Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MIR7110-201ENST00000612638 86 ntBASIC1.45□□□□□ -2.18
ACTN4O43707 RNU1-124P-201ENST00000363861 145 ntBASIC1.44□□□□□ -2.18
ACTN4O43707 HMGN2P22-201ENST00000427588 175 ntBASIC1.44□□□□□ -2.18
ACTN4O43707 RNU6-980P-201ENST00000516925 103 ntBASIC1.44□□□□□ -2.18
ACTN4O43707 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.44□□□□□ -2.18
ACTN4O43707 AC243829.3-201ENST00000622177 108 ntBASIC1.44□□□□□ -2.18
ACTN4O43707 Y_RNA.282-201ENST00000364793 102 ntBASIC1.43□□□□□ -2.18
ACTN4O43707 MIR519A2-201ENST00000384990 87 ntBASIC1.43□□□□□ -2.18
ACTN4O43707 RNA5SP247-201ENST00000411181 105 ntBASIC1.43□□□□□ -2.18
ACTN4O43707 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
ACTN4O43707 MIR26B-201ENST00000362251 77 ntBASIC1.41□□□□□ -2.18
ACTN4O43707 SNORD2-201ENST00000459163 69 ntBASIC1.41□□□□□ -2.18
ACTN4O43707 MIR5706-201ENST00000579841 80 ntBASIC1.41□□□□□ -2.18
ACTN4O43707 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
ACTN4O43707 Y_RNA.164-201ENST00000363709 102 ntBASIC1.4□□□□□ -2.19
ACTN4O43707 AP1B1P2-201ENST00000416196 106 ntBASIC1.4□□□□□ -2.19
ACTN4O43707 RNU7-95P-201ENST00000459222 64 ntBASIC1.4□□□□□ -2.19
ACTN4O43707 TRMT112P2-201ENST00000512910 132 ntBASIC1.4□□□□□ -2.19
ACTN4O43707 SNORA40.16-201ENST00000517238 121 ntBASIC1.4□□□□□ -2.19
ACTN4O43707 MIR4421-201ENST00000578133 69 ntBASIC1.4□□□□□ -2.19
ACTN4O43707 RNU4-33P-201ENST00000364316 85 ntBASIC1.39□□□□□ -2.19
ACTN4O43707 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.38□□□□□ -2.19
ACTN4O43707 RNU6-321P-201ENST00000410912 106 ntBASIC1.38□□□□□ -2.19
ACTN4O43707 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.38□□□□□ -2.19
ACTN4O43707 SNORD114-29-201ENST00000364819 70 ntBASIC1.37□□□□□ -2.19
ACTN4O43707 RNU6-246P-201ENST00000384702 107 ntBASIC1.37□□□□□ -2.19
ACTN4O43707 AC069271.1-201ENST00000445577 156 ntBASIC1.36□□□□□ -2.19
ACTN4O43707 SNORA36.2-201ENST00000384004 127 ntBASIC1.35□□□□□ -2.19
ACTN4O43707 RNU6-35P-201ENST00000384530 107 ntBASIC1.35□□□□□ -2.19
ACTN4O43707 SNORA40B-201ENST00000385573 128 ntBASIC1.35□□□□□ -2.19
ACTN4O43707 RNU1-29P-201ENST00000606574 126 ntBASIC1.35□□□□□ -2.19
ACTN4O43707 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.35□□□□□ -2.19
ACTN4O43707 RNA5SP517-201ENST00000364724 117 ntBASIC1.34□□□□□ -2.19
ACTN4O43707 RNU7-154P-201ENST00000516194 62 ntBASIC1.34□□□□□ -2.19
ACTN4O43707 AL353765.1-201ENST00000605514 183 ntBASIC1.34□□□□□ -2.19
ACTN4O43707 U7.6-201ENST00000610841 64 ntBASIC1.34□□□□□ -2.19
ACTN4O43707 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
ACTN4O43707 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.33□□□□□ -2.2
ACTN4O43707 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
ACTN4O43707 SNORD115-25-201ENST00000362619 82 ntBASIC1.33□□□□□ -2.2
ACTN4O43707 RNU6-810P-201ENST00000364001 107 ntBASIC1.33□□□□□ -2.2
ACTN4O43707 RNU6-337P-201ENST00000391243 106 ntBASIC1.33□□□□□ -2.2
ACTN4O43707 RNU6-172P-201ENST00000411000 93 ntBASIC1.33□□□□□ -2.2
ACTN4O43707 MIR548X-201ENST00000580069 75 ntBASIC1.33□□□□□ -2.2
ACTN4O43707 MIR6773-201ENST00000612812 74 ntBASIC1.33□□□□□ -2.2
ACTN4O43707 MIR429-201ENST00000362106 83 ntBASIC1.32□□□□□ -2.2
ACTN4O43707 Y_RNA.327-201ENST00000365201 102 ntBASIC1.32□□□□□ -2.2
ACTN4O43707 RNY1P8-201ENST00000383970 114 ntBASIC1.32□□□□□ -2.2
ACTN4O43707 RNU6-939P-201ENST00000384634 107 ntBASIC1.32□□□□□ -2.2
ACTN4O43707 MIR499A-201ENST00000384903 122 ntBASIC1.32□□□□□ -2.2
ACTN4O43707 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
ACTN4O43707 RNU6-930P-201ENST00000390938 100 ntBASIC1.32□□□□□ -2.2
ACTN4O43707 MIR1287-201ENST00000408492 90 ntBASIC1.32□□□□□ -2.2
ACTN4O43707 RNA5SP470-201ENST00000516463 106 ntBASIC1.32□□□□□ -2.2
ACTN4O43707 Y_RNA.226-201ENST00000364337 114 ntBASIC1.31□□□□□ -2.2
ACTN4O43707 RNU7-188P-201ENST00000517063 64 ntBASIC1.31□□□□□ -2.2
ACTN4O43707 SNORA25.18-201ENST00000607153 114 ntBASIC1.31□□□□□ -2.2
ACTN4O43707 SNORD1B-201ENST00000363091 84 ntBASIC1.3□□□□□ -2.2
ACTN4O43707 Y_RNA.109-201ENST00000363215 102 ntBASIC1.3□□□□□ -2.2
ACTN4O43707 SNORA2A-201ENST00000383885 135 ntBASIC1.3□□□□□ -2.2
ACTN4O43707 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.3□□□□□ -2.2
ACTN4O43707 RNU6-229P-201ENST00000516614 102 ntBASIC1.3□□□□□ -2.2
ACTN4O43707 MIR548AG1-201ENST00000579932 66 ntBASIC1.3□□□□□ -2.2
ACTN4O43707 AL353770.2-201ENST00000620024 78 ntBASIC1.3□□□□□ -2.2
ACTN4O43707 RNU6-392P-201ENST00000364926 101 ntBASIC1.29□□□□□ -2.2
ACTN4O43707 MIR6078-201ENST00000611069 100 ntBASIC1.29□□□□□ -2.2
ACTN4O43707 MIR1285-1-201ENST00000408593 84 ntBASIC1.28□□□□□ -2.2
ACTN4O43707 MIR140-201ENST00000385282 100 ntBASIC1.27□□□□□ -2.21
ACTN4O43707 SNORA49-201ENST00000386157 136 ntBASIC1.27□□□□□ -2.21
ACTN4O43707 ACA64.5-201ENST00000516207 127 ntBASIC1.26□□□□□ -2.21
ACTN4O43707 MIR8070-201ENST00000616510 88 ntBASIC1.26□□□□□ -2.21
ACTN4O43707 RNU6-458P-201ENST00000384179 107 ntBASIC1.25□□□□□ -2.21
ACTN4O43707 MIRLET7B-201ENST00000385140 83 ntBASIC1.25□□□□□ -2.21
ACTN4O43707 U6.58-201ENST00000613107 107 ntBASIC1.25□□□□□ -2.21
ACTN4O43707 Y_RNA.423-201ENST00000384057 113 ntBASIC1.24□□□□□ -2.21
ACTN4O43707 SNORD118-201ENST00000363593 134 ntBASIC1.23□□□□□ -2.21
ACTN4O43707 SNORA40.8-201ENST00000411034 126 ntBASIC1.23□□□□□ -2.21
ACTN4O43707 RNU6-782P-201ENST00000516852 104 ntBASIC1.23□□□□□ -2.21
ACTN4O43707 RNU6-175P-201ENST00000516896 107 ntBASIC1.23□□□□□ -2.21
ACTN4O43707 RNU6-1036P-201ENST00000383959 104 ntBASIC1.22□□□□□ -2.21
ACTN4O43707 SNORD71-201ENST00000411292 86 ntBASIC1.22□□□□□ -2.21
ACTN4O43707 MIR4661-201ENST00000582720 75 ntBASIC1.22□□□□□ -2.21
ACTN4O43707 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.22□□□□□ -2.21
ACTN4O43707 AC084368.1-201ENST00000620935 65 ntBASIC1.22□□□□□ -2.21
ACTN4O43707 RNU6-502P-201ENST00000362419 108 ntBASIC1.21□□□□□ -2.22
ACTN4O43707 RNU6-1232P-201ENST00000516299 86 ntBASIC1.21□□□□□ -2.22
ACTN4O43707 MIR4490-201ENST00000582647 84 ntBASIC1.21□□□□□ -2.22
ACTN4O43707 MIR4677-201ENST00000584153 80 ntBASIC1.21□□□□□ -2.22
ACTN4O43707 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.19□□□□□ -2.22
ACTN4O43707 SNORD114-21-201ENST00000606412 72 ntBASIC1.19□□□□□ -2.22
ACTN4O43707 MIR6504-201ENST00000613520 61 ntBASIC1.19□□□□□ -2.22
ACTN4O43707 MIR548F3-201ENST00000408509 87 ntBASIC1.18□□□□□ -2.22
ACTN4O43707 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
ACTN4O43707 MIR579-201ENST00000385221 98 ntBASIC1.16□□□□□ -2.22
ACTN4O43707 MIR501-201ENST00000390204 84 ntBASIC1.16□□□□□ -2.22
ACTN4O43707 RNU6-419P-201ENST00000517030 63 ntBASIC1.16□□□□□ -2.22
ACTN4O43707 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
ACTN4O43707 RNU6-838P-201ENST00000363399 108 ntBASIC1.15□□□□□ -2.23
ACTN4O43707 Y_RNA.224-201ENST00000364308 111 ntBASIC1.15□□□□□ -2.23
ACTN4O43707 MIR608-201ENST00000384820 100 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 229.5 ms