Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SNORD71-201ENST00000411292 86 ntBASIC0.47□□□□□ -2.33
MMP13P45452 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
MMP13P45452 RNU6-656P-201ENST00000516785 107 ntBASIC0.47□□□□□ -2.33
MMP13P45452 MIR4677-201ENST00000584153 80 ntBASIC0.47□□□□□ -2.33
MMP13P45452 MIR6513-201ENST00000621188 64 ntBASIC0.47□□□□□ -2.33
MMP13P45452 MIR760-201ENST00000390220 80 ntBASIC0.46□□□□□ -2.34
MMP13P45452 AC073261.1-201ENST00000429409 121 ntBASIC0.46□□□□□ -2.34
MMP13P45452 Y_RNA.633-201ENST00000459107 95 ntBASIC0.46□□□□□ -2.34
MMP13P45452 RNU6-175P-201ENST00000516896 107 ntBASIC0.46□□□□□ -2.34
MMP13P45452 MIR3925-201ENST00000584674 77 ntBASIC0.46□□□□□ -2.34
MMP13P45452 MIR6515-201ENST00000619843 57 ntBASIC0.46□□□□□ -2.34
MMP13P45452 MIR499B-201ENST00000636498 73 ntBASIC0.46□□□□□ -2.34
MMP13P45452 Y_RNA.118-201ENST00000363300 101 ntBASIC0.45□□□□□ -2.34
MMP13P45452 SNORA49-201ENST00000386157 136 ntBASIC0.45□□□□□ -2.34
MMP13P45452 uc_338.10-201ENST00000621872 182 ntBASIC0.45□□□□□ -2.34
MMP13P45452 MIR6739-201ENST00000622461 75 ntBASIC0.45□□□□□ -2.34
MMP13P45452 MIRLET7D-201ENST00000362263 87 ntBASIC0.44□□□□□ -2.34
MMP13P45452 RNU6-645P-201ENST00000364649 106 ntBASIC0.44□□□□□ -2.34
MMP13P45452 MIR7-2-201ENST00000384970 110 ntBASIC0.44□□□□□ -2.34
MMP13P45452 MIR516B1-201ENST00000385211 90 ntBASIC0.44□□□□□ -2.34
MMP13P45452 RNU6-663P-201ENST00000391105 106 ntBASIC0.44□□□□□ -2.34
MMP13P45452 RNU7-188P-201ENST00000517063 64 ntBASIC0.44□□□□□ -2.34
MMP13P45452 MIR548AD-201ENST00000584780 82 ntBASIC0.44□□□□□ -2.34
MMP13P45452 MIR8053-201ENST00000613344 75 ntBASIC0.44□□□□□ -2.34
MMP13P45452 AC090617.8-201ENST00000623339 167 ntBASIC0.44□□□□□ -2.34
MMP13P45452 SNORD114-4-201ENST00000363962 75 ntBASIC0.43□□□□□ -2.34
MMP13P45452 RNA5SP128-201ENST00000365305 116 ntBASIC0.43□□□□□ -2.34
MMP13P45452 RNU6-815P-201ENST00000384080 113 ntBASIC0.43□□□□□ -2.34
MMP13P45452 SNORD30.1-201ENST00000391309 70 ntBASIC0.43□□□□□ -2.34
MMP13P45452 AC021146.9-201ENST00000512503 156 ntBASIC0.43□□□□□ -2.34
MMP13P45452 RNU6-539P-201ENST00000516665 103 ntBASIC0.43□□□□□ -2.34
MMP13P45452 RN7SL660P-201ENST00000614852 299 ntBASIC0.43□□□□□ -2.34
MMP13P45452 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.43□□□□□ -2.34
MMP13P45452 SNORA33.1-201ENST00000364957 130 ntBASIC0.42□□□□□ -2.34
MMP13P45452 RNA5SP436-201ENST00000516020 115 ntBASIC0.42□□□□□ -2.34
MMP13P45452 RNU6-871P-201ENST00000516122 100 ntBASIC0.42□□□□□ -2.34
MMP13P45452 AC243829.3-201ENST00000622177 108 ntBASIC0.42□□□□□ -2.34
MMP13P45452 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
MMP13P45452 SNORA63.6-201ENST00000364921 119 ntBASIC0.41□□□□□ -2.34
MMP13P45452 RNU6-649P-201ENST00000384463 107 ntBASIC0.41□□□□□ -2.34
MMP13P45452 RNU7-129P-201ENST00000516128 62 ntBASIC0.41□□□□□ -2.34
MMP13P45452 AC005520.4-201ENST00000604337 90 ntBASIC0.41□□□□□ -2.34
MMP13P45452 MIR5087-201ENST00000635826 76 ntBASIC0.41□□□□□ -2.34
MMP13P45452 U6.111-201ENST00000636093 83 ntBASIC0.41□□□□□ -2.34
MMP13P45452 RNU6-1216P-201ENST00000362590 107 ntBASIC0.4□□□□□ -2.35
MMP13P45452 MIR598-201ENST00000384868 97 ntBASIC0.4□□□□□ -2.35
MMP13P45452 MIR936-201ENST00000401264 98 ntBASIC0.4□□□□□ -2.35
MMP13P45452 RNU6-848P-201ENST00000515948 107 ntBASIC0.4□□□□□ -2.35
MMP13P45452 RNU6-617P-201ENST00000516147 107 ntBASIC0.4□□□□□ -2.35
MMP13P45452 RNU6-473P-201ENST00000516164 107 ntBASIC0.4□□□□□ -2.35
