Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.52□□□□□ -2.49
NKX2-6A6NCS4 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.52□□□□□ -2.49
NKX2-6A6NCS4 SNORD75.2-201ENST00000408784 58 ntBASIC-0.52□□□□□ -2.49
NKX2-6A6NCS4 RNU6-589P-201ENST00000516485 107 ntBASIC-0.52□□□□□ -2.49
NKX2-6A6NCS4 MIR3681-201ENST00000580089 72 ntBASIC-0.52□□□□□ -2.49
NKX2-6A6NCS4 MIR4773-1-201ENST00000637203 78 ntBASIC-0.52□□□□□ -2.49
NKX2-6A6NCS4 SNORD114-14-201ENST00000362723 75 ntBASIC-0.53□□□□□ -2.49
NKX2-6A6NCS4 RNU6-824P-201ENST00000363724 104 ntBASIC-0.53□□□□□ -2.49
NKX2-6A6NCS4 SNORD116-10-201ENST00000363791 102 ntBASIC-0.53□□□□□ -2.49
NKX2-6A6NCS4 SNORA63.6-201ENST00000364921 119 ntBASIC-0.53□□□□□ -2.49
NKX2-6A6NCS4 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.53□□□□□ -2.49
NKX2-6A6NCS4 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.53□□□□□ -2.49
NKX2-6A6NCS4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
NKX2-6A6NCS4 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.53□□□□□ -2.49
NKX2-6A6NCS4 RNU6-337P-201ENST00000391243 106 ntBASIC-0.53□□□□□ -2.49
NKX2-6A6NCS4 SNORD2-201ENST00000459163 69 ntBASIC-0.53□□□□□ -2.49
NKX2-6A6NCS4 RNA5SP147-201ENST00000516493 109 ntBASIC-0.53□□□□□ -2.49
NKX2-6A6NCS4 MIR6773-201ENST00000612812 74 ntBASIC-0.53□□□□□ -2.49
NKX2-6A6NCS4 MIR8068-201ENST00000618032 68 ntBASIC-0.53□□□□□ -2.49
NKX2-6A6NCS4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.53□□□□□ -2.49
NKX2-6A6NCS4 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.54□□□□□ -2.5
NKX2-6A6NCS4 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.54□□□□□ -2.5
NKX2-6A6NCS4 MIR204-201ENST00000385200 110 ntBASIC-0.54□□□□□ -2.5
NKX2-6A6NCS4 SNORA40.17-201ENST00000517256 115 ntBASIC-0.54□□□□□ -2.5
NKX2-6A6NCS4 MIR4796-201ENST00000580742 81 ntBASIC-0.54□□□□□ -2.5
NKX2-6A6NCS4 MIR3910-1-201ENST00000580936 111 ntBASIC-0.54□□□□□ -2.5
NKX2-6A6NCS4 MIR450A1-201ENST00000362262 91 ntBASIC-0.55□□□□□ -2.5
NKX2-6A6NCS4 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.55□□□□□ -2.5
NKX2-6A6NCS4 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.55□□□□□ -2.5
NKX2-6A6NCS4 AC021146.9-201ENST00000512503 156 ntBASIC-0.55□□□□□ -2.5
NKX2-6A6NCS4 MIR4436A-201ENST00000585278 85 ntBASIC-0.55□□□□□ -2.5
NKX2-6A6NCS4 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.56□□□□□ -2.5
NKX2-6A6NCS4 SNORD115-27-201ENST00000364430 82 ntBASIC-0.56□□□□□ -2.5
NKX2-6A6NCS4 RNU6-973P-201ENST00000364690 107 ntBASIC-0.56□□□□□ -2.5
NKX2-6A6NCS4 RNU7-24P-201ENST00000458867 62 ntBASIC-0.56□□□□□ -2.5
NKX2-6A6NCS4 MIR6851-201ENST00000617060 67 ntBASIC-0.56□□□□□ -2.5
NKX2-6A6NCS4 AC090617.8-201ENST00000623339 167 ntBASIC-0.56□□□□□ -2.5
NKX2-6A6NCS4 RNU6-766P-201ENST00000362478 107 ntBASIC-0.57□□□□□ -2.5
NKX2-6A6NCS4 RNU5F-1-201ENST00000362507 117 ntBASIC-0.57□□□□□ -2.5
NKX2-6A6NCS4 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.57□□□□□ -2.5
NKX2-6A6NCS4 MIR587-201ENST00000384845 96 ntBASIC-0.57□□□□□ -2.5
NKX2-6A6NCS4 SNORA3B-201ENST00000391305 131 ntBASIC-0.57□□□□□ -2.5
NKX2-6A6NCS4 RNU6-313P-201ENST00000516317 112 ntBASIC-0.57□□□□□ -2.5
NKX2-6A6NCS4 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.57□□□□□ -2.5
NKX2-6A6NCS4 AC006254.2-201ENST00000603259 279 ntBASIC-0.57□□□□□ -2.5
NKX2-6A6NCS4 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.57□□□□□ -2.5
NKX2-6A6NCS4 U6.96-201ENST00000636425 70 ntBASIC-0.57□□□□□ -2.5
NKX2-6A6NCS4 AC132825.6-201ENST00000638861 357 ntBASIC-0.57□□□□□ -2.5
NKX2-6A6NCS4 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.58□□□□□ -2.5
NKX2-6A6NCS4 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.58□□□□□ -2.5
