Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 Y_RNA.258-201ENST00000364613 105 ntBASIC0.1□□□□□ -2.39
VAMP1P23763 Y_RNA.433-201ENST00000384089 102 ntBASIC0.1□□□□□ -2.39
VAMP1P23763 SNORD2-201ENST00000459163 69 ntBASIC0.1□□□□□ -2.39
VAMP1P23763 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.1□□□□□ -2.39
VAMP1P23763 U6.81-201ENST00000612550 106 ntBASIC0.09□□□□□ -2.4
VAMP1P23763 RNA5SP285-201ENST00000516619 119 ntBASIC0.08□□□□□ -2.4
VAMP1P23763 MIR6509-201ENST00000614603 85 ntBASIC0.08□□□□□ -2.4
VAMP1P23763 RNU6-686P-201ENST00000364839 107 ntBASIC0.07□□□□□ -2.4
VAMP1P23763 RNU6-1276P-201ENST00000365372 104 ntBASIC0.07□□□□□ -2.4
VAMP1P23763 Y_RNA.374-201ENST00000365606 101 ntBASIC0.07□□□□□ -2.4
VAMP1P23763 RNU6-979P-201ENST00000383896 107 ntBASIC0.07□□□□□ -2.4
VAMP1P23763 MIR329-2-201ENST00000385029 84 ntBASIC0.07□□□□□ -2.4
VAMP1P23763 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.07□□□□□ -2.4
VAMP1P23763 RNA5SP395-201ENST00000516567 118 ntBASIC0.07□□□□□ -2.4
VAMP1P23763 RNU6-557P-201ENST00000516842 110 ntBASIC0.07□□□□□ -2.4
VAMP1P23763 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.07□□□□□ -2.4
VAMP1P23763 RNU6-340P-201ENST00000364005 107 ntBASIC0.06□□□□□ -2.4
VAMP1P23763 SNORD73B-201ENST00000364394 72 ntBASIC0.06□□□□□ -2.4
VAMP1P23763 RNU6-1036P-201ENST00000383959 104 ntBASIC0.05□□□□□ -2.4
VAMP1P23763 SNORA26.2-201ENST00000390922 122 ntBASIC0.05□□□□□ -2.4
VAMP1P23763 CR383656.4-201ENST00000546909 122 ntBASIC0.05□□□□□ -2.4
VAMP1P23763 RN7SL660P-201ENST00000614852 299 ntBASIC0.05□□□□□ -2.4
VAMP1P23763 Y_RNA.606-201ENST00000410579 103 ntBASIC0.04□□□□□ -2.4
VAMP1P23763 RNU6-752P-201ENST00000516376 102 ntBASIC0.04□□□□□ -2.4
VAMP1P23763 RNU6-1039P-201ENST00000383931 107 ntBASIC0.03□□□□□ -2.4
VAMP1P23763 RNU7-171P-201ENST00000459581 62 ntBASIC0.03□□□□□ -2.4
VAMP1P23763 AC062037.1-201ENST00000605302 128 ntBASIC0.03□□□□□ -2.4
VAMP1P23763 RNA5SP98-201ENST00000363158 137 ntBASIC0.02□□□□□ -2.41
VAMP1P23763 MIR203A-201ENST00000384836 110 ntBASIC0.02□□□□□ -2.41
VAMP1P23763 RNU6-807P-201ENST00000516805 107 ntBASIC0.01□□□□□ -2.41
VAMP1P23763 MIR5190-201ENST00000581537 80 ntBASIC0.01□□□□□ -2.41
VAMP1P23763 Y_RNA.30-201ENST00000362572 97 ntBASIC0□□□□□ -2.41
VAMP1P23763 SNORA63.6-201ENST00000364921 119 ntBASIC0□□□□□ -2.41
VAMP1P23763 RNU6-260P-201ENST00000384092 107 ntBASIC0□□□□□ -2.41
VAMP1P23763 AC021146.9-201ENST00000512503 156 ntBASIC0□□□□□ -2.41
VAMP1P23763 MIR148A-201ENST00000362215 68 ntBASIC-0.01□□□□□ -2.41
VAMP1P23763 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.01□□□□□ -2.41
VAMP1P23763 MIR106A-201ENST00000384870 81 ntBASIC-0.01□□□□□ -2.41
VAMP1P23763 RNU6-303P-201ENST00000517091 106 ntBASIC-0.01□□□□□ -2.41
VAMP1P23763 IGLVI-20-201ENST00000519296 130 ntBASIC-0.01□□□□□ -2.41
VAMP1P23763 RNU6-990P-201ENST00000364385 104 ntBASIC-0.02□□□□□ -2.41
VAMP1P23763 RNU6-180P-201ENST00000516697 61 ntBASIC-0.02□□□□□ -2.41
VAMP1P23763 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
VAMP1P23763 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.03□□□□□ -2.41
VAMP1P23763 RNU6-302P-201ENST00000365249 107 ntBASIC-0.03□□□□□ -2.41
VAMP1P23763 MIR548E-201ENST00000408287 88 ntBASIC-0.03□□□□□ -2.41
VAMP1P23763 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.03□□□□□ -2.41
VAMP1P23763 RNU7-165P-201ENST00000458864 60 ntBASIC-0.03□□□□□ -2.41
VAMP1P23763 AC104692.1-201ENST00000472406 90 ntBASIC-0.03□□□□□ -2.41
VAMP1P23763 RNU6-175P-201ENST00000516896 107 ntBASIC-0.03□□□□□ -2.41
VAMP1P23763 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.04□□□□□ -2.42