MMP13P45452 RNU6-1049P-201ENST00000516414 107 ntBASIC0.4□□□□□ -2.35
MMP13P45452 RNU6-895P-201ENST00000384125 103 ntBASIC0.39□□□□□ -2.35
MMP13P45452 MIR521-2-201ENST00000384818 87 ntBASIC0.39□□□□□ -2.35
MMP13P45452 MIR4711-201ENST00000578274 70 ntBASIC0.39□□□□□ -2.35
MMP13P45452 RNU6-127P-201ENST00000390897 107 ntBASIC0.38□□□□□ -2.35
MMP13P45452 RNU6-630P-201ENST00000391258 106 ntBASIC0.38□□□□□ -2.35
MMP13P45452 MIR548H2-201ENST00000408874 88 ntBASIC0.38□□□□□ -2.35
MMP13P45452 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
MMP13P45452 MIR20A-201ENST00000362279 71 ntBASIC0.37□□□□□ -2.35
MMP13P45452 Y_RNA.443-201ENST00000384135 111 ntBASIC0.37□□□□□ -2.35
MMP13P45452 RNU6-800P-201ENST00000384473 103 ntBASIC0.37□□□□□ -2.35
MMP13P45452 RNU6-337P-201ENST00000391243 106 ntBASIC0.37□□□□□ -2.35
MMP13P45452 MIR876-201ENST00000401147 81 ntBASIC0.37□□□□□ -2.35
MMP13P45452 MIR1265-201ENST00000408444 86 ntBASIC0.37□□□□□ -2.35
MMP13P45452 RNA5SP193-201ENST00000410353 107 ntBASIC0.37□□□□□ -2.35
MMP13P45452 AC244090.1-201ENST00000441884 93 ntBASIC0.37□□□□□ -2.35
MMP13P45452 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
MMP13P45452 Y_RNA.250-201ENST00000364542 110 ntBASIC0.36□□□□□ -2.35
MMP13P45452 MIR489-201ENST00000384923 84 ntBASIC0.36□□□□□ -2.35
MMP13P45452 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
MMP13P45452 RNU6-1036P-201ENST00000383959 104 ntBASIC0.35□□□□□ -2.35
MMP13P45452 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
MMP13P45452 SCARNA11.2-201ENST00000517183 154 ntBASIC0.35□□□□□ -2.35
MMP13P45452 U7.6-201ENST00000610841 64 ntBASIC0.35□□□□□ -2.35
MMP13P45452 AC084368.1-201ENST00000620935 65 ntBASIC0.35□□□□□ -2.35
MMP13P45452 AC090625.1-201ENST00000357130 210 ntBASIC0.34□□□□□ -2.36
MMP13P45452 SNORD114-29-201ENST00000364819 70 ntBASIC0.34□□□□□ -2.36
MMP13P45452 MIR216A-201ENST00000385063 110 ntBASIC0.34□□□□□ -2.36
MMP13P45452 AC108740.1-201ENST00000498629 225 ntBASIC0.34□□□□□ -2.36
MMP13P45452 AC069113.3-201ENST00000521019 150 ntBASIC0.34□□□□□ -2.36
MMP13P45452 U2.7-201ENST00000619197 100 ntBASIC0.34□□□□□ -2.36
MMP13P45452 SNORA9.1-201ENST00000362412 131 ntBASIC0.33□□□□□ -2.36
MMP13P45452 RNA5SP62-201ENST00000363457 110 ntBASIC0.33□□□□□ -2.36
MMP13P45452 RNU6-668P-201ENST00000364180 107 ntBASIC0.33□□□□□ -2.36
MMP13P45452 VTRNA1-3-201ENST00000365645 89 ntBASIC0.33□□□□□ -2.36
MMP13P45452 MIR643-201ENST00000385267 97 ntBASIC0.33□□□□□ -2.36
MMP13P45452 RNU6-1089P-201ENST00000516473 104 ntBASIC0.33□□□□□ -2.36
MMP13P45452 Y_RNA.375-201ENST00000365625 101 ntBASIC0.32□□□□□ -2.36
MMP13P45452 RNU6-1162P-201ENST00000384443 104 ntBASIC0.32□□□□□ -2.36
MMP13P45452 PVT1_3.1-201ENST00000620853 95 ntBASIC0.32□□□□□ -2.36
MMP13P45452 SNORA25.4-201ENST00000363666 124 ntBASIC0.31□□□□□ -2.36
MMP13P45452 RNU6-590P-201ENST00000365039 107 ntBASIC0.31□□□□□ -2.36
MMP13P45452 SNORA15B-2-201ENST00000384058 135 ntBASIC0.31□□□□□ -2.36
MMP13P45452 SNORA15B-1-201ENST00000384334 135 ntBASIC0.31□□□□□ -2.36
MMP13P45452 RNU6-788P-201ENST00000390967 104 ntBASIC0.31□□□□□ -2.36
MMP13P45452 MTND4LP1-201ENST00000446263 157 ntBASIC0.31□□□□□ -2.36
MMP13P45452 RNU6-782P-201ENST00000516852 104 ntBASIC0.31□□□□□ -2.36
MMP13P45452 CYP3A54P-201ENST00000566950 75 ntBASIC0.31□□□□□ -2.36
MMP13P45452 RNU6-502P-201ENST00000362419 108 ntBASIC0.3□□□□□ -2.36
MMP13P45452 SNORD114-23-201ENST00000363536 72 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms