST00000362412 131 ntBASIC1.14□□□□□ -2.23
RNF43Q68DV7 RNU6-939P-201ENST00000384634 107 ntBASIC1.14□□□□□ -2.23
RNF43Q68DV7 MIR216A-201ENST00000385063 110 ntBASIC1.14□□□□□ -2.23
RNF43Q68DV7 RNU6-1246P-201ENST00000391064 107 ntBASIC1.14□□□□□ -2.23
RNF43Q68DV7 CYP3A54P-201ENST00000566950 75 ntBASIC1.14□□□□□ -2.23
RNF43Q68DV7 MIR4752-201ENST00000579672 72 ntBASIC1.14□□□□□ -2.23
RNF43Q68DV7 MIR548AD-201ENST00000584780 82 ntBASIC1.14□□□□□ -2.23
RNF43Q68DV7 U6.96-201ENST00000636425 70 ntBASIC1.14□□□□□ -2.23
RNF43Q68DV7 RNU6-520P-201ENST00000384717 104 ntBASIC1.13□□□□□ -2.23
RNF43Q68DV7 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
RNF43Q68DV7 MIR516B1-201ENST00000385211 90 ntBASIC1.12□□□□□ -2.23
RNF43Q68DV7 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
RNF43Q68DV7 AC090617.8-201ENST00000623339 167 ntBASIC1.12□□□□□ -2.23
RNF43Q68DV7 AC211469.2-201ENST00000605461 205 ntBASIC1.11□□□□□ -2.23
RNF43Q68DV7 RNU1-124P-201ENST00000363861 145 ntBASIC1.1□□□□□ -2.23
RNF43Q68DV7 RNU4-45P-201ENST00000365469 141 ntBASIC1.1□□□□□ -2.23
RNF43Q68DV7 RNA5SP222-201ENST00000411039 105 ntBASIC1.1□□□□□ -2.23
RNF43Q68DV7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
RNF43Q68DV7 Y_RNA.30-201ENST00000362572 97 ntBASIC1.09□□□□□ -2.23
RNF43Q68DV7 HMGN2P22-201ENST00000427588 175 ntBASIC1.09□□□□□ -2.23
RNF43Q68DV7 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.09□□□□□ -2.23
RNF43Q68DV7 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.09□□□□□ -2.23
RNF43Q68DV7 RNU6-518P-201ENST00000516056 96 ntBASIC1.08□□□□□ -2.24
RNF43Q68DV7 AC243829.6-201ENST00000612652 106 ntBASIC1.08□□□□□ -2.24
RNF43Q68DV7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
RNF43Q68DV7 RNU4-88P-201ENST00000411220 86 ntBASIC1.07□□□□□ -2.24
RNF43Q68DV7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.07□□□□□ -2.24
RNF43Q68DV7 AL021921.1-201ENST00000442774 93 ntBASIC1.07□□□□□ -2.24
RNF43Q68DV7 MIR1255B2-201ENST00000408618 67 ntBASIC1.06□□□□□ -2.24
RNF43Q68DV7 RNU7-119P-201ENST00000459279 63 ntBASIC1.06□□□□□ -2.24
RNF43Q68DV7 RNU6-231P-201ENST00000517122 103 ntBASIC1.06□□□□□ -2.24
RNF43Q68DV7 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
RNF43Q68DV7 RNU1-29P-201ENST00000606574 126 ntBASIC1.06□□□□□ -2.24
RNF43Q68DV7 Y_RNA.74-201ENST00000362911 99 ntBASIC1.05□□□□□ -2.24
RNF43Q68DV7 RNY1P8-201ENST00000383970 114 ntBASIC1.05□□□□□ -2.24
RNF43Q68DV7 CYP3A137P-201ENST00000562436 69 ntBASIC1.05□□□□□ -2.24
RNF43Q68DV7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
RNF43Q68DV7 MIR373-201ENST00000362273 69 ntBASIC1.04□□□□□ -2.24
RNF43Q68DV7 MIR20A-201ENST00000362279 71 ntBASIC1.04□□□□□ -2.24
RNF43Q68DV7 RNU4-38P-201ENST00000364472 129 ntBASIC1.04□□□□□ -2.24
RNF43Q68DV7 Y_RNA.379-201ENST00000365653 102 ntBASIC1.04□□□□□ -2.24
RNF43Q68DV7 MIR519A2-201ENST00000384990 87 ntBASIC1.04□□□□□ -2.24
RNF43Q68DV7 AC244090.1-201ENST00000441884 93 ntBASIC1.04□□□□□ -2.24
RNF43Q68DV7 AC069271.1-201ENST00000445577 156 ntBASIC1.04□□□□□ -2.24
RNF43Q68DV7 RNA5SP517-201ENST00000364724 117 ntBASIC1.03□□□□□ -2.24
RNF43Q68DV7 SNORD116-16-201ENST00000384533 92 ntBASIC1.03□□□□□ -2.24
RNF43Q68DV7 MIR193B-201ENST00000384907 83 ntBASIC1.03□□□□□ -2.24
RNF43Q68DV7 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
RNF43Q68DV7 AL353765.1-201ENST00000605514 183 ntBASIC1.03□□□□□ -2.24
RNF43Q68DV7 AC243829.3-201ENST00000622177 108 ntBASIC1.03□□□□□ -2.24
RNF43Q68DV7 RNU6-753P-201ENST00000363926 107 ntBASIC1.02□□□□□ -2.25
RNF43Q68DV7 Y_RNA.282-201ENST00000364793 102 ntBASIC1.02□□□□□ -2.25
RNF43Q68DV7 MIR532-201ENST00000385025 91 ntBASIC1.02□□□□□ -2.25
RNF43Q68DV7 MIR527-201ENST00000385244 85 ntBASIC1.02□□□□□ -2.25
RNF43Q68DV7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
RNF43Q68DV7 SNORD116.2-201ENST00000391251 93 ntBASIC1.02□□□□□ -2.25
RNF43Q68DV7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
RNF43Q68DV7 MIR6857-201ENST00000613267 93 ntBASIC1.02□□□□□ -2.25
RNF43Q68DV7 SNORA36.2-201ENST00000384004 127 ntBASIC1.01□□□□□ -2.25
RNF43Q68DV7 MIR5706-201ENST00000579841 80 ntBASIC1.01□□□□□ -2.25
RNF43Q68DV7 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1□□□□□ -2.25
RNF43Q68DV7 MIR548AG1-201ENST00000579932 66 ntBASIC1□□□□□ -2.25
RNF43Q68DV7 SNORA25.18-201ENST00000607153 114 ntBASIC1□□□□□ -2.25
RNF43Q68DV7 Y_RNA.178-201ENST00000363832 102 ntBASIC0.99□□□□□ -2.25
RNF43Q68DV7 RNU6-337P-201ENST00000391243 106 ntBASIC0.99□□□□□ -2.25
RNF43Q68DV7 RNU6-980P-201ENST00000516925 103 ntBASIC0.99□□□□□ -2.25
RNF43Q68DV7 MIR1273G-201ENST00000577677 100 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms