Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MIR7-2-201ENST00000384970 110 ntBASIC0.43□□□□□ -2.34
GFRA1P56159 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
GFRA1P56159 MIR4662A-201ENST00000637499 67 ntBASIC0.43□□□□□ -2.34
GFRA1P56159 MIR20A-201ENST00000362279 71 ntBASIC0.42□□□□□ -2.34
GFRA1P56159 SNORD114-26-201ENST00000363543 72 ntBASIC0.42□□□□□ -2.34
GFRA1P56159 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
GFRA1P56159 RNU6-70P-201ENST00000516438 60 ntBASIC0.42□□□□□ -2.34
GFRA1P56159 MIR3657-201ENST00000584818 117 ntBASIC0.42□□□□□ -2.34
GFRA1P56159 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.42□□□□□ -2.34
GFRA1P56159 SNORA2.1-201ENST00000363089 137 ntBASIC0.41□□□□□ -2.34
GFRA1P56159 SNORD114-23-201ENST00000363536 72 ntBASIC0.41□□□□□ -2.34
GFRA1P56159 RNU6-990P-201ENST00000364385 104 ntBASIC0.41□□□□□ -2.34
GFRA1P56159 AC244090.1-201ENST00000441884 93 ntBASIC0.41□□□□□ -2.34
GFRA1P56159 AC069113.3-201ENST00000521019 150 ntBASIC0.41□□□□□ -2.34
GFRA1P56159 RNU7-188P-201ENST00000517063 64 ntBASIC0.4□□□□□ -2.35
GFRA1P56159 Y_RNA.788-201ENST00000622394 112 ntBASIC0.4□□□□□ -2.35
GFRA1P56159 SNORA75.1-201ENST00000391130 148 ntBASIC0.39□□□□□ -2.35
GFRA1P56159 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.39□□□□□ -2.35
GFRA1P56159 RNU6-411P-201ENST00000384451 107 ntBASIC0.38□□□□□ -2.35
GFRA1P56159 RNU6-127P-201ENST00000390897 107 ntBASIC0.38□□□□□ -2.35
GFRA1P56159 MIR3134-201ENST00000579433 74 ntBASIC0.38□□□□□ -2.35
GFRA1P56159 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
GFRA1P56159 SNORA63.6-201ENST00000364921 119 ntBASIC0.37□□□□□ -2.35
GFRA1P56159 SNORD2-201ENST00000459163 69 ntBASIC0.37□□□□□ -2.35
GFRA1P56159 AC010487.4-201ENST00000637027 61 ntBASIC0.37□□□□□ -2.35
GFRA1P56159 SNORD45.1-201ENST00000363181 77 ntBASIC0.36□□□□□ -2.35
GFRA1P56159 RNU6-776P-201ENST00000364403 104 ntBASIC0.36□□□□□ -2.35
GFRA1P56159 Y_RNA.250-201ENST00000364542 110 ntBASIC0.36□□□□□ -2.35
GFRA1P56159 RNU6-1022P-201ENST00000365049 104 ntBASIC0.36□□□□□ -2.35
GFRA1P56159 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
GFRA1P56159 MIR193B-201ENST00000384907 83 ntBASIC0.36□□□□□ -2.35
GFRA1P56159 MIR889-201ENST00000401280 79 ntBASIC0.36□□□□□ -2.35
GFRA1P56159 MIR548E-201ENST00000408287 88 ntBASIC0.36□□□□□ -2.35
GFRA1P56159 AC021146.9-201ENST00000512503 156 ntBASIC0.36□□□□□ -2.35
GFRA1P56159 RNA5SP134-201ENST00000516492 96 ntBASIC0.36□□□□□ -2.35
GFRA1P56159 RNA5SP147-201ENST00000516493 109 ntBASIC0.36□□□□□ -2.35
GFRA1P56159 RNU6-782P-201ENST00000516852 104 ntBASIC0.36□□□□□ -2.35
GFRA1P56159 MIR3925-201ENST00000584674 77 ntBASIC0.36□□□□□ -2.35
GFRA1P56159 MIR664A-201ENST00000626086 82 ntBASIC0.36□□□□□ -2.35
GFRA1P56159 MIR876-201ENST00000401147 81 ntBASIC0.35□□□□□ -2.35
GFRA1P56159 AC108740.1-201ENST00000498629 225 ntBASIC0.35□□□□□ -2.35
GFRA1P56159 SCARNA11.2-201ENST00000517183 154 ntBASIC0.35□□□□□ -2.35
GFRA1P56159 MIR8053-201ENST00000613344 75 ntBASIC0.35□□□□□ -2.35
GFRA1P56159 MIR4315-1-201ENST00000636800 73 ntBASIC0.35□□□□□ -2.35
GFRA1P56159 MIR4315-2-201ENST00000640925 73 ntBASIC0.35□□□□□ -2.35
GFRA1P56159 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
GFRA1P56159 MIR582-201ENST00000365731 98 ntBASIC0.34□□□□□ -2.36
GFRA1P56159 MIR154-201ENST00000385243 84 ntBASIC0.34□□□□□ -2.36
GFRA1P56159 Y_RNA.545-201ENST00000384652 105 ntBASIC0.33□□□□□ -2.36
GFRA1P56159 MIR643-201ENST00000385267 97 ntBASIC0.33□□□□□ -2.36
GFRA1P56159 RNU6-604P-201ENST00000390917 100 ntBASIC0.33□□□□□ -2.36
GFRA1P56159 RNU6-587P-201ENST00000391282 106 ntBASIC0.33□□□□□ -2.36
GFRA1P56159 MIR6779-201ENST00000617283 64 ntBASIC0.33□□□□□ -2.36
GFRA1P56159 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
GFRA1P56159 Y_RNA.205-201ENST00000364128 113 ntBASIC0.32□□□□□ -2.36
GFRA1P56159 RNU6-1241P-201ENST00000384536 107 ntBASIC0.32□□□□□ -2.36
GFRA1P56159 MIR1273G-201ENST00000577677 100 ntBASIC0.32□□□□□ -2.36
GFRA1P56159 snoU13.13-201ENST00000458842 104 ntBASIC0.31□□□□□ -2.36
GFRA1P56159 SNORA40.17-201ENST00000517256 115 ntBASIC0.31□□□□□ -2.36
GFRA1P56159 MIR892B-201ENST00000401279 77 ntBASIC0.3□□□□□ -2.36
GFRA1P56159 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.3□□□□□ -2.36
GFRA1P56159 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.3□□□□□ -2.36
GFRA1P56159 RNU6-1296P-201ENST00000383879 107 ntBASIC0.29□□□□□ -2.36
GFRA1P56159 SNORA15B-2-201ENST00000384058 135 ntBASIC0.29□□□□□ -2.36
GFRA1P56159 SNORA15B-1-201ENST00000384334 135 ntBASIC0.29□□□□□ -2.36
GFRA1P56159 MIR610-201ENST00000385139 96 ntBASIC0.29□□□□□ -2.36
GFRA1P56159 RN7SL660P-201ENST00000614852 299 ntBASIC0.29□□□□□ -2.36
GFRA1P56159 RNA5SP325-201ENST00000363756 130 ntBASIC0.28□□□□□ -2.36
GFRA1P56159 RNU6-1162P-201ENST00000384443 104 ntBASIC0.28□□□□□ -2.36
GFRA1P56159 RNU6-175P-201ENST00000516896 107 ntBASIC0.28□□□□□ -2.36
GFRA1P56159 RNU6-687P-201ENST00000516443 89 ntBASIC0.27□□□□□ -2.37
GFRA1P56159 RNU6-1015P-201ENST00000517121 99 ntBASIC0.27□□□□□ -2.37
GFRA1P56159 MIR6739-201ENST00000622461 75 ntBASIC0.27□□□□□ -2.37
GFRA1P56159 SNORD115-22-201ENST00000364456 82 ntBASIC0.26□□□□□ -2.37
GFRA1P56159 RNU6-1036P-201ENST00000383959 104 ntBASIC0.26□□□□□ -2.37
GFRA1P56159 RNU6-871P-201ENST00000516122 100 ntBASIC0.26□□□□□ -2.37
GFRA1P56159 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.26□□□□□ -2.37
GFRA1P56159 MIR924-201ENST00000638017 53 ntBASIC0.26□□□□□ -2.37
GFRA1P56159 Y_RNA.633-201ENST00000459107 95 ntBASIC0.25□□□□□ -2.37
GFRA1P56159 SNORA42.1-201ENST00000363515 137 ntBASIC0.24□□□□□ -2.37
GFRA1P56159 RNU6-895P-201ENST00000384125 103 ntBASIC0.24□□□□□ -2.37
GFRA1P56159 SNORD45A-201ENST00000384512 84 ntBASIC0.24□□□□□ -2.37
GFRA1P56159 Y_RNA.565-201ENST00000384719 101 ntBASIC0.24□□□□□ -2.37
GFRA1P56159 MIR521-2-201ENST00000384818 87 ntBASIC0.24□□□□□ -2.37
GFRA1P56159 MIR106A-201ENST00000384870 81 ntBASIC0.24□□□□□ -2.37
GFRA1P56159 RNU6-881P-201ENST00000516813 102 ntBASIC0.24□□□□□ -2.37
GFRA1P56159 SNORA62.5-201ENST00000516634 120 ntBASIC0.23□□□□□ -2.37
GFRA1P56159 MIR4743-201ENST00000584576 69 ntBASIC0.23□□□□□ -2.37
GFRA1P56159 AC104408.1-201ENST00000605241 170 ntBASIC0.23□□□□□ -2.37
GFRA1P56159 MIR6514-201ENST00000622549 70 ntBASIC0.23□□□□□ -2.37
GFRA1P56159 U6.96-201ENST00000636425 70 ntBASIC0.23□□□□□ -2.37
GFRA1P56159 MIR330-201ENST00000362196 94 ntBASIC0.22□□□□□ -2.37
GFRA1P56159 SNORD113.1-201ENST00000363280 73 ntBASIC0.22□□□□□ -2.37
GFRA1P56159 RNU6-645P-201ENST00000364649 106 ntBASIC0.22□□□□□ -2.37
GFRA1P56159 RNA5SP163-201ENST00000410304 99 ntBASIC0.22□□□□□ -2.37
GFRA1P56159 MTND4LP1-201ENST00000446263 157 ntBASIC0.22□□□□□ -2.37
GFRA1P56159 RNU6-634P-201ENST00000459134 106 ntBASIC0.22□□□□□ -2.37
GFRA1P56159 MIR8087-201ENST00000612745 78 ntBASIC0.22□□□□□ -2.37
GFRA1P56159 RNA5SP98-201ENST00000363158 137 ntBASIC0.21□□□□□ -2.38
GFRA1P56159 RNA5SP214-201ENST00000363378 118 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms