Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC244250.2-201ENST00000418731 148 ntBASIC-0.27□□□□□ -2.45
PDLIM3Q53GG5 AC097510.1-201ENST00000510945 133 ntBASIC-0.27□□□□□ -2.45
PDLIM3Q53GG5 RNU6-919P-201ENST00000516731 104 ntBASIC-0.27□□□□□ -2.45
PDLIM3Q53GG5 MIR3681-201ENST00000580089 72 ntBASIC-0.27□□□□□ -2.45
PDLIM3Q53GG5 SNORA18.1-201ENST00000363418 128 ntBASIC-0.28□□□□□ -2.45
PDLIM3Q53GG5 RNA5SP275-201ENST00000363936 118 ntBASIC-0.28□□□□□ -2.45
PDLIM3Q53GG5 RNU6-215P-201ENST00000365169 102 ntBASIC-0.28□□□□□ -2.45
PDLIM3Q53GG5 SNORA32.3-201ENST00000384772 121 ntBASIC-0.28□□□□□ -2.45
PDLIM3Q53GG5 AL035461.1-201ENST00000421490 332 ntBASIC-0.28□□□□□ -2.45
PDLIM3Q53GG5 SNORA40.13-201ENST00000516379 120 ntBASIC-0.28□□□□□ -2.45
PDLIM3Q53GG5 MIR4796-201ENST00000580742 81 ntBASIC-0.28□□□□□ -2.45
PDLIM3Q53GG5 RNU5F-1-201ENST00000362507 117 ntBASIC-0.29□□□□□ -2.46
PDLIM3Q53GG5 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.29□□□□□ -2.46
PDLIM3Q53GG5 RNU6-455P-201ENST00000384681 107 ntBASIC-0.29□□□□□ -2.46
PDLIM3Q53GG5 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.29□□□□□ -2.46
PDLIM3Q53GG5 MIR1236-201ENST00000408340 102 ntBASIC-0.29□□□□□ -2.46
PDLIM3Q53GG5 SNORD75.1-201ENST00000408373 60 ntBASIC-0.29□□□□□ -2.46
PDLIM3Q53GG5 RNU6-320P-201ENST00000516511 106 ntBASIC-0.29□□□□□ -2.46
PDLIM3Q53GG5 AP001318.4-201ENST00000616637 121 ntBASIC-0.29□□□□□ -2.46
PDLIM3Q53GG5 MIR2052-201ENST00000636055 55 ntBASIC-0.29□□□□□ -2.46
PDLIM3Q53GG5 MIR4773-1-201ENST00000637203 78 ntBASIC-0.29□□□□□ -2.46
PDLIM3Q53GG5 SNORD115-27-201ENST00000364430 82 ntBASIC-0.3□□□□□ -2.46
PDLIM3Q53GG5 RNU6-147P-201ENST00000383983 107 ntBASIC-0.3□□□□□ -2.46
PDLIM3Q53GG5 AC096531.1-201ENST00000419107 107 ntBASIC-0.3□□□□□ -2.46
PDLIM3Q53GG5 snoU13.17-201ENST00000458802 104 ntBASIC-0.3□□□□□ -2.46
PDLIM3Q53GG5 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.3□□□□□ -2.46
PDLIM3Q53GG5 RNU6-495P-201ENST00000362995 107 ntBASIC-0.31□□□□□ -2.46
PDLIM3Q53GG5 RNU6-990P-201ENST00000364385 104 ntBASIC-0.31□□□□□ -2.46
PDLIM3Q53GG5 SNORA24B-201ENST00000384176 131 ntBASIC-0.31□□□□□ -2.46
PDLIM3Q53GG5 MIR548E-201ENST00000408287 88 ntBASIC-0.31□□□□□ -2.46
PDLIM3Q53GG5 MIR548AZ-201ENST00000616567 95 ntBASIC-0.31□□□□□ -2.46
PDLIM3Q53GG5 RNU6-382P-201ENST00000365181 106 ntBASIC-0.32□□□□□ -2.46
PDLIM3Q53GG5 RNU6-32P-201ENST00000383948 107 ntBASIC-0.32□□□□□ -2.46
