Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 MIR26B-201ENST00000362251 77 ntBASIC1.2□□□□□ -2.22
BMP4P12644 Y_RNA.74-201ENST00000362911 99 ntBASIC1.2□□□□□ -2.22
BMP4P12644 RNU6-753P-201ENST00000363926 107 ntBASIC1.2□□□□□ -2.22
BMP4P12644 SNORD116-16-201ENST00000384533 92 ntBASIC1.2□□□□□ -2.22
BMP4P12644 RNU6-980P-201ENST00000516925 103 ntBASIC1.2□□□□□ -2.22
BMP4P12644 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.2□□□□□ -2.22
BMP4P12644 RNY1P8-201ENST00000383970 114 ntBASIC1.19□□□□□ -2.22
BMP4P12644 MIR1255B2-201ENST00000408618 67 ntBASIC1.19□□□□□ -2.22
BMP4P12644 RNA5SP222-201ENST00000411039 105 ntBASIC1.19□□□□□ -2.22
BMP4P12644 RNA5SP247-201ENST00000411181 105 ntBASIC1.19□□□□□ -2.22
BMP4P12644 Y_RNA.282-201ENST00000364793 102 ntBASIC1.18□□□□□ -2.22
BMP4P12644 RNU6-392P-201ENST00000364926 101 ntBASIC1.18□□□□□ -2.22
BMP4P12644 MIR519A2-201ENST00000384990 87 ntBASIC1.18□□□□□ -2.22
BMP4P12644 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.18□□□□□ -2.22
BMP4P12644 AC244090.1-201ENST00000441884 93 ntBASIC1.18□□□□□ -2.22
BMP4P12644 MIR548AG1-201ENST00000579932 66 ntBASIC1.17□□□□□ -2.22
BMP4P12644 MIR20A-201ENST00000362279 71 ntBASIC1.16□□□□□ -2.22
BMP4P12644 RNU6-337P-201ENST00000391243 106 ntBASIC1.16□□□□□ -2.22
BMP4P12644 AC069271.1-201ENST00000445577 156 ntBASIC1.16□□□□□ -2.22
BMP4P12644 SNORA40.16-201ENST00000517238 121 ntBASIC1.16□□□□□ -2.22
BMP4P12644 AL353765.1-201ENST00000605514 183 ntBASIC1.16□□□□□ -2.22
BMP4P12644 RNA5SP517-201ENST00000364724 117 ntBASIC1.15□□□□□ -2.23
BMP4P12644 MIR499A-201ENST00000384903 122 ntBASIC1.15□□□□□ -2.23
BMP4P12644 SNORD116.2-201ENST00000391251 93 ntBASIC1.15□□□□□ -2.23
BMP4P12644 MIR5706-201ENST00000579841 80 ntBASIC1.15□□□□□ -2.23
BMP4P12644 MIR527-201ENST00000385244 85 ntBASIC1.14□□□□□ -2.23
BMP4P12644 SNORA49-201ENST00000386157 136 ntBASIC1.14□□□□□ -2.23
BMP4P12644 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
BMP4P12644 MIR1287-201ENST00000408492 90 ntBASIC1.13□□□□□ -2.23
BMP4P12644 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.13□□□□□ -2.23
BMP4P12644 Y_RNA.226-201ENST00000364337 114 ntBASIC1.12□□□□□ -2.23
BMP4P12644 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.12□□□□□ -2.23
BMP4P12644 MIR7110-201ENST00000612638 86 ntBASIC1.12□□□□□ -2.23
BMP4P12644 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
BMP4P12644 RNU6-35P-201ENST00000384530 107 ntBASIC1.11□□□□□ -2.23
BMP4P12644 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.11□□□□□ -2.23
BMP4P12644 SNORA25.18-201ENST00000607153 114 ntBASIC1.11□□□□□ -2.23
BMP4P12644 MIR6773-201ENST00000612812 74 ntBASIC1.11□□□□□ -2.23
BMP4P12644 MIR8070-201ENST00000616510 88 ntBASIC1.11□□□□□ -2.23
BMP4P12644 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
BMP4P12644 ACA64.5-201ENST00000516207 127 ntBASIC1.1□□□□□ -2.23
BMP4P12644 SNORA36.2-201ENST00000384004 127 ntBASIC1.09□□□□□ -2.23
BMP4P12644 RNU6-1232P-201ENST00000516299 86 ntBASIC1.09□□□□□ -2.23
BMP4P12644 RNU7-188P-201ENST00000517063 64 ntBASIC1.09□□□□□ -2.23
BMP4P12644 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
BMP4P12644 SNORD115-25-201ENST00000362619 82 ntBASIC1.08□□□□□ -2.24
BMP4P12644 SNORD1B-201ENST00000363091 84 ntBASIC1.08□□□□□ -2.24
BMP4P12644 RNU4-33P-201ENST00000364316 85 ntBASIC1.08□□□□□ -2.24
BMP4P12644 SNORD114-29-201ENST00000364819 70 ntBASIC1.08□□□□□ -2.24
BMP4P12644 RNU7-154P-201ENST00000516194 62 ntBASIC1.08□□□□□ -2.24
BMP4P12644 RNU6-175P-201ENST00000516896 107 ntBASIC1.08□□□□□ -2.24
BMP4P12644 MIR3660-201ENST00000584845 100 ntBASIC1.08□□□□□ -2.24
BMP4P12644 SNORD118-201ENST00000363593 134 ntBASIC1.07□□□□□ -2.24
BMP4P12644 RNU6-246P-201ENST00000384702 107 ntBASIC1.07□□□□□ -2.24
BMP4P12644 MIR140-201ENST00000385282 100 ntBASIC1.07□□□□□ -2.24
BMP4P12644 SNORD2-201ENST00000459163 69 ntBASIC1.07□□□□□ -2.24
BMP4P12644 MIR6504-201ENST00000613520 61 ntBASIC1.07□□□□□ -2.24
BMP4P12644 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.07□□□□□ -2.24
BMP4P12644 Y_RNA.109-201ENST00000363215 102 ntBASIC1.06□□□□□ -2.24
BMP4P12644 RNU6-810P-201ENST00000364001 107 ntBASIC1.06□□□□□ -2.24
BMP4P12644 SNORA40B-201ENST00000385573 128 ntBASIC1.06□□□□□ -2.24
BMP4P12644 AC087343.1-201ENST00000477341 475 ntBASIC1.06□□□□□ -2.24
BMP4P12644 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
BMP4P12644 SNORA2A-201ENST00000383885 135 ntBASIC1.05□□□□□ -2.24
BMP4P12644 RNU6-939P-201ENST00000384634 107 ntBASIC1.05□□□□□ -2.24
BMP4P12644 MIRLET7B-201ENST00000385140 83 ntBASIC1.05□□□□□ -2.24
BMP4P12644 RNU6-172P-201ENST00000411000 93 ntBASIC1.05□□□□□ -2.24
BMP4P12644 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
BMP4P12644 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
BMP4P12644 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
BMP4P12644 MIR548X-201ENST00000580069 75 ntBASIC1.04□□□□□ -2.24
BMP4P12644 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.24
BMP4P12644 Y_RNA.423-201ENST00000384057 113 ntBASIC1.03□□□□□ -2.24
BMP4P12644 RNU6-229P-201ENST00000516614 102 ntBASIC1.03□□□□□ -2.24
BMP4P12644 MIR4677-201ENST00000584153 80 ntBASIC1.03□□□□□ -2.24
BMP4P12644 U7.6-201ENST00000610841 64 ntBASIC1.03□□□□□ -2.24
BMP4P12644 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.03□□□□□ -2.24
BMP4P12644 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
BMP4P12644 RNU6-502P-201ENST00000362419 108 ntBASIC1.02□□□□□ -2.25
BMP4P12644 Y_RNA.224-201ENST00000364308 111 ntBASIC1.02□□□□□ -2.25
BMP4P12644 MIR501-201ENST00000390204 84 ntBASIC1.02□□□□□ -2.25
BMP4P12644 MIR1276-201ENST00000408707 83 ntBASIC1.02□□□□□ -2.25
BMP4P12644 SNORA40.8-201ENST00000411034 126 ntBASIC1.02□□□□□ -2.25
BMP4P12644 RNU4-54P-201ENST00000516428 129 ntBASIC1.02□□□□□ -2.25
BMP4P12644 RNA5SP470-201ENST00000516463 106 ntBASIC1.02□□□□□ -2.25
BMP4P12644 RNU6-930P-201ENST00000390938 100 ntBASIC1.01□□□□□ -2.25
BMP4P12644 RNA5SP102-201ENST00000516865 106 ntBASIC1.01□□□□□ -2.25
BMP4P12644 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
BMP4P12644 MIR6755-201ENST00000619993 66 ntBASIC1.01□□□□□ -2.25
BMP4P12644 RNU6-1036P-201ENST00000383959 104 ntBASIC1□□□□□ -2.25
BMP4P12644 RNU6-458P-201ENST00000384179 107 ntBASIC1□□□□□ -2.25
BMP4P12644 RNU6-782P-201ENST00000516852 104 ntBASIC1□□□□□ -2.25
BMP4P12644 MIR4490-201ENST00000582647 84 ntBASIC1□□□□□ -2.25
BMP4P12644 MIR4661-201ENST00000582720 75 ntBASIC1□□□□□ -2.25
BMP4P12644 MIR4452-201ENST00000583004 71 ntBASIC1□□□□□ -2.25
BMP4P12644 U6.58-201ENST00000613107 107 ntBASIC1□□□□□ -2.25
BMP4P12644 MIR548F3-201ENST00000408509 87 ntBASIC0.98□□□□□ -2.25
BMP4P12644 RNA5SP220-201ENST00000516298 104 ntBASIC0.98□□□□□ -2.25
BMP4P12644 MIR608-201ENST00000384820 100 ntBASIC0.97□□□□□ -2.25
BMP4P12644 OR2A41P-201ENST00000473586 105 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 222.5 ms