Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 MIR3202-2-201ENST00000635980 79 ntBASIC0.16□□□□□ -2.38
KDM1AO60341 RNA5SP214-201ENST00000363378 118 ntBASIC0.15□□□□□ -2.39
KDM1AO60341 RNU6-787P-201ENST00000384032 107 ntBASIC0.15□□□□□ -2.39
KDM1AO60341 MIR548E-201ENST00000408287 88 ntBASIC0.15□□□□□ -2.39
KDM1AO60341 AC023932.2-201ENST00000603176 175 ntBASIC0.15□□□□□ -2.39
KDM1AO60341 MIR6509-201ENST00000614603 85 ntBASIC0.15□□□□□ -2.39
KDM1AO60341 RN7SL660P-201ENST00000614852 299 ntBASIC0.15□□□□□ -2.39
KDM1AO60341 RNU6-990P-201ENST00000364385 104 ntBASIC0.14□□□□□ -2.39
KDM1AO60341 MIR582-201ENST00000365731 98 ntBASIC0.14□□□□□ -2.39
KDM1AO60341 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
KDM1AO60341 MIR330-201ENST00000362196 94 ntBASIC0.13□□□□□ -2.39
KDM1AO60341 SNORD114-9-201ENST00000364370 72 ntBASIC0.13□□□□□ -2.39
KDM1AO60341 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
KDM1AO60341 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
KDM1AO60341 RNA5SP163-201ENST00000410304 99 ntBASIC0.13□□□□□ -2.39
KDM1AO60341 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.13□□□□□ -2.39
KDM1AO60341 RNU6-175P-201ENST00000516896 107 ntBASIC0.13□□□□□ -2.39
KDM1AO60341 MIR4514-201ENST00000581410 57 ntBASIC0.13□□□□□ -2.39
KDM1AO60341 Y_RNA.219-201ENST00000364232 113 ntBASIC0.12□□□□□ -2.39
KDM1AO60341 Y_RNA.313-201ENST00000365095 103 ntBASIC0.12□□□□□ -2.39
KDM1AO60341 RNU6-573P-201ENST00000383938 106 ntBASIC0.12□□□□□ -2.39
KDM1AO60341 MIR593-201ENST00000384856 100 ntBASIC0.12□□□□□ -2.39
KDM1AO60341 RNU6-807P-201ENST00000516805 107 ntBASIC0.12□□□□□ -2.39
KDM1AO60341 MIR6514-201ENST00000622549 70 ntBASIC0.12□□□□□ -2.39
KDM1AO60341 MIR1297-201ENST00000637311 77 ntBASIC0.12□□□□□ -2.39
KDM1AO60341 RNU6-1094P-201ENST00000362416 104 ntBASIC0.11□□□□□ -2.39
KDM1AO60341 SNORD114-5-201ENST00000362928 70 ntBASIC0.11□□□□□ -2.39
KDM1AO60341 SNORA63.6-201ENST00000364921 119 ntBASIC0.11□□□□□ -2.39
KDM1AO60341 Y_RNA.532-201ENST00000384590 113 ntBASIC0.11□□□□□ -2.39
KDM1AO60341 MIR145-201ENST00000384967 88 ntBASIC0.11□□□□□ -2.39
KDM1AO60341 AC074348.1-201ENST00000426503 132 ntBASIC0.11□□□□□ -2.39
KDM1AO60341 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.11□□□□□ -2.39
KDM1AO60341 RNU6-260P-201ENST00000384092 107 ntBASIC0.1□□□□□ -2.39
KDM1AO60341 MIR106A-201ENST00000384870 81 ntBASIC0.1□□□□□ -2.39
KDM1AO60341 SNORD2-201ENST00000459163 69 ntBASIC0.1□□□□□ -2.39
KDM1AO60341 MIR8087-201ENST00000612745 78 ntBASIC0.1□□□□□ -2.39
KDM1AO60341 SNORA2.1-201ENST00000363089 137 ntBASIC0.09□□□□□ -2.4
KDM1AO60341 MIR203A-201ENST00000384836 110 ntBASIC0.09□□□□□ -2.4
KDM1AO60341 MIR7-2-201ENST00000384970 110 ntBASIC0.09□□□□□ -2.4
KDM1AO60341 CR383656.4-201ENST00000546909 122 ntBASIC0.09□□□□□ -2.4
KDM1AO60341 MIR3657-201ENST00000584818 117 ntBASIC0.09□□□□□ -2.4
KDM1AO60341 MIR148A-201ENST00000362215 68 ntBASIC0.08□□□□□ -2.4
KDM1AO60341 Y_RNA.94-201ENST00000363068 106 ntBASIC0.08□□□□□ -2.4
KDM1AO60341 RNU6-1036P-201ENST00000383959 104 ntBASIC0.08□□□□□ -2.4
KDM1AO60341 SNORA8.1-201ENST00000384250 140 ntBASIC0.08□□□□□ -2.4
KDM1AO60341 RNU7-159P-201ENST00000459284 62 ntBASIC0.08□□□□□ -2.4
KDM1AO60341 AC021146.9-201ENST00000512503 156 ntBASIC0.08□□□□□ -2.4
KDM1AO60341 SNORA72.7-201ENST00000516349 94 ntBASIC0.08□□□□□ -2.4
KDM1AO60341 RNU6-180P-201ENST00000516697 61 ntBASIC0.08□□□□□ -2.4
KDM1AO60341 RNU6-1124P-201ENST00000384169 107 ntBASIC0.07□□□□□ -2.4
KDM1AO60341 SNORA40.17-201ENST00000517256 115 ntBASIC0.07□□□□□ -2.4
KDM1AO60341 MIR4484-201ENST00000582855 83 ntBASIC0.06□□□□□ -2.4
KDM1AO60341 MIR6779-201ENST00000617283 64 ntBASIC0.06□□□□□ -2.4
KDM1AO60341 RNA5SP98-201ENST00000363158 137 ntBASIC0.05□□□□□ -2.4
KDM1AO60341 Y_RNA.205-201ENST00000364128 113 ntBASIC0.05□□□□□ -2.4
KDM1AO60341 Y_RNA.250-201ENST00000364542 110 ntBASIC0.05□□□□□ -2.4
KDM1AO60341 SNORA49-201ENST00000386157 136 ntBASIC0.05□□□□□ -2.4
KDM1AO60341 RNU7-165P-201ENST00000458864 60 ntBASIC0.05□□□□□ -2.4
KDM1AO60341 RNU6-228P-201ENST00000362700 106 ntBASIC0.04□□□□□ -2.4
KDM1AO60341 RNU6-330P-201ENST00000363015 107 ntBASIC0.04□□□□□ -2.4
KDM1AO60341 RNA5SP63-201ENST00000391225 112 ntBASIC0.04□□□□□ -2.4
KDM1AO60341 RNA5SP147-201ENST00000516493 109 ntBASIC0.03□□□□□ -2.4
KDM1AO60341 RNA5SP330-201ENST00000517096 96 ntBASIC0.03□□□□□ -2.4
KDM1AO60341 MIR3675-201ENST00000583661 73 ntBASIC0.03□□□□□ -2.4
KDM1AO60341 MIR6718-201ENST00000616153 80 ntBASIC0.03□□□□□ -2.4
KDM1AO60341 SNORD78.1-201ENST00000390866 65 ntBASIC0.02□□□□□ -2.41
KDM1AO60341 MIR4290-201ENST00000583807 95 ntBASIC0.02□□□□□ -2.41
KDM1AO60341 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
KDM1AO60341 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.02□□□□□ -2.41
KDM1AO60341 snoU13.13-201ENST00000458842 104 ntBASIC0.01□□□□□ -2.41
KDM1AO60341 SNORD115-25-201ENST00000362619 82 ntBASIC-0.01□□□□□ -2.41
KDM1AO60341 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
KDM1AO60341 RNU6-929P-201ENST00000384429 107 ntBASIC-0.01□□□□□ -2.41
KDM1AO60341 MIR1255A-201ENST00000408338 113 ntBASIC-0.01□□□□□ -2.41
KDM1AO60341 MIR1197-201ENST00000408818 88 ntBASIC-0.01□□□□□ -2.41
KDM1AO60341 SCARNA18B-201ENST00000458806 135 ntBASIC-0.01□□□□□ -2.41
KDM1AO60341 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.01□□□□□ -2.41
KDM1AO60341 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
KDM1AO60341 RNU6-279P-201ENST00000391297 101 ntBASIC-0.02□□□□□ -2.41
KDM1AO60341 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.03□□□□□ -2.41
KDM1AO60341 RNA5SP457-201ENST00000363657 124 ntBASIC-0.03□□□□□ -2.41
KDM1AO60341 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.03□□□□□ -2.41
KDM1AO60341 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.03□□□□□ -2.41
KDM1AO60341 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
KDM1AO60341 RNU6-857P-201ENST00000515893 110 ntBASIC-0.04□□□□□ -2.42
KDM1AO60341 AP000676.1-201ENST00000533307 52 ntBASIC-0.04□□□□□ -2.42
KDM1AO60341 AC145423.2-201ENST00000610631 239 ntBASIC-0.04□□□□□ -2.42
KDM1AO60341 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
KDM1AO60341 AC104692.1-201ENST00000472406 90 ntBASIC-0.05□□□□□ -2.42
KDM1AO60341 MIR5190-201ENST00000581537 80 ntBASIC-0.05□□□□□ -2.42
KDM1AO60341 AL109933.3-201ENST00000619095 188 ntBASIC-0.05□□□□□ -2.42
KDM1AO60341 MIR6739-201ENST00000622461 75 ntBASIC-0.05□□□□□ -2.42
KDM1AO60341 RNU6-46P-201ENST00000383860 107 ntBASIC-0.06□□□□□ -2.42
KDM1AO60341 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.06□□□□□ -2.42
KDM1AO60341 MIR6507-201ENST00000613630 70 ntBASIC-0.06□□□□□ -2.42
KDM1AO60341 RNU6-24P-201ENST00000384440 107 ntBASIC-0.07□□□□□ -2.42
KDM1AO60341 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
KDM1AO60341 RNU6-604P-201ENST00000390917 100 ntBASIC-0.07□□□□□ -2.42
KDM1AO60341 RNA5SP225-201ENST00000410874 135 ntBASIC-0.07□□□□□ -2.42
KDM1AO60341 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 192.9 ms