Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNU6-158P-201ENST00000517104 100 ntBASIC-3.2□□□□□ -2.92
TPM1P09493 MIR4679-2-201ENST00000578358 77 ntBASIC-3.2□□□□□ -2.92
TPM1P09493 Y_RNA.240-201ENST00000364469 95 ntBASIC-3.21□□□□□ -2.92
TPM1P09493 Y_RNA.272-201ENST00000364696 102 ntBASIC-3.21□□□□□ -2.92
TPM1P09493 SNORD58C-201ENST00000365223 64 ntBASIC-3.21□□□□□ -2.92
TPM1P09493 RNU6-246P-201ENST00000384702 107 ntBASIC-3.21□□□□□ -2.92
TPM1P09493 Y_RNA.563-201ENST00000384707 108 ntBASIC-3.21□□□□□ -2.92
TPM1P09493 RNU6-111P-201ENST00000517179 105 ntBASIC-3.21□□□□□ -2.92
TPM1P09493 Y_RNA.778-201ENST00000620203 90 ntBASIC-3.21□□□□□ -2.92
TPM1P09493 U7.2-201ENST00000607576 63 ntBASIC-3.22□□□□□ -2.92
TPM1P09493 MIR3128-201ENST00000581957 66 ntBASIC-3.23□□□□□ -2.93
TPM1P09493 AL035470.1-201ENST00000622571 220 ntBASIC-3.23□□□□□ -2.93
TPM1P09493 MIR198-201ENST00000637333 62 ntBASIC-3.23□□□□□ -2.93
TPM1P09493 Y_RNA.223-201ENST00000364290 113 ntBASIC-3.24□□□□□ -2.93
TPM1P09493 MIR548AG1-201ENST00000579932 66 ntBASIC-3.24□□□□□ -2.93
TPM1P09493 Y_RNA.47-201ENST00000362697 108 ntBASIC-3.25□□□□□ -2.93
TPM1P09493 Y_RNA.426-201ENST00000384068 113 ntBASIC-3.25□□□□□ -2.93
TPM1P09493 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.25□□□□□ -2.93
TPM1P09493 RNU6-540P-201ENST00000384622 101 ntBASIC-3.25□□□□□ -2.93
TPM1P09493 MIR487B-201ENST00000385021 84 ntBASIC-3.25□□□□□ -2.93
TPM1P09493 MTCYBP6-201ENST00000441810 138 ntBASIC-3.25□□□□□ -2.93
TPM1P09493 RNU6-752P-201ENST00000516376 102 ntBASIC-3.25□□□□□ -2.93
TPM1P09493 RNU6-1061P-201ENST00000516530 99 ntBASIC-3.25□□□□□ -2.93
TPM1P09493 RNU6-79P-201ENST00000362511 107 ntBASIC-3.26□□□□□ -2.93
TPM1P09493 Y_RNA.144-201ENST00000363521 113 ntBASIC-3.26□□□□□ -2.93
TPM1P09493 SNX3P1X-201ENST00000414887 175 ntBASIC-3.26□□□□□ -2.93
TPM1P09493 Y_RNA.340-201ENST00000365330 92 ntBASIC-3.27□□□□□ -2.93
TPM1P09493 Y_RNA.346-201ENST00000365385 112 ntBASIC-3.27□□□□□ -2.93
TPM1P09493 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.27□□□□□ -2.93
TPM1P09493 RNU6-1023P-201ENST00000516137 106 ntBASIC-3.27□□□□□ -2.93
TPM1P09493 RNU6-1174P-201ENST00000517278 101 ntBASIC-3.27□□□□□ -2.93
TPM1P09493 Y_RNA.603-201ENST00000410571 108 ntBASIC-3.28□□□□□ -2.93
TPM1P09493 Y_RNA.11-201ENST00000362375 109 ntBASIC-3.29□□□□□ -2.94
TPM1P09493 Y_RNA.422-201ENST00000384054 114 ntBASIC-3.29□□□□□ -2.94
TPM1P09493 MIR548Q-201ENST00000408404 100 ntBASIC-3.29□□□□□ -2.94
TPM1P09493 Y_RNA.606-201ENST00000410579 103 ntBASIC-3.29□□□□□ -2.94
TPM1P09493 AL117187.1-201ENST00000555482 181 ntBASIC-3.29□□□□□ -2.94
TPM1P09493 Y_RNA.10-201ENST00000362371 110 ntBASIC-3.3□□□□□ -2.94
TPM1P09493 Y_RNA.149-201ENST00000363558 117 ntBASIC-3.3□□□□□ -2.94
TPM1P09493 SNORA20.1-201ENST00000364790 130 ntBASIC-3.3□□□□□ -2.94
TPM1P09493 AL118496.2-201ENST00000448300 230 ntBASIC-3.3□□□□□ -2.94
TPM1P09493 RNU6-983P-201ENST00000516004 103 ntBASIC-3.3□□□□□ -2.94
TPM1P09493 MIR4441-201ENST00000582623 100 ntBASIC-3.3□□□□□ -2.94
TPM1P09493 MIR4777-201ENST00000583710 86 ntBASIC-3.3□□□□□ -2.94
TPM1P09493 MIR365A-201ENST00000362260 87 ntBASIC-3.31□□□□□ -2.94
TPM1P09493 RNU6-1113P-201ENST00000384348 107 ntBASIC-3.31□□□□□ -2.94
TPM1P09493 Y_RNA.668-201ENST00000516233 93 ntBASIC-3.31□□□□□ -2.94
TPM1P09493 Y_RNA.29-201ENST00000362570 113 ntBASIC-3.32□□□□□ -2.94
TPM1P09493 Y_RNA.175-201ENST00000363794 111 ntBASIC-3.32□□□□□ -2.94
TPM1P09493 Y_RNA.680-201ENST00000516441 93 ntBASIC-3.32□□□□□ -2.94
TPM1P09493 Y_RNA.644-201ENST00000459006 113 ntBASIC-3.33□□□□□ -2.94
TPM1P09493 Y_RNA.674-201ENST00000516362 113 ntBASIC-3.33□□□□□ -2.94
TPM1P09493 MIR4796-201ENST00000580742 81 ntBASIC-3.33□□□□□ -2.94
TPM1P09493 Y_RNA.103-201ENST00000363171 102 ntBASIC-3.34□□□□□ -2.94
TPM1P09493 RNU6-807P-201ENST00000516805 107 ntBASIC-3.34□□□□□ -2.94
TPM1P09493 MIR601-201ENST00000385256 79 ntBASIC-3.35□□□□□ -2.95
TPM1P09493 Y_RNA.662-201ENST00000516028 97 ntBASIC-3.35□□□□□ -2.95
TPM1P09493 MIR5009-201ENST00000578736 100 ntBASIC-3.35□□□□□ -2.95
TPM1P09493 MIR548X2-201ENST00000579776 100 ntBASIC-3.35□□□□□ -2.95
TPM1P09493 AC044792.1-201ENST00000593294 196 ntBASIC-3.35□□□□□ -2.95
TPM1P09493 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.37□□□□□ -2.95
TPM1P09493 Y_RNA.502-201ENST00000384478 113 ntBASIC-3.37□□□□□ -2.95
TPM1P09493 Y_RNA.543-201ENST00000384649 107 ntBASIC-3.37□□□□□ -2.95
TPM1P09493 RNA5SP272-201ENST00000516095 111 ntBASIC-3.37□□□□□ -2.95
TPM1P09493 RNU6-228P-201ENST00000362700 106 ntBASIC-3.38□□□□□ -2.95
TPM1P09493 U2.7-201ENST00000619197 100 ntBASIC-3.38□□□□□ -2.95
TPM1P09493 RNU6-478P-201ENST00000363904 110 ntBASIC-3.39□□□□□ -2.95
TPM1P09493 AC108019.1-201ENST00000512540 175 ntBASIC-3.39□□□□□ -2.95
TPM1P09493 RNU6-795P-201ENST00000516323 103 ntBASIC-3.39□□□□□ -2.95
TPM1P09493 SNORD58A-201ENST00000383875 65 ntBASIC-3.4□□□□□ -2.95
TPM1P09493 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.4□□□□□ -2.95
TPM1P09493 RNU6-861P-201ENST00000516745 106 ntBASIC-3.4□□□□□ -2.95
TPM1P09493 RNU6-656P-201ENST00000516785 107 ntBASIC-3.4□□□□□ -2.95
TPM1P09493 AC062037.2-201ENST00000610137 73 ntBASIC-3.4□□□□□ -2.95
TPM1P09493 RNA5SP331-201ENST00000364986 107 ntBASIC-3.41□□□□□ -2.96
TPM1P09493 RNU6-695P-201ENST00000391157 104 ntBASIC-3.41□□□□□ -2.96
TPM1P09493 Y_RNA.705-201ENST00000516862 110 ntBASIC-3.41□□□□□ -2.96
TPM1P09493 MIR4801-201ENST00000582704 82 ntBASIC-3.41□□□□□ -2.96
TPM1P09493 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-3.41□□□□□ -2.96
TPM1P09493 AC012531.4-201ENST00000616509 177 ntBASIC-3.41□□□□□ -2.96
TPM1P09493 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.42□□□□□ -2.96
TPM1P09493 Y_RNA.488-201ENST00000384403 102 ntBASIC-3.42□□□□□ -2.96
TPM1P09493 RNU6-1160P-201ENST00000384546 104 ntBASIC-3.42□□□□□ -2.96
TPM1P09493 RNU6-972P-201ENST00000391208 107 ntBASIC-3.42□□□□□ -2.96
TPM1P09493 Y_RNA.630-201ENST00000411370 108 ntBASIC-3.42□□□□□ -2.96
TPM1P09493 AL450471.1-201ENST00000447509 127 ntBASIC-3.42□□□□□ -2.96
TPM1P09493 RNU6-608P-201ENST00000383927 104 ntBASIC-3.43□□□□□ -2.96
TPM1P09493 Y_RNA.61-201ENST00000362835 102 ntBASIC-3.44□□□□□ -2.96
TPM1P09493 RNU6-681P-201ENST00000364012 104 ntBASIC-3.44□□□□□ -2.96
TPM1P09493 SNORD116-18-201ENST00000383961 92 ntBASIC-3.44□□□□□ -2.96
TPM1P09493 Y_RNA.616-201ENST00000410835 95 ntBASIC-3.44□□□□□ -2.96
TPM1P09493 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.45□□□□□ -2.96
TPM1P09493 Y_RNA.701-201ENST00000516812 110 ntBASIC-3.45□□□□□ -2.96
TPM1P09493 RNU6-340P-201ENST00000364005 107 ntBASIC-3.46□□□□□ -2.96
TPM1P09493 Y_RNA.236-201ENST00000364427 111 ntBASIC-3.46□□□□□ -2.96
TPM1P09493 MIR1236-201ENST00000408340 102 ntBASIC-3.46□□□□□ -2.96
TPM1P09493 RNU6-887P-201ENST00000410660 100 ntBASIC-3.47□□□□□ -2.96
TPM1P09493 RNU7-120P-201ENST00000459334 63 ntBASIC-3.47□□□□□ -2.96
TPM1P09493 RNU6-772P-201ENST00000516042 105 ntBASIC-3.47□□□□□ -2.96
TPM1P09493 RNU6-682P-201ENST00000363843 106 ntBASIC-3.48□□□□□ -2.97
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms