Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.64□□□□□ -2.31
CCNFP41002 Y_RNA.125-201ENST00000363371 111 ntBASIC0.63□□□□□ -2.31
CCNFP41002 snoU13.13-201ENST00000458842 104 ntBASIC0.63□□□□□ -2.31
CCNFP41002 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.63□□□□□ -2.31
CCNFP41002 RNA5SP347-201ENST00000362445 119 ntBASIC0.62□□□□□ -2.31
CCNFP41002 SNORD44.1-201ENST00000363202 61 ntBASIC0.62□□□□□ -2.31
CCNFP41002 MIR516B1-201ENST00000385211 90 ntBASIC0.62□□□□□ -2.31
CCNFP41002 RNU6-863P-201ENST00000515989 104 ntBASIC0.62□□□□□ -2.31
CCNFP41002 RNU6-687P-201ENST00000516443 89 ntBASIC0.62□□□□□ -2.31
CCNFP41002 MIR499B-201ENST00000636498 73 ntBASIC0.62□□□□□ -2.31
CCNFP41002 MIR103A1-201ENST00000362165 78 ntBASIC0.61□□□□□ -2.31
CCNFP41002 Y_RNA.30-201ENST00000362572 97 ntBASIC0.61□□□□□ -2.31
CCNFP41002 Y_RNA.115-201ENST00000363272 98 ntBASIC0.61□□□□□ -2.31
CCNFP41002 SNORD45A-201ENST00000384512 84 ntBASIC0.61□□□□□ -2.31
CCNFP41002 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.61□□□□□ -2.31
CCNFP41002 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
CCNFP41002 MIR8053-201ENST00000613344 75 ntBASIC0.6□□□□□ -2.31
CCNFP41002 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
CCNFP41002 MIR330-201ENST00000362196 94 ntBASIC0.59□□□□□ -2.31
CCNFP41002 RNU6-895P-201ENST00000384125 103 ntBASIC0.59□□□□□ -2.31
CCNFP41002 MIR501-201ENST00000390204 84 ntBASIC0.59□□□□□ -2.31
CCNFP41002 RNU6-848P-201ENST00000515948 107 ntBASIC0.59□□□□□ -2.31
CCNFP41002 RNU6-871P-201ENST00000516122 100 ntBASIC0.59□□□□□ -2.31
CCNFP41002 RNU6-617P-201ENST00000516147 107 ntBASIC0.59□□□□□ -2.31
CCNFP41002 RNU6-473P-201ENST00000516164 107 ntBASIC0.59□□□□□ -2.31
CCNFP41002 RNU6-523P-201ENST00000516304 54 ntBASIC0.59□□□□□ -2.31
CCNFP41002 RNU6-1049P-201ENST00000516414 107 ntBASIC0.59□□□□□ -2.31
CCNFP41002 uc_338.17-201ENST00000619633 179 ntBASIC0.59□□□□□ -2.31
CCNFP41002 Y_RNA.68-201ENST00000362881 102 ntBASIC0.58□□□□□ -2.32
CCNFP41002 SNORA2.1-201ENST00000363089 137 ntBASIC0.58□□□□□ -2.32
CCNFP41002 RNA5SP128-201ENST00000365305 116 ntBASIC0.58□□□□□ -2.32
CCNFP41002 MIR4711-201ENST00000578274 70 ntBASIC0.58□□□□□ -2.32
CCNFP41002 MIR8087-201ENST00000612745 78 ntBASIC0.58□□□□□ -2.32
CCNFP41002 AC084368.1-201ENST00000620935 65 ntBASIC0.58□□□□□ -2.32
CCNFP41002 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.58□□□□□ -2.32
CCNFP41002 SNORD115-22-201ENST00000364456 82 ntBASIC0.57□□□□□ -2.32
CCNFP41002 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
CCNFP41002 AC021146.9-201ENST00000512503 156 ntBASIC0.57□□□□□ -2.32
CCNFP41002 RNA5SP330-201ENST00000517096 96 ntBASIC0.57□□□□□ -2.32
CCNFP41002 MIR4677-201ENST00000584153 80 ntBASIC0.57□□□□□ -2.32
CCNFP41002 AL109933.3-201ENST00000619095 188 ntBASIC0.57□□□□□ -2.32
CCNFP41002 MIRLET7D-201ENST00000362263 87 ntBASIC0.56□□□□□ -2.32
CCNFP41002 Y_RNA.178-201ENST00000363832 102 ntBASIC0.56□□□□□ -2.32
CCNFP41002 AC073261.1-201ENST00000429409 121 ntBASIC0.56□□□□□ -2.32
CCNFP41002 RNU6-881P-201ENST00000516813 102 ntBASIC0.56□□□□□ -2.32
CCNFP41002 RNU7-188P-201ENST00000517063 64 ntBASIC0.56□□□□□ -2.32
CCNFP41002 SNORD115-31-201ENST00000365318 82 ntBASIC0.55□□□□□ -2.32
CCNFP41002 MIR582-201ENST00000365731 98 ntBASIC0.55□□□□□ -2.32
CCNFP41002 MIR20A-201ENST00000362279 71 ntBASIC0.54□□□□□ -2.32
CCNFP41002 RNA5SP257-201ENST00000363023 116 ntBASIC0.54□□□□□ -2.32
CCNFP41002 SNORD114-29-201ENST00000364819 70 ntBASIC0.54□□□□□ -2.32
CCNFP41002 RNU6-634P-201ENST00000459134 106 ntBASIC0.54□□□□□ -2.32
CCNFP41002 RNU6-982P-201ENST00000516216 102 ntBASIC0.54□□□□□ -2.32
CCNFP41002 MIR5087-201ENST00000635826 76 ntBASIC0.54□□□□□ -2.32
CCNFP41002 SNORA9.1-201ENST00000362412 131 ntBASIC0.53□□□□□ -2.32
CCNFP41002 SNORD113.1-201ENST00000363280 73 ntBASIC0.53□□□□□ -2.32
CCNFP41002 RNA5SP62-201ENST00000363457 110 ntBASIC0.53□□□□□ -2.32
CCNFP41002 Y_RNA.433-201ENST00000384089 102 ntBASIC0.53□□□□□ -2.32
CCNFP41002 SNORD30.1-201ENST00000391309 70 ntBASIC0.53□□□□□ -2.32
CCNFP41002 MIR548E-201ENST00000408287 88 ntBASIC0.53□□□□□ -2.32
CCNFP41002 SNORA40.17-201ENST00000517256 115 ntBASIC0.53□□□□□ -2.32
CCNFP41002 AC243829.3-201ENST00000622177 108 ntBASIC0.53□□□□□ -2.32
CCNFP41002 AC090625.1-201ENST00000357130 210 ntBASIC0.52□□□□□ -2.33
CCNFP41002 SNORA63.6-201ENST00000364921 119 ntBASIC0.52□□□□□ -2.33
CCNFP41002 RNA5SP193-201ENST00000410353 107 ntBASIC0.52□□□□□ -2.33
CCNFP41002 MIR548AD-201ENST00000584780 82 ntBASIC0.52□□□□□ -2.33
CCNFP41002 RNU6-815P-201ENST00000384080 113 ntBASIC0.51□□□□□ -2.33
CCNFP41002 RNU6-645P-201ENST00000364649 106 ntBASIC0.5□□□□□ -2.33
CCNFP41002 AC244090.1-201ENST00000441884 93 ntBASIC0.5□□□□□ -2.33
CCNFP41002 RNU6-1162P-201ENST00000384443 104 ntBASIC0.49□□□□□ -2.33
CCNFP41002 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
CCNFP41002 RNU6-540P-201ENST00000384622 101 ntBASIC0.48□□□□□ -2.33
CCNFP41002 MIR643-201ENST00000385267 97 ntBASIC0.48□□□□□ -2.33
CCNFP41002 RNU6-663P-201ENST00000391105 106 ntBASIC0.48□□□□□ -2.33
CCNFP41002 MTND4LP1-201ENST00000446263 157 ntBASIC0.48□□□□□ -2.33
CCNFP41002 MIR3925-201ENST00000584674 77 ntBASIC0.48□□□□□ -2.33
CCNFP41002 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.48□□□□□ -2.33
CCNFP41002 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.48□□□□□ -2.33
CCNFP41002 RNU6-1216P-201ENST00000362590 107 ntBASIC0.47□□□□□ -2.33
CCNFP41002 RNU6-649P-201ENST00000384463 107 ntBASIC0.47□□□□□ -2.33
CCNFP41002 SCARNA11.2-201ENST00000517183 154 ntBASIC0.47□□□□□ -2.33
CCNFP41002 Y_RNA.250-201ENST00000364542 110 ntBASIC0.46□□□□□ -2.34
CCNFP41002 SNORA50A-201ENST00000384225 134 ntBASIC0.46□□□□□ -2.34
CCNFP41002 MIR548C-201ENST00000384815 97 ntBASIC0.46□□□□□ -2.34
CCNFP41002 RNU6-127P-201ENST00000390897 107 ntBASIC0.46□□□□□ -2.34
CCNFP41002 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
CCNFP41002 AC243829.6-201ENST00000612652 106 ntBASIC0.46□□□□□ -2.34
CCNFP41002 RNU6-1327P-201ENST00000365302 105 ntBASIC0.45□□□□□ -2.34
CCNFP41002 VTRNA1-3-201ENST00000365645 89 ntBASIC0.45□□□□□ -2.34
CCNFP41002 AC114801.3-201ENST00000510231 177 ntBASIC0.45□□□□□ -2.34
CCNFP41002 SNORA62.5-201ENST00000516634 120 ntBASIC0.45□□□□□ -2.34
CCNFP41002 MIR6739-201ENST00000622461 75 ntBASIC0.45□□□□□ -2.34
CCNFP41002 U6.96-201ENST00000636425 70 ntBASIC0.45□□□□□ -2.34
CCNFP41002 RNU6-668P-201ENST00000364180 107 ntBASIC0.44□□□□□ -2.34
CCNFP41002 SNORA15B-2-201ENST00000384058 135 ntBASIC0.44□□□□□ -2.34
CCNFP41002 SNORA15B-1-201ENST00000384334 135 ntBASIC0.44□□□□□ -2.34
CCNFP41002 RN7SL660P-201ENST00000614852 299 ntBASIC0.44□□□□□ -2.34
CCNFP41002 SNORA33.1-201ENST00000364957 130 ntBASIC0.43□□□□□ -2.34
CCNFP41002 RNU6-1036P-201ENST00000383959 104 ntBASIC0.43□□□□□ -2.34
CCNFP41002 MIR521-2-201ENST00000384818 87 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 282.9 ms