Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RNU6-698P-201ENST00000363523 107 ntBASIC1.33□□□□□ -2.2
PTCD1O75127 RNU6-34P-201ENST00000364874 107 ntBASIC1.33□□□□□ -2.2
PTCD1O75127 SNORD113-2-201ENST00000391082 72 ntBASIC1.33□□□□□ -2.2
PTCD1O75127 RNU6-808P-201ENST00000391233 108 ntBASIC1.33□□□□□ -2.2
PTCD1O75127 SCARNA16.5-201ENST00000517114 183 ntBASIC1.33□□□□□ -2.2
PTCD1O75127 SNORA36.1-201ENST00000363424 132 ntBASIC1.32□□□□□ -2.2
PTCD1O75127 Y_RNA.250-201ENST00000364542 110 ntBASIC1.32□□□□□ -2.2
PTCD1O75127 MIR517B-201ENST00000385102 67 ntBASIC1.32□□□□□ -2.2
PTCD1O75127 MIR548E-201ENST00000408287 88 ntBASIC1.32□□□□□ -2.2
PTCD1O75127 RNU4-88P-201ENST00000411220 86 ntBASIC1.32□□□□□ -2.2
PTCD1O75127 MIR3973-201ENST00000579824 107 ntBASIC1.32□□□□□ -2.2
PTCD1O75127 AC090617.8-201ENST00000623339 167 ntBASIC1.32□□□□□ -2.2
PTCD1O75127 MIR18A-201ENST00000362310 71 ntBASIC1.31□□□□□ -2.2
PTCD1O75127 Y_RNA.325-201ENST00000365171 122 ntBASIC1.31□□□□□ -2.2
PTCD1O75127 MIR598-201ENST00000384868 97 ntBASIC1.31□□□□□ -2.2
PTCD1O75127 RNA5SP222-201ENST00000411039 105 ntBASIC1.31□□□□□ -2.2
PTCD1O75127 MIR4473-201ENST00000583731 91 ntBASIC1.31□□□□□ -2.2
PTCD1O75127 RNU4-38P-201ENST00000364472 129 ntBASIC1.29□□□□□ -2.2
PTCD1O75127 SCARNA17.3-201ENST00000516381 125 ntBASIC1.29□□□□□ -2.2
PTCD1O75127 AC211469.2-201ENST00000605461 205 ntBASIC1.29□□□□□ -2.2
PTCD1O75127 MIR6828-201ENST00000636181 60 ntBASIC1.29□□□□□ -2.2
PTCD1O75127 SNORA9.1-201ENST00000362412 131 ntBASIC1.28□□□□□ -2.2
PTCD1O75127 SNORD114-4-201ENST00000363962 75 ntBASIC1.28□□□□□ -2.2
PTCD1O75127 MIR4661-201ENST00000582720 75 ntBASIC1.28□□□□□ -2.2
PTCD1O75127 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.28□□□□□ -2.2
PTCD1O75127 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
PTCD1O75127 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
PTCD1O75127 SNORD114-26-201ENST00000363543 72 ntBASIC1.27□□□□□ -2.21
PTCD1O75127 SNORA63.6-201ENST00000364921 119 ntBASIC1.27□□□□□ -2.21
PTCD1O75127 MIR1285-1-201ENST00000408593 84 ntBASIC1.27□□□□□ -2.21
PTCD1O75127 MIR5000-201ENST00000577717 103 ntBASIC1.27□□□□□ -2.21
PTCD1O75127 AL353765.1-201ENST00000605514 183 ntBASIC1.27□□□□□ -2.21
PTCD1O75127 SNORA70.25-201ENST00000612741 95 ntBASIC1.27□□□□□ -2.21
PTCD1O75127 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.26□□□□□ -2.21
PTCD1O75127 MIR4752-201ENST00000579672 72 ntBASIC1.26□□□□□ -2.21
PTCD1O75127 MIR6779-201ENST00000617283 64 ntBASIC1.26□□□□□ -2.21
PTCD1O75127 Y_RNA.407-201ENST00000383986 113 ntBASIC1.25□□□□□ -2.21
PTCD1O75127 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.25□□□□□ -2.21
PTCD1O75127 RNA5SP227-201ENST00000516184 113 ntBASIC1.25□□□□□ -2.21
PTCD1O75127 MIR548AG1-201ENST00000579932 66 ntBASIC1.25□□□□□ -2.21
PTCD1O75127 MIR7107-201ENST00000611489 80 ntBASIC1.25□□□□□ -2.21
PTCD1O75127 Y_RNA.246-201ENST00000364495 108 ntBASIC1.24□□□□□ -2.21
PTCD1O75127 RNU4-45P-201ENST00000365469 141 ntBASIC1.24□□□□□ -2.21
PTCD1O75127 CYP3A137P-201ENST00000562436 69 ntBASIC1.24□□□□□ -2.21
PTCD1O75127 MIR4698-201ENST00000577795 80 ntBASIC1.24□□□□□ -2.21
PTCD1O75127 SNORA36.2-201ENST00000384004 127 ntBASIC1.23□□□□□ -2.21
PTCD1O75127 SNORA15B-2-201ENST00000384058 135 ntBASIC1.23□□□□□ -2.21
PTCD1O75127 SNORA15B-1-201ENST00000384334 135 ntBASIC1.23□□□□□ -2.21
PTCD1O75127 MIR532-201ENST00000385025 91 ntBASIC1.23□□□□□ -2.21
PTCD1O75127 RNU1-29P-201ENST00000606574 126 ntBASIC1.23□□□□□ -2.21
PTCD1O75127 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.23□□□□□ -2.21
PTCD1O75127 RNU6-753P-201ENST00000363926 107 ntBASIC1.22□□□□□ -2.21
PTCD1O75127 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
PTCD1O75127 AC006210.1-201ENST00000424882 111 ntBASIC1.22□□□□□ -2.21
PTCD1O75127 OR2A41P-201ENST00000473586 105 ntBASIC1.22□□□□□ -2.21
PTCD1O75127 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.22□□□□□ -2.21
PTCD1O75127 RNU6-980P-201ENST00000516925 103 ntBASIC1.22□□□□□ -2.21
PTCD1O75127 CYP3A54P-201ENST00000566950 75 ntBASIC1.22□□□□□ -2.21
PTCD1O75127 Y_RNA.379-201ENST00000365653 102 ntBASIC1.21□□□□□ -2.22
PTCD1O75127 MIR516B1-201ENST00000385211 90 ntBASIC1.21□□□□□ -2.22
PTCD1O75127 SNORD110-201ENST00000408189 75 ntBASIC1.21□□□□□ -2.22
PTCD1O75127 RNA5SP268-201ENST00000516828 124 ntBASIC1.21□□□□□ -2.22
PTCD1O75127 RNA5SP94-201ENST00000516917 108 ntBASIC1.21□□□□□ -2.22
PTCD1O75127 RNU6-231P-201ENST00000517122 103 ntBASIC1.21□□□□□ -2.22
PTCD1O75127 uc_338.10-201ENST00000621872 182 ntBASIC1.21□□□□□ -2.22
PTCD1O75127 RNY1P8-201ENST00000383970 114 ntBASIC1.2□□□□□ -2.22
PTCD1O75127 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
PTCD1O75127 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.2□□□□□ -2.22
PTCD1O75127 HMGN2P22-201ENST00000427588 175 ntBASIC1.2□□□□□ -2.22
PTCD1O75127 MIR6857-201ENST00000613267 93 ntBASIC1.2□□□□□ -2.22
PTCD1O75127 RNU6-35P-201ENST00000384530 107 ntBASIC1.19□□□□□ -2.22
PTCD1O75127 RNU6-520P-201ENST00000384717 104 ntBASIC1.19□□□□□ -2.22
PTCD1O75127 RNA5SP325-201ENST00000363756 130 ntBASIC1.18□□□□□ -2.22
PTCD1O75127 ACA64.5-201ENST00000516207 127 ntBASIC1.18□□□□□ -2.22
PTCD1O75127 SNORA40.16-201ENST00000517238 121 ntBASIC1.18□□□□□ -2.22
PTCD1O75127 RNU6-518P-201ENST00000516056 96 ntBASIC1.17□□□□□ -2.22
PTCD1O75127 MIR608-201ENST00000384820 100 ntBASIC1.16□□□□□ -2.22
PTCD1O75127 U6.96-201ENST00000636425 70 ntBASIC1.16□□□□□ -2.22
PTCD1O75127 Y_RNA.282-201ENST00000364793 102 ntBASIC1.15□□□□□ -2.23
PTCD1O75127 MIR519A2-201ENST00000384990 87 ntBASIC1.15□□□□□ -2.23
PTCD1O75127 SNORD116.2-201ENST00000391251 93 ntBASIC1.15□□□□□ -2.23
PTCD1O75127 SNORD116-16-201ENST00000384533 92 ntBASIC1.14□□□□□ -2.23
PTCD1O75127 SNORA49-201ENST00000386157 136 ntBASIC1.14□□□□□ -2.23
PTCD1O75127 RNU6-337P-201ENST00000391243 106 ntBASIC1.14□□□□□ -2.23
PTCD1O75127 MIR1255B2-201ENST00000408618 67 ntBASIC1.14□□□□□ -2.23
PTCD1O75127 AC243829.3-201ENST00000622177 108 ntBASIC1.14□□□□□ -2.23
PTCD1O75127 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
PTCD1O75127 Y_RNA.74-201ENST00000362911 99 ntBASIC1.12□□□□□ -2.23
PTCD1O75127 MIR140-201ENST00000385282 100 ntBASIC1.12□□□□□ -2.23
PTCD1O75127 AC069271.1-201ENST00000445577 156 ntBASIC1.12□□□□□ -2.23
PTCD1O75127 MIR4714-201ENST00000580728 77 ntBASIC1.12□□□□□ -2.23
PTCD1O75127 AC243829.6-201ENST00000612652 106 ntBASIC1.12□□□□□ -2.23
PTCD1O75127 RNU6-1232P-201ENST00000516299 86 ntBASIC1.11□□□□□ -2.23
PTCD1O75127 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.11□□□□□ -2.23
PTCD1O75127 AL021921.1-201ENST00000442774 93 ntBASIC1.1□□□□□ -2.23
PTCD1O75127 RNU7-119P-201ENST00000459279 63 ntBASIC1.1□□□□□ -2.23
PTCD1O75127 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.1□□□□□ -2.23
PTCD1O75127 SNORD1B-201ENST00000363091 84 ntBASIC1.09□□□□□ -2.23
PTCD1O75127 RNA5SP517-201ENST00000364724 117 ntBASIC1.09□□□□□ -2.23
PTCD1O75127 RNU6-810P-201ENST00000364001 107 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 240.9 ms