NKX2-6A6NCS4 RNU6-260P-201ENST00000384092 107 ntBASIC-0.58□□□□□ -2.5
NKX2-6A6NCS4 MIR1236-201ENST00000408340 102 ntBASIC-0.58□□□□□ -2.5
NKX2-6A6NCS4 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.58□□□□□ -2.5
NKX2-6A6NCS4 MIR6509-201ENST00000614603 85 ntBASIC-0.58□□□□□ -2.5
NKX2-6A6NCS4 MIRLET7B-201ENST00000385140 83 ntBASIC-0.59□□□□□ -2.5
NKX2-6A6NCS4 MTATP8P2-201ENST00000435212 202 ntBASIC-0.59□□□□□ -2.5
NKX2-6A6NCS4 RNU6-479P-201ENST00000516348 105 ntBASIC-0.59□□□□□ -2.5
NKX2-6A6NCS4 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.59□□□□□ -2.5
NKX2-6A6NCS4 snoR1.1-201ENST00000628177 80 ntBASIC-0.59□□□□□ -2.5
NKX2-6A6NCS4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.59□□□□□ -2.5
NKX2-6A6NCS4 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.6□□□□□ -2.51
NKX2-6A6NCS4 AL691482.2-201ENST00000457453 84 ntBASIC-0.6□□□□□ -2.51
NKX2-6A6NCS4 SNORA13-201ENST00000458790 133 ntBASIC-0.6□□□□□ -2.51
NKX2-6A6NCS4 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.6□□□□□ -2.51
NKX2-6A6NCS4 MIR6854-201ENST00000614935 69 ntBASIC-0.6□□□□□ -2.51
NKX2-6A6NCS4 MIR198-201ENST00000637333 62 ntBASIC-0.6□□□□□ -2.51
NKX2-6A6NCS4 RNU6-834P-201ENST00000362367 110 ntBASIC-0.61□□□□□ -2.51
NKX2-6A6NCS4 RNY1P7-201ENST00000384743 110 ntBASIC-0.61□□□□□ -2.51
NKX2-6A6NCS4 MIR601-201ENST00000385256 79 ntBASIC-0.61□□□□□ -2.51
NKX2-6A6NCS4 RNY4P18-201ENST00000391107 89 ntBASIC-0.61□□□□□ -2.51
NKX2-6A6NCS4 AL031737.1-201ENST00000450125 223 ntBASIC-0.61□□□□□ -2.51
NKX2-6A6NCS4 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.61□□□□□ -2.51
NKX2-6A6NCS4 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.62□□□□□ -2.51
NKX2-6A6NCS4 SNORA33.1-201ENST00000364957 130 ntBASIC-0.62□□□□□ -2.51
NKX2-6A6NCS4 RNU6-905P-201ENST00000384434 107 ntBASIC-0.62□□□□□ -2.51
NKX2-6A6NCS4 RNU2-51P-201ENST00000410708 197 ntBASIC-0.62□□□□□ -2.51
NKX2-6A6NCS4 RNU6-592P-201ENST00000411333 103 ntBASIC-0.62□□□□□ -2.51
NKX2-6A6NCS4 AL606753.1-201ENST00000427435 87 ntBASIC-0.62□□□□□ -2.51
NKX2-6A6NCS4 SNORD22.1-201ENST00000516331 125 ntBASIC-0.62□□□□□ -2.51
NKX2-6A6NCS4 MIR3657-201ENST00000584818 117 ntBASIC-0.62□□□□□ -2.51
NKX2-6A6NCS4 SNORD115-23-201ENST00000364461 82 ntBASIC-0.63□□□□□ -2.51
NKX2-6A6NCS4 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.63□□□□□ -2.51
NKX2-6A6NCS4 RNU6-721P-201ENST00000410155 105 ntBASIC-0.63□□□□□ -2.51
NKX2-6A6NCS4 U6.81-201ENST00000612550 106 ntBASIC-0.63□□□□□ -2.51
NKX2-6A6NCS4 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.64□□□□□ -2.51
NKX2-6A6NCS4 MIR518B-201ENST00000385127 83 ntBASIC-0.64□□□□□ -2.51
NKX2-6A6NCS4 RNU6-274P-201ENST00000459566 107 ntBASIC-0.64□□□□□ -2.51
NKX2-6A6NCS4 MIR3179-1-201ENST00000578940 84 ntBASIC-0.64□□□□□ -2.51
NKX2-6A6NCS4 MIR3179-2-201ENST00000579107 84 ntBASIC-0.64□□□□□ -2.51
NKX2-6A6NCS4 MIR3179-3-201ENST00000579566 84 ntBASIC-0.64□□□□□ -2.51
NKX2-6A6NCS4 MIR3179-4-201ENST00000617599 84 ntBASIC-0.64□□□□□ -2.51
NKX2-6A6NCS4 MIR4320-201ENST00000636981 65 ntBASIC-0.64□□□□□ -2.51
NKX2-6A6NCS4 SNORA63.4-201ENST00000362763 126 ntBASIC-0.65□□□□□ -2.51
NKX2-6A6NCS4 MIR519C-201ENST00000385053 87 ntBASIC-0.65□□□□□ -2.51
NKX2-6A6NCS4 AL450471.1-201ENST00000447509 127 ntBASIC-0.65□□□□□ -2.51
NKX2-6A6NCS4 AC021146.6-201ENST00000514659 117 ntBASIC-0.65□□□□□ -2.51
NKX2-6A6NCS4 SCARNA17-201ENST00000516183 144 ntBASIC-0.65□□□□□ -2.51
NKX2-6A6NCS4 RNU6-208P-201ENST00000362431 107 ntBASIC-0.66□□□□□ -2.52
NKX2-6A6NCS4 SNORA2.1-201ENST00000363089 137 ntBASIC-0.66□□□□□ -2.52
NKX2-6A6NCS4 RNU6-10P-201ENST00000384036 107 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms