Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.9□□□□□ -2.27
YBX1P67809 MIR548C-201ENST00000384815 97 ntBASIC0.9□□□□□ -2.27
YBX1P67809 AC021146.9-201ENST00000512503 156 ntBASIC0.9□□□□□ -2.27
YBX1P67809 SCARNA17.3-201ENST00000516381 125 ntBASIC0.9□□□□□ -2.27
YBX1P67809 MIR4698-201ENST00000577795 80 ntBASIC0.9□□□□□ -2.27
YBX1P67809 MIR548AE1-201ENST00000583292 70 ntBASIC0.9□□□□□ -2.27
YBX1P67809 SNORA70.25-201ENST00000612741 95 ntBASIC0.9□□□□□ -2.27
YBX1P67809 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
YBX1P67809 Y_RNA.375-201ENST00000365625 101 ntBASIC0.89□□□□□ -2.27
YBX1P67809 RNA5SP517-201ENST00000364724 117 ntBASIC0.88□□□□□ -2.27
YBX1P67809 RNU6-1089P-201ENST00000516473 104 ntBASIC0.88□□□□□ -2.27
YBX1P67809 MIR521-2-201ENST00000384818 87 ntBASIC0.87□□□□□ -2.27
YBX1P67809 MIR608-201ENST00000384820 100 ntBASIC0.87□□□□□ -2.27
YBX1P67809 MIR140-201ENST00000385282 100 ntBASIC0.87□□□□□ -2.27
YBX1P67809 AC110620.1-201ENST00000416042 228 ntBASIC0.87□□□□□ -2.27
YBX1P67809 AC092634.7-201ENST00000621022 103 ntBASIC0.87□□□□□ -2.27
YBX1P67809 uc_338.10-201ENST00000621872 182 ntBASIC0.87□□□□□ -2.27
YBX1P67809 AC010487.4-201ENST00000637027 61 ntBASIC0.87□□□□□ -2.27
YBX1P67809 RNU6-110P-201ENST00000384508 104 ntBASIC0.86□□□□□ -2.27
YBX1P67809 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
YBX1P67809 RNA5SP299-201ENST00000391203 116 ntBASIC0.86□□□□□ -2.27
YBX1P67809 AC069271.1-201ENST00000445577 156 ntBASIC0.86□□□□□ -2.27
YBX1P67809 AL157398.1-201ENST00000452981 186 ntBASIC0.86□□□□□ -2.27
YBX1P67809 SNORA25.18-201ENST00000607153 114 ntBASIC0.86□□□□□ -2.27
YBX1P67809 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
YBX1P67809 RNA5SP257-201ENST00000363023 116 ntBASIC0.85□□□□□ -2.27
YBX1P67809 RNA5SP215-201ENST00000363440 122 ntBASIC0.85□□□□□ -2.27
YBX1P67809 SNORD114-23-201ENST00000363536 72 ntBASIC0.85□□□□□ -2.27
YBX1P67809 SNORA15B-2-201ENST00000384058 135 ntBASIC0.85□□□□□ -2.27
YBX1P67809 SNORA15B-1-201ENST00000384334 135 ntBASIC0.85□□□□□ -2.27
YBX1P67809 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
YBX1P67809 RNA5SP121-201ENST00000516537 101 ntBASIC0.85□□□□□ -2.27
YBX1P67809 MIR548V-201ENST00000584165 80 ntBASIC0.85□□□□□ -2.27
YBX1P67809 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.85□□□□□ -2.27
YBX1P67809 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
YBX1P67809 SNORA63.6-201ENST00000364921 119 ntBASIC0.84□□□□□ -2.27
YBX1P67809 MIR582-201ENST00000365731 98 ntBASIC0.84□□□□□ -2.27
YBX1P67809 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.84□□□□□ -2.27
YBX1P67809 ACA64.5-201ENST00000516207 127 ntBASIC0.84□□□□□ -2.27
YBX1P67809 RNA5SP330-201ENST00000517096 96 ntBASIC0.84□□□□□ -2.27
YBX1P67809 MIR6513-201ENST00000621188 64 ntBASIC0.84□□□□□ -2.27
YBX1P67809 RNU6-499P-201ENST00000365615 107 ntBASIC0.83□□□□□ -2.28
YBX1P67809 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
YBX1P67809 SNORA33.1-201ENST00000364957 130 ntBASIC0.82□□□□□ -2.28
YBX1P67809 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
YBX1P67809 MIR548E-201ENST00000408287 88 ntBASIC0.82□□□□□ -2.28
YBX1P67809 HMGN2P22-201ENST00000427588 175 ntBASIC0.82□□□□□ -2.28
YBX1P67809 Y_RNA.633-201ENST00000459107 95 ntBASIC0.82□□□□□ -2.28
YBX1P67809 SCARNA21.1-201ENST00000515996 128 ntBASIC0.82□□□□□ -2.28
YBX1P67809 MIR5706-201ENST00000579841 80 ntBASIC0.82□□□□□ -2.28
