Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RNU4-32P-201ENST00000363404 141 ntBASIC-0.98□□□□□ -2.57
XRCC1P18887 RNU6-337P-201ENST00000391243 106 ntBASIC-0.98□□□□□ -2.57
XRCC1P18887 SCARNA18B-201ENST00000458806 135 ntBASIC-0.98□□□□□ -2.57
XRCC1P18887 SCARNA23-201ENST00000516060 130 ntBASIC-0.98□□□□□ -2.57
XRCC1P18887 RNU6-795P-201ENST00000516323 103 ntBASIC-0.98□□□□□ -2.57
XRCC1P18887 AC006254.2-201ENST00000603259 279 ntBASIC-0.98□□□□□ -2.57
XRCC1P18887 AC012531.4-201ENST00000616509 177 ntBASIC-0.98□□□□□ -2.57
XRCC1P18887 RNA5SP192-201ENST00000364404 120 ntBASIC-0.99□□□□□ -2.57
XRCC1P18887 AL078595.1-201ENST00000404458 226 ntBASIC-0.99□□□□□ -2.57
XRCC1P18887 SNORA18.5-201ENST00000516616 101 ntBASIC-0.99□□□□□ -2.57
XRCC1P18887 Y_RNA.218-201ENST00000364218 104 ntBASIC-1□□□□□ -2.57
XRCC1P18887 SNORD58A-201ENST00000383875 65 ntBASIC-1□□□□□ -2.57
XRCC1P18887 Y_RNA.583-201ENST00000391033 113 ntBASIC-1□□□□□ -2.57
XRCC1P18887 MIR4320-201ENST00000636981 65 ntBASIC-1□□□□□ -2.57
XRCC1P18887 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.01□□□□□ -2.57
XRCC1P18887 SNORD116-14-201ENST00000383894 92 ntBASIC-1.01□□□□□ -2.57
XRCC1P18887 SNORD116-17-201ENST00000383929 92 ntBASIC-1.01□□□□□ -2.57
XRCC1P18887 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.01□□□□□ -2.57
XRCC1P18887 SNORD116-15-201ENST00000384445 92 ntBASIC-1.01□□□□□ -2.57
XRCC1P18887 SNORD116-21-201ENST00000384507 92 ntBASIC-1.01□□□□□ -2.57
XRCC1P18887 SNORD116-19-201ENST00000384729 92 ntBASIC-1.01□□□□□ -2.57
XRCC1P18887 MIR147A-201ENST00000385079 72 ntBASIC-1.01□□□□□ -2.57
XRCC1P18887 RNU6-887P-201ENST00000410660 100 ntBASIC-1.01□□□□□ -2.57
XRCC1P18887 RNU6-904P-201ENST00000516206 101 ntBASIC-1.01□□□□□ -2.57
XRCC1P18887 AC140658.3-201ENST00000567603 271 ntBASIC-1.01□□□□□ -2.57
XRCC1P18887 MIR382-201ENST00000637119 76 ntBASIC-1.01□□□□□ -2.57
XRCC1P18887 RNA5SP331-201ENST00000364986 107 ntBASIC-1.02□□□□□ -2.57
XRCC1P18887 RNA5SP292-201ENST00000390974 118 ntBASIC-1.02□□□□□ -2.57
XRCC1P18887 AC021146.9-201ENST00000512503 156 ntBASIC-1.02□□□□□ -2.57
XRCC1P18887 RNU5F-1-201ENST00000362507 117 ntBASIC-1.03□□□□□ -2.57
XRCC1P18887 SNORA62.4-201ENST00000365504 151 ntBASIC-1.03□□□□□ -2.57
XRCC1P18887 YWHAEP3-201ENST00000582767 121 ntBASIC-1.03□□□□□ -2.57
XRCC1P18887 MIR4306-201ENST00000583390 91 ntBASIC-1.03□□□□□ -2.57
XRCC1P18887 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.03□□□□□ -2.57
XRCC1P18887 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.03□□□□□ -2.57
XRCC1P18887 U6.96-201ENST00000636425 70 ntBASIC-1.03□□□□□ -2.57
XRCC1P18887 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.04□□□□□ -2.58
XRCC1P18887 RNU6-990P-201ENST00000364385 104 ntBASIC-1.04□□□□□ -2.58
XRCC1P18887 MIR548I1-201ENST00000408810 149 ntBASIC-1.04□□□□□ -2.58
XRCC1P18887 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.04□□□□□ -2.58
XRCC1P18887 SNORD18.2-201ENST00000459604 70 ntBASIC-1.04□□□□□ -2.58
XRCC1P18887 SNORD116-10-201ENST00000363791 102 ntBASIC-1.05□□□□□ -2.58
XRCC1P18887 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
XRCC1P18887 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.05□□□□□ -2.58
XRCC1P18887 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.06□□□□□ -2.58
XRCC1P18887 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.06□□□□□ -2.58
XRCC1P18887 RNU6-260P-201ENST00000384092 107 ntBASIC-1.06□□□□□ -2.58
XRCC1P18887 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.06□□□□□ -2.58
XRCC1P18887 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.06□□□□□ -2.58
XRCC1P18887 MIR1302-5-201ENST00000408164 150 ntBASIC-1.06□□□□□ -2.58
XRCC1P18887 MIR3165-201ENST00000579874 75 ntBASIC-1.06□□□□□ -2.58
XRCC1P18887 RNU6-226P-201ENST00000363778 107 ntBASIC-1.07□□□□□ -2.58
XRCC1P18887 RNU6-382P-201ENST00000365181 106 ntBASIC-1.07□□□□□ -2.58
XRCC1P18887 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.07□□□□□ -2.58
XRCC1P18887 MIR124-2-201ENST00000385081 109 ntBASIC-1.08□□□□□ -2.58
XRCC1P18887 MIR4464-201ENST00000580818 92 ntBASIC-1.08□□□□□ -2.58
XRCC1P18887 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.08□□□□□ -2.58
XRCC1P18887 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.09□□□□□ -2.58
XRCC1P18887 SNORD90-201ENST00000391145 111 ntBASIC-1.09□□□□□ -2.58
XRCC1P18887 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.09□□□□□ -2.58
XRCC1P18887 AC026421.1-201ENST00000519101 163 ntBASIC-1.09□□□□□ -2.58
XRCC1P18887 RNU6-208P-201ENST00000362431 107 ntBASIC-1.1□□□□□ -2.59
XRCC1P18887 RNU6-704P-201ENST00000364162 103 ntBASIC-1.1□□□□□ -2.59
XRCC1P18887 SNORD114-17-201ENST00000364699 75 ntBASIC-1.1□□□□□ -2.59
XRCC1P18887 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.1□□□□□ -2.59
XRCC1P18887 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.1□□□□□ -2.59
XRCC1P18887 MIR8485-201ENST00000401372 91 ntBASIC-1.1□□□□□ -2.59
XRCC1P18887 MIR4773-1-201ENST00000637203 78 ntBASIC-1.1□□□□□ -2.59
XRCC1P18887 SNORA19.1-201ENST00000410656 129 ntBASIC-1.11□□□□□ -2.59
XRCC1P18887 SNX3P1X-201ENST00000414887 175 ntBASIC-1.11□□□□□ -2.59
XRCC1P18887 snoU13.17-201ENST00000458802 104 ntBASIC-1.11□□□□□ -2.59
XRCC1P18887 RNU7-134P-201ENST00000458997 64 ntBASIC-1.11□□□□□ -2.59
XRCC1P18887 AC090617.8-201ENST00000623339 167 ntBASIC-1.11□□□□□ -2.59
XRCC1P18887 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.11□□□□□ -2.59
XRCC1P18887 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.12□□□□□ -2.59
XRCC1P18887 SNORA2.1-201ENST00000363089 137 ntBASIC-1.12□□□□□ -2.59
XRCC1P18887 RNU6-824P-201ENST00000363724 104 ntBASIC-1.12□□□□□ -2.59
XRCC1P18887 RNU6-209P-201ENST00000384118 107 ntBASIC-1.12□□□□□ -2.59
XRCC1P18887 MIR1236-201ENST00000408340 102 ntBASIC-1.12□□□□□ -2.59
XRCC1P18887 snoU83B.1-201ENST00000517136 88 ntBASIC-1.12□□□□□ -2.59
XRCC1P18887 RNU6-537P-201ENST00000517277 103 ntBASIC-1.12□□□□□ -2.59
XRCC1P18887 AL353803.5-201ENST00000599815 141 ntBASIC-1.12□□□□□ -2.59
XRCC1P18887 MIR6509-201ENST00000614603 85 ntBASIC-1.12□□□□□ -2.59
XRCC1P18887 MIR4796-201ENST00000580742 81 ntBASIC-1.13□□□□□ -2.59
XRCC1P18887 AL445584.3-201ENST00000617173 78 ntBASIC-1.13□□□□□ -2.59
XRCC1P18887 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.14□□□□□ -2.59
XRCC1P18887 RNU6-746P-201ENST00000384112 109 ntBASIC-1.14□□□□□ -2.59
XRCC1P18887 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.14□□□□□ -2.59
XRCC1P18887 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.14□□□□□ -2.59
XRCC1P18887 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.14□□□□□ -2.59
XRCC1P18887 AC008267.6-201ENST00000441664 139 ntBASIC-1.14□□□□□ -2.59
XRCC1P18887 AL691482.2-201ENST00000457453 84 ntBASIC-1.14□□□□□ -2.59
XRCC1P18887 MIR3133-201ENST00000583157 78 ntBASIC-1.14□□□□□ -2.59
XRCC1P18887 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.14□□□□□ -2.59
XRCC1P18887 MIR6888-201ENST00000621977 67 ntBASIC-1.14□□□□□ -2.59
XRCC1P18887 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.15□□□□□ -2.59
XRCC1P18887 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.15□□□□□ -2.59
XRCC1P18887 RNU6-706P-201ENST00000517229 104 ntBASIC-1.15□□□□□ -2.59
XRCC1P18887 U6.81-201ENST00000612550 106 ntBASIC-1.15□□□□□ -2.59
XRCC1P18887 MIR590-201ENST00000385008 97 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 297 ms