Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 SCARNA17.3-201ENST00000516381 125 ntBASIC0.34□□□□□ -2.36
PHC1P78364 MIR664A-201ENST00000626086 82 ntBASIC0.34□□□□□ -2.36
PHC1P78364 RNU6-127P-201ENST00000390897 107 ntBASIC0.33□□□□□ -2.36
PHC1P78364 AC074348.1-201ENST00000426503 132 ntBASIC0.33□□□□□ -2.36
PHC1P78364 SCARNA18B-201ENST00000458806 135 ntBASIC0.33□□□□□ -2.36
PHC1P78364 AC108740.1-201ENST00000498629 225 ntBASIC0.33□□□□□ -2.36
PHC1P78364 RNU6-857P-201ENST00000515893 110 ntBASIC0.33□□□□□ -2.36
PHC1P78364 RNA5SP395-201ENST00000516567 118 ntBASIC0.33□□□□□ -2.36
PHC1P78364 RNU6-807P-201ENST00000516805 107 ntBASIC0.33□□□□□ -2.36
PHC1P78364 AC084368.1-201ENST00000620935 65 ntBASIC0.33□□□□□ -2.36
PHC1P78364 Y_RNA.30-201ENST00000362572 97 ntBASIC0.32□□□□□ -2.36
PHC1P78364 MIR582-201ENST00000365731 98 ntBASIC0.32□□□□□ -2.36
PHC1P78364 RNU6-1039P-201ENST00000383931 107 ntBASIC0.32□□□□□ -2.36
PHC1P78364 RNU6-1275P-201ENST00000391087 107 ntBASIC0.32□□□□□ -2.36
PHC1P78364 AL691482.2-201ENST00000457453 84 ntBASIC0.32□□□□□ -2.36
PHC1P78364 RNU6-752P-201ENST00000516376 102 ntBASIC0.32□□□□□ -2.36
PHC1P78364 RNA5SP330-201ENST00000517096 96 ntBASIC0.32□□□□□ -2.36
PHC1P78364 MIR3925-201ENST00000584674 77 ntBASIC0.32□□□□□ -2.36
PHC1P78364 MIR1297-201ENST00000637311 77 ntBASIC0.32□□□□□ -2.36
PHC1P78364 Y_RNA.374-201ENST00000365606 101 ntBASIC0.31□□□□□ -2.36
PHC1P78364 SNORA8.1-201ENST00000384250 140 ntBASIC0.31□□□□□ -2.36
PHC1P78364 RNU7-188P-201ENST00000517063 64 ntBASIC0.31□□□□□ -2.36
PHC1P78364 MIR6509-201ENST00000614603 85 ntBASIC0.31□□□□□ -2.36
PHC1P78364 MIR4315-1-201ENST00000636800 73 ntBASIC0.31□□□□□ -2.36
PHC1P78364 MIR4315-2-201ENST00000640925 73 ntBASIC0.31□□□□□ -2.36
PHC1P78364 MIR330-201ENST00000362196 94 ntBASIC0.3□□□□□ -2.36
PHC1P78364 MIR643-201ENST00000385267 97 ntBASIC0.3□□□□□ -2.36
PHC1P78364 MIR889-201ENST00000401280 79 ntBASIC0.3□□□□□ -2.36
PHC1P78364 Y_RNA.685-201ENST00000516532 108 ntBASIC0.3□□□□□ -2.36
PHC1P78364 SNORA62.5-201ENST00000516634 120 ntBASIC0.3□□□□□ -2.36
PHC1P78364 RNA5SP457-201ENST00000363657 124 ntBASIC0.29□□□□□ -2.36
PHC1P78364 snoU13.13-201ENST00000458842 104 ntBASIC0.29□□□□□ -2.36
PHC1P78364 MIR4514-201ENST00000581410 57 ntBASIC0.29□□□□□ -2.36
PHC1P78364 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.29□□□□□ -2.36
PHC1P78364 SNORD114-29-201ENST00000364819 70 ntBASIC0.28□□□□□ -2.36
PHC1P78364 MIR548E-201ENST00000408287 88 ntBASIC0.28□□□□□ -2.36
PHC1P78364 MIR106A-201ENST00000384870 81 ntBASIC0.27□□□□□ -2.37
PHC1P78364 MIR876-201ENST00000401147 81 ntBASIC0.27□□□□□ -2.37
PHC1P78364 MIR1197-201ENST00000408818 88 ntBASIC0.27□□□□□ -2.37
PHC1P78364 RNA5SP147-201ENST00000516493 109 ntBASIC0.27□□□□□ -2.37
PHC1P78364 RNU6-782P-201ENST00000516852 104 ntBASIC0.27□□□□□ -2.37
PHC1P78364 MIR3657-201ENST00000584818 117 ntBASIC0.27□□□□□ -2.37
PHC1P78364 RN7SL660P-201ENST00000614852 299 ntBASIC0.27□□□□□ -2.37
PHC1P78364 RNU6-24P-201ENST00000384440 107 ntBASIC0.26□□□□□ -2.37
PHC1P78364 SNORA75.1-201ENST00000391130 148 ntBASIC0.26□□□□□ -2.37
PHC1P78364 RNU6-175P-201ENST00000516896 107 ntBASIC0.26□□□□□ -2.37
PHC1P78364 SCARNA11.2-201ENST00000517183 154 ntBASIC0.26□□□□□ -2.37
PHC1P78364 MIR3134-201ENST00000579433 74 ntBASIC0.26□□□□□ -2.37
PHC1P78364 AL109933.3-201ENST00000619095 188 ntBASIC0.26□□□□□ -2.37
PHC1P78364 MIR20A-201ENST00000362279 71 ntBASIC0.25□□□□□ -2.37
PHC1P78364 RNU6-260P-201ENST00000384092 107 ntBASIC0.25□□□□□ -2.37
PHC1P78364 MIR610-201ENST00000385139 96 ntBASIC0.25□□□□□ -2.37
PHC1P78364 MIR548H2-201ENST00000408874 88 ntBASIC0.25□□□□□ -2.37
PHC1P78364 AC244090.1-201ENST00000441884 93 ntBASIC0.25□□□□□ -2.37
PHC1P78364 SNORA2.1-201ENST00000363089 137 ntBASIC0.24□□□□□ -2.37
PHC1P78364 SNORA63.6-201ENST00000364921 119 ntBASIC0.24□□□□□ -2.37
PHC1P78364 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
PHC1P78364 MIR3675-201ENST00000583661 73 ntBASIC0.24□□□□□ -2.37
PHC1P78364 Y_RNA.244-201ENST00000364484 109 ntBASIC0.23□□□□□ -2.37
PHC1P78364 SNORA49-201ENST00000386157 136 ntBASIC0.23□□□□□ -2.37
PHC1P78364 AC021146.9-201ENST00000512503 156 ntBASIC0.23□□□□□ -2.37
PHC1P78364 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
PHC1P78364 SNORA42.1-201ENST00000363515 137 ntBASIC0.21□□□□□ -2.38
PHC1P78364 MIR892B-201ENST00000401279 77 ntBASIC0.21□□□□□ -2.38
PHC1P78364 AC023932.2-201ENST00000603176 175 ntBASIC0.21□□□□□ -2.38
PHC1P78364 AC104408.1-201ENST00000605241 170 ntBASIC0.21□□□□□ -2.38
PHC1P78364 AC145423.2-201ENST00000610631 239 ntBASIC0.21□□□□□ -2.38
PHC1P78364 AC090617.8-201ENST00000623339 167 ntBASIC0.21□□□□□ -2.38
PHC1P78364 RNA5SP257-201ENST00000363023 116 ntBASIC0.2□□□□□ -2.38
PHC1P78364 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
PHC1P78364 MIR1295A-201ENST00000408463 79 ntBASIC0.2□□□□□ -2.38
PHC1P78364 RNU6-523P-201ENST00000516304 54 ntBASIC0.2□□□□□ -2.38
PHC1P78364 U7.4-201ENST00000614961 63 ntBASIC0.2□□□□□ -2.38
PHC1P78364 RNU6-1036P-201ENST00000383959 104 ntBASIC0.19□□□□□ -2.38
PHC1P78364 RNU6-604P-201ENST00000390917 100 ntBASIC0.19□□□□□ -2.38
PHC1P78364 RNU6-982P-201ENST00000516216 102 ntBASIC0.19□□□□□ -2.38
PHC1P78364 RNU6-70P-201ENST00000516438 60 ntBASIC0.19□□□□□ -2.38
PHC1P78364 Y_RNA.681-201ENST00000516445 113 ntBASIC0.19□□□□□ -2.38
PHC1P78364 SNORD45.1-201ENST00000363181 77 ntBASIC0.18□□□□□ -2.38
PHC1P78364 RNA5SP214-201ENST00000363378 118 ntBASIC0.18□□□□□ -2.38
PHC1P78364 MIR593-201ENST00000384856 100 ntBASIC0.18□□□□□ -2.38
PHC1P78364 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
PHC1P78364 RNA5SP63-201ENST00000391225 112 ntBASIC0.18□□□□□ -2.38
PHC1P78364 MIR6514-201ENST00000622549 70 ntBASIC0.18□□□□□ -2.38
PHC1P78364 SNORD115-31-201ENST00000365318 82 ntBASIC0.17□□□□□ -2.38
PHC1P78364 SNORD45A-201ENST00000384512 84 ntBASIC0.17□□□□□ -2.38
PHC1P78364 RNA5SP163-201ENST00000410304 99 ntBASIC0.17□□□□□ -2.38
PHC1P78364 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.17□□□□□ -2.38
PHC1P78364 SNORD115-22-201ENST00000364456 82 ntBASIC0.16□□□□□ -2.38
PHC1P78364 Y_RNA.250-201ENST00000364542 110 ntBASIC0.16□□□□□ -2.38
PHC1P78364 Y_RNA.633-201ENST00000459107 95 ntBASIC0.16□□□□□ -2.38
PHC1P78364 RNU6-638P-201ENST00000516582 104 ntBASIC0.16□□□□□ -2.38
PHC1P78364 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.16□□□□□ -2.38
PHC1P78364 Y_RNA.68-201ENST00000362881 102 ntBASIC0.15□□□□□ -2.39
PHC1P78364 SNORD114-5-201ENST00000362928 70 ntBASIC0.15□□□□□ -2.39
PHC1P78364 SNORA33.1-201ENST00000364957 130 ntBASIC0.15□□□□□ -2.39
PHC1P78364 RNU6-1241P-201ENST00000384536 107 ntBASIC0.15□□□□□ -2.39
PHC1P78364 SNORD2-201ENST00000459163 69 ntBASIC0.15□□□□□ -2.39
PHC1P78364 RNU6-687P-201ENST00000516443 89 ntBASIC0.15□□□□□ -2.39
PHC1P78364 RNU6-881P-201ENST00000516813 102 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 198.2 ms