VAMP1P23763 RNU6-929P-201ENST00000384429 107 ntBASIC-0.04□□□□□ -2.42
VAMP1P23763 MIR548H2-201ENST00000408874 88 ntBASIC-0.04□□□□□ -2.42
VAMP1P23763 RNA5SP147-201ENST00000516493 109 ntBASIC-0.04□□□□□ -2.42
VAMP1P23763 MIR6718-201ENST00000616153 80 ntBASIC-0.04□□□□□ -2.42
VAMP1P23763 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.05□□□□□ -2.42
VAMP1P23763 RNU6-315P-201ENST00000362666 107 ntBASIC-0.05□□□□□ -2.42
VAMP1P23763 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.05□□□□□ -2.42
VAMP1P23763 RNU6-478P-201ENST00000363904 110 ntBASIC-0.05□□□□□ -2.42
VAMP1P23763 MIR582-201ENST00000365731 98 ntBASIC-0.05□□□□□ -2.42
VAMP1P23763 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
VAMP1P23763 RNY4P29-201ENST00000410801 97 ntBASIC-0.05□□□□□ -2.42
VAMP1P23763 AP000676.1-201ENST00000533307 52 ntBASIC-0.05□□□□□ -2.42
VAMP1P23763 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
VAMP1P23763 MIR1297-201ENST00000637311 77 ntBASIC-0.05□□□□□ -2.42
VAMP1P23763 MIR4667-201ENST00000578933 66 ntBASIC-0.06□□□□□ -2.42
VAMP1P23763 MIR3657-201ENST00000584818 117 ntBASIC-0.07□□□□□ -2.42
VAMP1P23763 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.07□□□□□ -2.42
VAMP1P23763 SNORA2.1-201ENST00000363089 137 ntBASIC-0.08□□□□□ -2.42
VAMP1P23763 RNU6-35P-201ENST00000384530 107 ntBASIC-0.08□□□□□ -2.42
VAMP1P23763 MIR1302-4-201ENST00000408701 150 ntBASIC-0.08□□□□□ -2.42
VAMP1P23763 MIR2909-201ENST00000617113 69 ntBASIC-0.08□□□□□ -2.42
VAMP1P23763 MIR1245B-201ENST00000636115 69 ntBASIC-0.08□□□□□ -2.42
VAMP1P23763 snoU13.13-201ENST00000458842 104 ntBASIC-0.09□□□□□ -2.42
VAMP1P23763 MIR4290-201ENST00000583807 95 ntBASIC-0.09□□□□□ -2.42
VAMP1P23763 SNORD115-25-201ENST00000362619 82 ntBASIC-0.1□□□□□ -2.43
VAMP1P23763 RNU6-46P-201ENST00000383860 107 ntBASIC-0.1□□□□□ -2.43
VAMP1P23763 MIR1265-201ENST00000408444 86 ntBASIC-0.1□□□□□ -2.43
VAMP1P23763 MIR4484-201ENST00000582855 83 ntBASIC-0.1□□□□□ -2.43
VAMP1P23763 MIR1295B-201ENST00000636144 60 ntBASIC-0.1□□□□□ -2.43
VAMP1P23763 MIR6759-201ENST00000638110 65 ntBASIC-0.1□□□□□ -2.43
VAMP1P23763 SNORD114-31-201ENST00000363219 75 ntBASIC-0.11□□□□□ -2.43
VAMP1P23763 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.11□□□□□ -2.43
VAMP1P23763 SNORA8.1-201ENST00000384250 140 ntBASIC-0.11□□□□□ -2.43
VAMP1P23763 Z95118.1-201ENST00000421372 247 ntBASIC-0.11□□□□□ -2.43
VAMP1P23763 U6.96-201ENST00000636425 70 ntBASIC-0.11□□□□□ -2.43
VAMP1P23763 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.12□□□□□ -2.43
VAMP1P23763 MIR4666B-201ENST00000578142 81 ntBASIC-0.12□□□□□ -2.43
VAMP1P23763 MIR3675-201ENST00000583661 73 ntBASIC-0.12□□□□□ -2.43
VAMP1P23763 MIR3202-2-201ENST00000635980 79 ntBASIC-0.12□□□□□ -2.43
VAMP1P23763 RNA5SP173-201ENST00000364857 136 ntBASIC-0.13□□□□□ -2.43
VAMP1P23763 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.13□□□□□ -2.43
VAMP1P23763 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.13□□□□□ -2.43
VAMP1P23763 MIR4679-1-201ENST00000637619 75 ntBASIC-0.13□□□□□ -2.43
VAMP1P23763 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.15□□□□□ -2.43
VAMP1P23763 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.15□□□□□ -2.43
VAMP1P23763 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.15□□□□□ -2.43
VAMP1P23763 MIR5589-201ENST00000579442 60 ntBASIC-0.15□□□□□ -2.43
VAMP1P23763 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.15□□□□□ -2.43
VAMP1P23763 SNORD114-12-201ENST00000365400 75 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 234.6 ms