YBX1P67809 RNU6-302P-201ENST00000365249 107 ntBASIC0.81□□□□□ -2.28
YBX1P67809 SNORA40.8-201ENST00000411034 126 ntBASIC0.81□□□□□ -2.28
YBX1P67809 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
YBX1P67809 SNORD118-201ENST00000363593 134 ntBASIC0.8□□□□□ -2.28
YBX1P67809 SNORA25.5-201ENST00000363782 126 ntBASIC0.8□□□□□ -2.28
YBX1P67809 RNU6-669P-201ENST00000365575 107 ntBASIC0.8□□□□□ -2.28
YBX1P67809 MTND4LP19-201ENST00000403051 166 ntBASIC0.8□□□□□ -2.28
YBX1P67809 SNORD71-201ENST00000411292 86 ntBASIC0.8□□□□□ -2.28
YBX1P67809 RNU1-29P-201ENST00000606574 126 ntBASIC0.8□□□□□ -2.28
YBX1P67809 Y_RNA.125-201ENST00000363371 111 ntBASIC0.79□□□□□ -2.28
YBX1P67809 RNA5SP62-201ENST00000363457 110 ntBASIC0.79□□□□□ -2.28
YBX1P67809 RNA5SP192-201ENST00000364404 120 ntBASIC0.79□□□□□ -2.28
YBX1P67809 SNORA2A-201ENST00000383885 135 ntBASIC0.79□□□□□ -2.28
YBX1P67809 Y_RNA.423-201ENST00000384057 113 ntBASIC0.79□□□□□ -2.28
YBX1P67809 RPL39P28-201ENST00000465655 155 ntBASIC0.79□□□□□ -2.28
YBX1P67809 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
YBX1P67809 RNA5SP476-201ENST00000516613 103 ntBASIC0.79□□□□□ -2.28
YBX1P67809 RNU6-229P-201ENST00000516614 102 ntBASIC0.79□□□□□ -2.28
YBX1P67809 MIR8087-201ENST00000612745 78 ntBASIC0.79□□□□□ -2.28
YBX1P67809 MIR633-201ENST00000384821 98 ntBASIC0.78□□□□□ -2.28
YBX1P67809 MIR630-201ENST00000384957 97 ntBASIC0.78□□□□□ -2.28
YBX1P67809 MIR936-201ENST00000401264 98 ntBASIC0.78□□□□□ -2.28
YBX1P67809 PSMC1P5-201ENST00000512850 177 ntBASIC0.78□□□□□ -2.28
YBX1P67809 MIR4714-201ENST00000580728 77 ntBASIC0.78□□□□□ -2.28
YBX1P67809 U6.96-201ENST00000636425 70 ntBASIC0.78□□□□□ -2.28
YBX1P67809 MIR20A-201ENST00000362279 71 ntBASIC0.77□□□□□ -2.29
YBX1P67809 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
YBX1P67809 MIR517B-201ENST00000385102 67 ntBASIC0.77□□□□□ -2.29
YBX1P67809 HAR1A.1-201ENST00000459583 118 ntBASIC0.77□□□□□ -2.29
YBX1P67809 MIR466-201ENST00000580653 84 ntBASIC0.77□□□□□ -2.29
YBX1P67809 U7.6-201ENST00000610841 64 ntBASIC0.77□□□□□ -2.29
YBX1P67809 U2.7-201ENST00000619197 100 ntBASIC0.77□□□□□ -2.29
YBX1P67809 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.76□□□□□ -2.29
YBX1P67809 MIR330-201ENST00000362196 94 ntBASIC0.76□□□□□ -2.29
YBX1P67809 MIR518A1-201ENST00000385068 85 ntBASIC0.76□□□□□ -2.29
YBX1P67809 MIR516B1-201ENST00000385211 90 ntBASIC0.76□□□□□ -2.29
YBX1P67809 AC244090.1-201ENST00000441884 93 ntBASIC0.76□□□□□ -2.29
YBX1P67809 RNU4-54P-201ENST00000516428 129 ntBASIC0.76□□□□□ -2.29
YBX1P67809 RNU6-940P-201ENST00000363433 104 ntBASIC0.75□□□□□ -2.29
YBX1P67809 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
YBX1P67809 RNU6-92P-201ENST00000605893 104 ntBASIC0.75□□□□□ -2.29
YBX1P67809 RNU6-1232P-201ENST00000516299 86 ntBASIC0.74□□□□□ -2.29
YBX1P67809 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.74□□□□□ -2.29
YBX1P67809 AC243829.6-201ENST00000612652 106 ntBASIC0.74□□□□□ -2.29
YBX1P67809 SNORD113-2-201ENST00000391082 72 ntBASIC0.73□□□□□ -2.29
YBX1P67809 RNU7-174P-201ENST00000516248 59 ntBASIC0.73□□□□□ -2.29
YBX1P67809 CYP3A54P-201ENST00000566950 75 ntBASIC0.73□□□□□ -2.29
YBX1P67809 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
YBX1P67809 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.72□□□□□ -2.29
YBX1P67809 RNU6-698P-201ENST00000363523 107 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 297 ms