PDLIM3Q53GG5 RNU6-13P-201ENST00000384248 107 ntBASIC-0.32□□□□□ -2.46
PDLIM3Q53GG5 RNU6-12P-201ENST00000384604 107 ntBASIC-0.32□□□□□ -2.46
PDLIM3Q53GG5 RNU6-41P-201ENST00000384741 107 ntBASIC-0.32□□□□□ -2.46
PDLIM3Q53GG5 snoU13.13-201ENST00000458842 104 ntBASIC-0.32□□□□□ -2.46
PDLIM3Q53GG5 MALAT1.1-201ENST00000618249 95 ntBASIC-0.32□□□□□ -2.46
PDLIM3Q53GG5 RNU6-755P-201ENST00000364400 103 ntBASIC-0.33□□□□□ -2.46
PDLIM3Q53GG5 MIR203A-201ENST00000384836 110 ntBASIC-0.33□□□□□ -2.46
PDLIM3Q53GG5 SNORA49-201ENST00000386157 136 ntBASIC-0.33□□□□□ -2.46
PDLIM3Q53GG5 AL445193.1-201ENST00000441183 141 ntBASIC-0.33□□□□□ -2.46
PDLIM3Q53GG5 MIR378F-201ENST00000578143 78 ntBASIC-0.33□□□□□ -2.46
PDLIM3Q53GG5 uc_338.36-201ENST00000622331 158 ntBASIC-0.33□□□□□ -2.46
PDLIM3Q53GG5 SNORD115-25-201ENST00000362619 82 ntBASIC-0.34□□□□□ -2.46
PDLIM3Q53GG5 RNU6-158P-201ENST00000517104 100 ntBASIC-0.34□□□□□ -2.46
PDLIM3Q53GG5 MIR4263-201ENST00000584745 83 ntBASIC-0.34□□□□□ -2.46
PDLIM3Q53GG5 MIR4788-201ENST00000639104 80 ntBASIC-0.34□□□□□ -2.46
PDLIM3Q53GG5 MIR655-201ENST00000362159 97 ntBASIC-0.35□□□□□ -2.47
PDLIM3Q53GG5 RNU6-824P-201ENST00000363724 104 ntBASIC-0.35□□□□□ -2.47
PDLIM3Q53GG5 RNU6-901P-201ENST00000384593 106 ntBASIC-0.35□□□□□ -2.47
PDLIM3Q53GG5 MIR519C-201ENST00000385053 87 ntBASIC-0.35□□□□□ -2.47
PDLIM3Q53GG5 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
PDLIM3Q53GG5 RNA5SP300-201ENST00000391197 107 ntBASIC-0.35□□□□□ -2.47
PDLIM3Q53GG5 SNORD75.2-201ENST00000408784 58 ntBASIC-0.35□□□□□ -2.47
PDLIM3Q53GG5 RNA5SP147-201ENST00000516493 109 ntBASIC-0.35□□□□□ -2.47
PDLIM3Q53GG5 MIR4668-201ENST00000582284 70 ntBASIC-0.35□□□□□ -2.47
PDLIM3Q53GG5 AC006254.2-201ENST00000603259 279 ntBASIC-0.35□□□□□ -2.47
PDLIM3Q53GG5 MIR3666-201ENST00000607845 111 ntBASIC-0.35□□□□□ -2.47
PDLIM3Q53GG5 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.36□□□□□ -2.47
PDLIM3Q53GG5 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.36□□□□□ -2.47
PDLIM3Q53GG5 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.36□□□□□ -2.47
PDLIM3Q53GG5 MIR488-201ENST00000365739 83 ntBASIC-0.37□□□□□ -2.47
PDLIM3Q53GG5 RNY1P7-201ENST00000384743 110 ntBASIC-0.37□□□□□ -2.47
PDLIM3Q53GG5 AL450471.1-201ENST00000447509 127 ntBASIC-0.37□□□□□ -2.47
PDLIM3Q53GG5 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.37□□□□□ -2.47
PDLIM3Q53GG5 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.38□□□□□ -2.47
PDLIM3Q53GG5 SNORD115-37-201ENST00000363768 82 ntBASIC-0.38□□□□□ -2.47
PDLIM3Q53GG5 RNU6-10P-201ENST00000384036 107 ntBASIC-0.38□□□□□ -2.47
PDLIM3Q53GG5 RNU6-402P-201ENST00000410678 103 ntBASIC-0.38□□□□□ -2.47
PDLIM3Q53GG5 AC021146.9-201ENST00000512503 156 ntBASIC-0.38□□□□□ -2.47
PDLIM3Q53GG5 RNU6-267P-201ENST00000516714 103 ntBASIC-0.38□□□□□ -2.47
PDLIM3Q53GG5 MIR365A-201ENST00000362260 87 ntBASIC-0.39□□□□□ -2.47
PDLIM3Q53GG5 SNORA63.6-201ENST00000364921 119 ntBASIC-0.39□□□□□ -2.47
PDLIM3Q53GG5 SNORD116-22-201ENST00000384430 92 ntBASIC-0.39□□□□□ -2.47
PDLIM3Q53GG5 MIR9-2-201ENST00000384838 87 ntBASIC-0.39□□□□□ -2.47
PDLIM3Q53GG5 AL691482.2-201ENST00000457453 84 ntBASIC-0.39□□□□□ -2.47
PDLIM3Q53GG5 SNORD2-201ENST00000459163 69 ntBASIC-0.39□□□□□ -2.47
PDLIM3Q53GG5 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.39□□□□□ -2.47
PDLIM3Q53GG5 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.39□□□□□ -2.47
PDLIM3Q53GG5 MIR6509-201ENST00000614603 85 ntBASIC-0.39□□□□□ -2.47
PDLIM3Q53GG5 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.4□□□□□ -2.47
PDLIM3Q53GG5 RNU6-640P-201ENST00000363693 105 ntBASIC-0.4□□□□□ -2.47
PDLIM3Q53GG5 SNORD114-11-201ENST00000363738 75 ntBASIC-0.4□□□□□ -2.47
PDLIM3Q53GG5 RNU6-905P-201ENST00000384434 107 ntBASIC-0.4□□□□□ -2.47
PDLIM3Q53GG5 MIR196A2-201ENST00000385189 110 ntBASIC-0.4□□□□□ -2.47
PDLIM3Q53GG5 SNORD126-201ENST00000459475 77 ntBASIC-0.4□□□□□ -2.47
PDLIM3Q53GG5 RNU6-274P-201ENST00000459566 107 ntBASIC-0.4□□□□□ -2.47
PDLIM3Q53GG5 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.4□□□□□ -2.47
PDLIM3Q53GG5 AC145423.2-201ENST00000610631 239 ntBASIC-0.4□□□□□ -2.47
PDLIM3Q53GG5 AL590491.3-201ENST00000610731 82 ntBASIC-0.4□□□□□ -2.47
PDLIM3Q53GG5 SNORD14C-201ENST00000365382 88 ntBASIC-0.41□□□□□ -2.48
PDLIM3Q53GG5 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.41□□□□□ -2.48
PDLIM3Q53GG5 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
PDLIM3Q53GG5 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.41□□□□□ -2.48
PDLIM3Q53GG5 RNU6-208P-201ENST00000362431 107 ntBASIC-0.42□□□□□ -2.48
PDLIM3Q53GG5 RNU6-633P-201ENST00000362612 103 ntBASIC-0.42□□□□□ -2.48
PDLIM3Q53GG5 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.42□□□□□ -2.48
PDLIM3Q53GG5 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.42□□□□□ -2.48
PDLIM3Q53GG5 RNU7-24P-201ENST00000458867 62 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms