Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 snoU13.13-201ENST00000458842 104 ntBASIC0.32□□□□□ -2.36
APPP05067 SCARNA11.2-201ENST00000517183 154 ntBASIC0.32□□□□□ -2.36
APPP05067 AC023932.2-201ENST00000603176 175 ntBASIC0.32□□□□□ -2.36
APPP05067 AC084368.1-201ENST00000620935 65 ntBASIC0.32□□□□□ -2.36
APPP05067 RNU6-175P-201ENST00000516896 107 ntBASIC0.31□□□□□ -2.36
APPP05067 YWHAEP3-201ENST00000582767 121 ntBASIC0.31□□□□□ -2.36
APPP05067 U7.6-201ENST00000610841 64 ntBASIC0.31□□□□□ -2.36
APPP05067 Y_RNA.606-201ENST00000410579 103 ntBASIC0.3□□□□□ -2.36
APPP05067 SCARNA17.3-201ENST00000516381 125 ntBASIC0.3□□□□□ -2.36
APPP05067 RNA5SP147-201ENST00000516493 109 ntBASIC0.3□□□□□ -2.36
APPP05067 Y_RNA.788-201ENST00000622394 112 ntBASIC0.3□□□□□ -2.36
APPP05067 Y_RNA.68-201ENST00000362881 102 ntBASIC0.29□□□□□ -2.36
APPP05067 RNU6-1039P-201ENST00000383931 107 ntBASIC0.29□□□□□ -2.36
APPP05067 RNA5SP63-201ENST00000391225 112 ntBASIC0.29□□□□□ -2.36
APPP05067 MIR548E-201ENST00000408287 88 ntBASIC0.29□□□□□ -2.36
APPP05067 RNU7-24P-201ENST00000458867 62 ntBASIC0.29□□□□□ -2.36
APPP05067 MIR664A-201ENST00000626086 82 ntBASIC0.29□□□□□ -2.36
APPP05067 SCARNA18B-201ENST00000458806 135 ntBASIC0.28□□□□□ -2.36
APPP05067 MIR5093-201ENST00000583199 100 ntBASIC0.28□□□□□ -2.36
APPP05067 AC104408.1-201ENST00000605241 170 ntBASIC0.28□□□□□ -2.36
APPP05067 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
APPP05067 MIR6509-201ENST00000614603 85 ntBASIC0.28□□□□□ -2.36
APPP05067 MIR593-201ENST00000384856 100 ntBASIC0.27□□□□□ -2.37
APPP05067 AL691482.2-201ENST00000457453 84 ntBASIC0.27□□□□□ -2.37
APPP05067 RNU6-274P-201ENST00000459566 107 ntBASIC0.27□□□□□ -2.37
APPP05067 Y_RNA.264-201ENST00000364665 102 ntBASIC0.26□□□□□ -2.37
APPP05067 SNORD78.1-201ENST00000390866 65 ntBASIC0.26□□□□□ -2.37
APPP05067 SNORD114-5-201ENST00000362928 70 ntBASIC0.25□□□□□ -2.37
APPP05067 Y_RNA.660-201ENST00000516002 120 ntBASIC0.25□□□□□ -2.37
APPP05067 RNU6-782P-201ENST00000516852 104 ntBASIC0.25□□□□□ -2.37
APPP05067 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.25□□□□□ -2.37
APPP05067 RNU6-315P-201ENST00000362666 107 ntBASIC0.24□□□□□ -2.37
APPP05067 SNORA49-201ENST00000386157 136 ntBASIC0.24□□□□□ -2.37
APPP05067 MIR876-201ENST00000401147 81 ntBASIC0.24□□□□□ -2.37
APPP05067 MIR3657-201ENST00000584818 117 ntBASIC0.24□□□□□ -2.37
APPP05067 MIR6718-201ENST00000616153 80 ntBASIC0.24□□□□□ -2.37
APPP05067 MIR4315-1-201ENST00000636800 73 ntBASIC0.24□□□□□ -2.37
APPP05067 MIR4315-2-201ENST00000640925 73 ntBASIC0.24□□□□□ -2.37
APPP05067 RNA5SP214-201ENST00000363378 118 ntBASIC0.23□□□□□ -2.37
APPP05067 MIR1295A-201ENST00000408463 79 ntBASIC0.23□□□□□ -2.37
APPP05067 AC074348.1-201ENST00000426503 132 ntBASIC0.23□□□□□ -2.37
APPP05067 RNU6-303P-201ENST00000517091 106 ntBASIC0.23□□□□□ -2.37
APPP05067 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
APPP05067 RNU6-1036P-201ENST00000383959 104 ntBASIC0.22□□□□□ -2.37
APPP05067 RNU6-260P-201ENST00000384092 107 ntBASIC0.22□□□□□ -2.37
APPP05067 MIR3202-2-201ENST00000635980 79 ntBASIC0.22□□□□□ -2.37
APPP05067 Y_RNA.178-201ENST00000363832 102 ntBASIC0.21□□□□□ -2.38
APPP05067 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.21□□□□□ -2.38
APPP05067 RNA5SP163-201ENST00000410304 99 ntBASIC0.21□□□□□ -2.38
APPP05067 Y_RNA.433-201ENST00000384089 102 ntBASIC0.2□□□□□ -2.38
APPP05067 SNORA8.1-201ENST00000384250 140 ntBASIC0.2□□□□□ -2.38
APPP05067 SNORA72.7-201ENST00000516349 94 ntBASIC0.2□□□□□ -2.38
APPP05067 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.19□□□□□ -2.38
APPP05067 SNORD114-9-201ENST00000364370 72 ntBASIC0.19□□□□□ -2.38
APPP05067 SNORD114-29-201ENST00000364819 70 ntBASIC0.19□□□□□ -2.38
APPP05067 MIR145-201ENST00000384967 88 ntBASIC0.19□□□□□ -2.38
APPP05067 MIR6514-201ENST00000622549 70 ntBASIC0.19□□□□□ -2.38
APPP05067 MIR20A-201ENST00000362279 71 ntBASIC0.18□□□□□ -2.38
APPP05067 SNORA42.1-201ENST00000363515 137 ntBASIC0.18□□□□□ -2.38
APPP05067 RNU6-857P-201ENST00000515893 110 ntBASIC0.18□□□□□ -2.38
APPP05067 SNORD114-4-201ENST00000363962 75 ntBASIC0.17□□□□□ -2.38
APPP05067 MIR889-201ENST00000401280 79 ntBASIC0.17□□□□□ -2.38
APPP05067 RNU6-681P-201ENST00000364012 104 ntBASIC0.16□□□□□ -2.38
APPP05067 SNORA75.1-201ENST00000391130 148 ntBASIC0.16□□□□□ -2.38
APPP05067 RNA5SP299-201ENST00000391203 116 ntBASIC0.16□□□□□ -2.38
APPP05067 AC021146.9-201ENST00000512503 156 ntBASIC0.16□□□□□ -2.38
APPP05067 RNA5SP395-201ENST00000516567 118 ntBASIC0.16□□□□□ -2.38
APPP05067 AC145423.2-201ENST00000610631 239 ntBASIC0.16□□□□□ -2.38
APPP05067 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.16□□□□□ -2.38
APPP05067 RNU6-1094P-201ENST00000362416 104 ntBASIC0.15□□□□□ -2.39
APPP05067 AC244090.1-201ENST00000441884 93 ntBASIC0.15□□□□□ -2.39
APPP05067 MIR3134-201ENST00000579433 74 ntBASIC0.15□□□□□ -2.39
APPP05067 MIR5190-201ENST00000581537 80 ntBASIC0.14□□□□□ -2.39
APPP05067 SNORA63.6-201ENST00000364921 119 ntBASIC0.13□□□□□ -2.39
APPP05067 MIR3675-201ENST00000583661 73 ntBASIC0.13□□□□□ -2.39
APPP05067 AC090617.8-201ENST00000623339 167 ntBASIC0.13□□□□□ -2.39
APPP05067 MIR610-201ENST00000385139 96 ntBASIC0.12□□□□□ -2.39
APPP05067 RNU6-279P-201ENST00000391297 101 ntBASIC0.12□□□□□ -2.39
APPP05067 RNA5SP285-201ENST00000516619 119 ntBASIC0.12□□□□□ -2.39
APPP05067 MIR4743-201ENST00000584576 69 ntBASIC0.12□□□□□ -2.39
APPP05067 RNU6-929P-201ENST00000384429 107 ntBASIC0.11□□□□□ -2.39
APPP05067 RNU6-604P-201ENST00000390917 100 ntBASIC0.11□□□□□ -2.39
APPP05067 RNU6-1275P-201ENST00000391087 107 ntBASIC0.11□□□□□ -2.39
APPP05067 MIR892B-201ENST00000401279 77 ntBASIC0.11□□□□□ -2.39
APPP05067 SNORA2.1-201ENST00000363089 137 ntBASIC0.1□□□□□ -2.39
APPP05067 RNU6-752P-201ENST00000516376 102 ntBASIC0.1□□□□□ -2.39
APPP05067 RNU6-180P-201ENST00000516697 61 ntBASIC0.1□□□□□ -2.39
APPP05067 RNU6-807P-201ENST00000516805 107 ntBASIC0.1□□□□□ -2.39
APPP05067 AP000676.1-201ENST00000533307 52 ntBASIC0.1□□□□□ -2.39
APPP05067 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.1□□□□□ -2.39
APPP05067 SNORD45.1-201ENST00000363181 77 ntBASIC0.09□□□□□ -2.4
APPP05067 SNORA33.1-201ENST00000364957 130 ntBASIC0.09□□□□□ -2.4
APPP05067 Y_RNA.633-201ENST00000459107 95 ntBASIC0.09□□□□□ -2.4
APPP05067 RNU6-982P-201ENST00000516216 102 ntBASIC0.08□□□□□ -2.4
APPP05067 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
APPP05067 MIR6507-201ENST00000613630 70 ntBASIC0.07□□□□□ -2.4
APPP05067 MIR1297-201ENST00000637311 77 ntBASIC0.07□□□□□ -2.4
APPP05067 MIR329-2-201ENST00000385029 84 ntBASIC0.06□□□□□ -2.4
APPP05067 RNU6-380P-201ENST00000410207 107 ntBASIC0.06□□□□□ -2.4
APPP05067 RNU6-70P-201ENST00000516438 60 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 219.7 ms