Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SCARNA18B-201ENST00000458806 135 ntBASIC-0.85□□□□□ -2.55
CD74P04233 RNU7-24P-201ENST00000458867 62 ntBASIC-0.85□□□□□ -2.55
CD74P04233 SNORD18.2-201ENST00000459604 70 ntBASIC-0.85□□□□□ -2.55
CD74P04233 SCARNA23-201ENST00000516060 130 ntBASIC-0.85□□□□□ -2.55
CD74P04233 RNA5SP147-201ENST00000516493 109 ntBASIC-0.85□□□□□ -2.55
CD74P04233 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.85□□□□□ -2.55
CD74P04233 SNORD114-17-201ENST00000364699 75 ntBASIC-0.86□□□□□ -2.55
CD74P04233 SNORD58A-201ENST00000383875 65 ntBASIC-0.86□□□□□ -2.55
CD74P04233 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.86□□□□□ -2.55
CD74P04233 RNU6-24P-201ENST00000384440 107 ntBASIC-0.86□□□□□ -2.55
CD74P04233 MIR203A-201ENST00000384836 110 ntBASIC-0.86□□□□□ -2.55
CD74P04233 snosnR66.1-201ENST00000391095 99 ntBASIC-0.86□□□□□ -2.55
CD74P04233 RNU6-972P-201ENST00000391208 107 ntBASIC-0.86□□□□□ -2.55
CD74P04233 RNU6-274P-201ENST00000459566 107 ntBASIC-0.86□□□□□ -2.55
CD74P04233 AC026421.1-201ENST00000519101 163 ntBASIC-0.86□□□□□ -2.55
CD74P04233 AC006254.2-201ENST00000603259 279 ntBASIC-0.86□□□□□ -2.55
CD74P04233 RNU6-208P-201ENST00000362431 107 ntBASIC-0.87□□□□□ -2.55
CD74P04233 RNU5F-1-201ENST00000362507 117 ntBASIC-0.87□□□□□ -2.55
CD74P04233 SNORD74.6-201ENST00000364796 70 ntBASIC-0.87□□□□□ -2.55
CD74P04233 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.87□□□□□ -2.55
CD74P04233 SNORD116-21-201ENST00000384507 92 ntBASIC-0.87□□□□□ -2.55
CD74P04233 RNU6-880P-201ENST00000384526 107 ntBASIC-0.87□□□□□ -2.55
CD74P04233 RNU6-412P-201ENST00000516434 106 ntBASIC-0.87□□□□□ -2.55
CD74P04233 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.87□□□□□ -2.55
CD74P04233 RNU6-260P-201ENST00000384092 107 ntBASIC-0.88□□□□□ -2.55
CD74P04233 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.88□□□□□ -2.55
CD74P04233 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.88□□□□□ -2.55
CD74P04233 RNU6-887P-201ENST00000410660 100 ntBASIC-0.88□□□□□ -2.55
CD74P04233 RNU7-134P-201ENST00000458997 64 ntBASIC-0.88□□□□□ -2.55
CD74P04233 AC140658.3-201ENST00000567603 271 ntBASIC-0.88□□□□□ -2.55
CD74P04233 MIR378F-201ENST00000578143 78 ntBASIC-0.88□□□□□ -2.55
CD74P04233 MIR6738-201ENST00000619620 64 ntBASIC-0.88□□□□□ -2.55
CD74P04233 MIR6888-201ENST00000621977 67 ntBASIC-0.88□□□□□ -2.55
CD74P04233 RNU6-824P-201ENST00000363724 104 ntBASIC-0.89□□□□□ -2.55
CD74P04233 snoU13.17-201ENST00000458802 104 ntBASIC-0.89□□□□□ -2.55
CD74P04233 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.89□□□□□ -2.55
CD74P04233 RNA5SP470-201ENST00000516463 106 ntBASIC-0.89□□□□□ -2.55
CD74P04233 YWHAEP3-201ENST00000582767 121 ntBASIC-0.89□□□□□ -2.55
CD74P04233 MIR6509-201ENST00000614603 85 ntBASIC-0.89□□□□□ -2.55
CD74P04233 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.9□□□□□ -2.55
CD74P04233 MIR587-201ENST00000384845 96 ntBASIC-0.9□□□□□ -2.55
CD74P04233 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.9□□□□□ -2.55
CD74P04233 SNX3P1X-201ENST00000414887 175 ntBASIC-0.9□□□□□ -2.55
CD74P04233 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.9□□□□□ -2.55
CD74P04233 RNU6-904P-201ENST00000516206 101 ntBASIC-0.9□□□□□ -2.55
CD74P04233 SNORA62.4-201ENST00000365504 151 ntBASIC-0.91□□□□□ -2.56
CD74P04233 SNORD116-14-201ENST00000383894 92 ntBASIC-0.91□□□□□ -2.56
CD74P04233 SNORD116-17-201ENST00000383929 92 ntBASIC-0.91□□□□□ -2.56
CD74P04233 SNORD116-15-201ENST00000384445 92 ntBASIC-0.91□□□□□ -2.56
CD74P04233 SNORD116-19-201ENST00000384729 92 ntBASIC-0.91□□□□□ -2.56
CD74P04233 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.91□□□□□ -2.56
CD74P04233 AL691482.2-201ENST00000457453 84 ntBASIC-0.91□□□□□ -2.56
CD74P04233 RNU6-794P-201ENST00000517261 64 ntBASIC-0.91□□□□□ -2.56
CD74P04233 MIR4306-201ENST00000583390 91 ntBASIC-0.91□□□□□ -2.56
CD74P04233 MIR4324-201ENST00000584846 72 ntBASIC-0.91□□□□□ -2.56
CD74P04233 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.92□□□□□ -2.56
CD74P04233 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.92□□□□□ -2.56
CD74P04233 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.92□□□□□ -2.56
CD74P04233 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.92□□□□□ -2.56
CD74P04233 AL353803.5-201ENST00000599815 141 ntBASIC-0.92□□□□□ -2.56
CD74P04233 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.92□□□□□ -2.56
CD74P04233 SNORA33.1-201ENST00000364957 130 ntBASIC-0.93□□□□□ -2.56
CD74P04233 MIR590-201ENST00000385008 97 ntBASIC-0.93□□□□□ -2.56
CD74P04233 RNU2-51P-201ENST00000410708 197 ntBASIC-0.93□□□□□ -2.56
CD74P04233 RNU7-61P-201ENST00000515897 61 ntBASIC-0.93□□□□□ -2.56
CD74P04233 RNU6-162P-201ENST00000516228 103 ntBASIC-0.93□□□□□ -2.56
CD74P04233 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.93□□□□□ -2.56
CD74P04233 MIR4796-201ENST00000580742 81 ntBASIC-0.93□□□□□ -2.56
CD74P04233 AL445584.3-201ENST00000617173 78 ntBASIC-0.93□□□□□ -2.56
CD74P04233 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.94□□□□□ -2.56
CD74P04233 SNORD116-10-201ENST00000363791 102 ntBASIC-0.94□□□□□ -2.56
CD74P04233 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.94□□□□□ -2.56
CD74P04233 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.94□□□□□ -2.56
CD74P04233 RNU6-746P-201ENST00000384112 109 ntBASIC-0.94□□□□□ -2.56
CD74P04233 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.94□□□□□ -2.56
CD74P04233 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.94□□□□□ -2.56
CD74P04233 MIR1302-5-201ENST00000408164 150 ntBASIC-0.94□□□□□ -2.56
CD74P04233 MIR3657-201ENST00000584818 117 ntBASIC-0.94□□□□□ -2.56
CD74P04233 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.94□□□□□ -2.56
CD74P04233 RNU6-774P-201ENST00000363238 107 ntBASIC-0.95□□□□□ -2.56
CD74P04233 MIR1255B2-201ENST00000408618 67 ntBASIC-0.95□□□□□ -2.56
CD74P04233 MIR3133-201ENST00000583157 78 ntBASIC-0.95□□□□□ -2.56
CD74P04233 SNORA2.1-201ENST00000363089 137 ntBASIC-0.96□□□□□ -2.56
CD74P04233 RNU6-10P-201ENST00000384036 107 ntBASIC-0.96□□□□□ -2.56
CD74P04233 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.96□□□□□ -2.56
CD74P04233 RNU6-109P-201ENST00000516364 107 ntBASIC-0.96□□□□□ -2.56
CD74P04233 RNU6-184P-201ENST00000516514 107 ntBASIC-0.96□□□□□ -2.56
CD74P04233 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.97□□□□□ -2.56
CD74P04233 MIR8485-201ENST00000401372 91 ntBASIC-0.97□□□□□ -2.56
CD74P04233 AL078595.1-201ENST00000404458 226 ntBASIC-0.97□□□□□ -2.56
CD74P04233 MIR1236-201ENST00000408340 102 ntBASIC-0.97□□□□□ -2.56
CD74P04233 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.98□□□□□ -2.57
CD74P04233 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.98□□□□□ -2.57
CD74P04233 RNA5SP192-201ENST00000364404 120 ntBASIC-0.98□□□□□ -2.57
CD74P04233 SNORD63.1-201ENST00000516178 80 ntBASIC-0.98□□□□□ -2.57
CD74P04233 RNU7-153P-201ENST00000516455 62 ntBASIC-0.98□□□□□ -2.57
CD74P04233 RNU6-537P-201ENST00000517277 103 ntBASIC-0.98□□□□□ -2.57
CD74P04233 CYP3A54P-201ENST00000566950 75 ntBASIC-0.98□□□□□ -2.57
CD74P04233 U6.81-201ENST00000612550 106 ntBASIC-0.98□□□□□ -2.57
CD74P04233 SNORD115-22-201ENST00000364456 82 ntBASIC-0.99□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 212 ms