Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 SNORA2A-201ENST00000383885 135 ntBASIC0.5□□□□□ -2.33
AMBRA1Q9C0C7 RNU6-573P-201ENST00000383938 106 ntBASIC0.5□□□□□ -2.33
AMBRA1Q9C0C7 Y_RNA.423-201ENST00000384057 113 ntBASIC0.5□□□□□ -2.33
AMBRA1Q9C0C7 SNORA24B-201ENST00000384176 131 ntBASIC0.5□□□□□ -2.33
AMBRA1Q9C0C7 AC006210.1-201ENST00000424882 111 ntBASIC0.5□□□□□ -2.33
AMBRA1Q9C0C7 RNU6-863P-201ENST00000515989 104 ntBASIC0.5□□□□□ -2.33
AMBRA1Q9C0C7 RNA5SP476-201ENST00000516613 103 ntBASIC0.5□□□□□ -2.33
AMBRA1Q9C0C7 SNORA70.25-201ENST00000612741 95 ntBASIC0.5□□□□□ -2.33
AMBRA1Q9C0C7 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
AMBRA1Q9C0C7 AL450471.1-201ENST00000447509 127 ntBASIC0.49□□□□□ -2.33
AMBRA1Q9C0C7 HAR1A.1-201ENST00000459583 118 ntBASIC0.49□□□□□ -2.33
AMBRA1Q9C0C7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.49□□□□□ -2.33
AMBRA1Q9C0C7 SNORA72.7-201ENST00000516349 94 ntBASIC0.49□□□□□ -2.33
AMBRA1Q9C0C7 MIR4666B-201ENST00000578142 81 ntBASIC0.49□□□□□ -2.33
AMBRA1Q9C0C7 RNU1-29P-201ENST00000606574 126 ntBASIC0.49□□□□□ -2.33
AMBRA1Q9C0C7 RNU6-161P-201ENST00000363051 106 ntBASIC0.48□□□□□ -2.33
AMBRA1Q9C0C7 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
AMBRA1Q9C0C7 Y_RNA.264-201ENST00000364665 102 ntBASIC0.48□□□□□ -2.33
AMBRA1Q9C0C7 SNORA50A-201ENST00000384225 134 ntBASIC0.48□□□□□ -2.33
AMBRA1Q9C0C7 SNORD77.2-201ENST00000391045 68 ntBASIC0.48□□□□□ -2.33
AMBRA1Q9C0C7 RNU6-1177P-201ENST00000391058 104 ntBASIC0.48□□□□□ -2.33
AMBRA1Q9C0C7 AC097510.1-201ENST00000510945 133 ntBASIC0.48□□□□□ -2.33
AMBRA1Q9C0C7 RNU5B-6P-201ENST00000516765 68 ntBASIC0.48□□□□□ -2.33
AMBRA1Q9C0C7 YWHAEP2-201ENST00000580066 112 ntBASIC0.48□□□□□ -2.33
AMBRA1Q9C0C7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.48□□□□□ -2.33
AMBRA1Q9C0C7 RNU6-208P-201ENST00000362431 107 ntBASIC0.47□□□□□ -2.33
AMBRA1Q9C0C7 VTRNA1-3-201ENST00000365645 89 ntBASIC0.47□□□□□ -2.33
AMBRA1Q9C0C7 RNU6V-201ENST00000384105 107 ntBASIC0.47□□□□□ -2.33
AMBRA1Q9C0C7 Y_RNA.437-201ENST00000384113 113 ntBASIC0.47□□□□□ -2.33
AMBRA1Q9C0C7 RNU6-129P-201ENST00000391022 107 ntBASIC0.47□□□□□ -2.33
AMBRA1Q9C0C7 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.47□□□□□ -2.33
AMBRA1Q9C0C7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.47□□□□□ -2.33
AMBRA1Q9C0C7 SNORA68.3-201ENST00000515906 83 ntBASIC0.47□□□□□ -2.33
AMBRA1Q9C0C7 Y_RNA.660-201ENST00000516002 120 ntBASIC0.47□□□□□ -2.33
AMBRA1Q9C0C7 RNU6-557P-201ENST00000516842 110 ntBASIC0.47□□□□□ -2.33
AMBRA1Q9C0C7 Y_RNA.316-201ENST00000365118 111 ntBASIC0.46□□□□□ -2.34
AMBRA1Q9C0C7 RNU6-652P-201ENST00000365488 107 ntBASIC0.46□□□□□ -2.34
AMBRA1Q9C0C7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
AMBRA1Q9C0C7 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
AMBRA1Q9C0C7 RNU6-1108P-201ENST00000516308 104 ntBASIC0.46□□□□□ -2.34
AMBRA1Q9C0C7 U7.6-201ENST00000610841 64 ntBASIC0.46□□□□□ -2.34
AMBRA1Q9C0C7 MIR6755-201ENST00000619993 66 ntBASIC0.46□□□□□ -2.34
AMBRA1Q9C0C7 MIR6086-201ENST00000638065 55 ntBASIC0.46□□□□□ -2.34
AMBRA1Q9C0C7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.46□□□□□ -2.34
AMBRA1Q9C0C7 RNA5SP63-201ENST00000391225 112 ntBASIC0.45□□□□□ -2.34
AMBRA1Q9C0C7 RNA5SP285-201ENST00000516619 119 ntBASIC0.45□□□□□ -2.34
AMBRA1Q9C0C7 MIRLET7D-201ENST00000362263 87 ntBASIC0.44□□□□□ -2.34
AMBRA1Q9C0C7 RNU6-787P-201ENST00000384032 107 ntBASIC0.44□□□□□ -2.34
AMBRA1Q9C0C7 YWHAEP3-201ENST00000582767 121 ntBASIC0.44□□□□□ -2.34
AMBRA1Q9C0C7 MIR103A1-201ENST00000362165 78 ntBASIC0.43□□□□□ -2.34
AMBRA1Q9C0C7 RNU6-478P-201ENST00000363904 110 ntBASIC0.43□□□□□ -2.34
AMBRA1Q9C0C7 RNU6-686P-201ENST00000364839 107 ntBASIC0.43□□□□□ -2.34
AMBRA1Q9C0C7 Y_RNA.313-201ENST00000365095 103 ntBASIC0.43□□□□□ -2.34
AMBRA1Q9C0C7 RNU6-54P-201ENST00000365563 107 ntBASIC0.43□□□□□ -2.34
AMBRA1Q9C0C7 RNU6-1232P-201ENST00000516299 86 ntBASIC0.43□□□□□ -2.34
AMBRA1Q9C0C7 RNU6-495P-201ENST00000362995 107 ntBASIC0.42□□□□□ -2.34
AMBRA1Q9C0C7 Y_RNA.219-201ENST00000364232 113 ntBASIC0.42□□□□□ -2.34
AMBRA1Q9C0C7 Y_RNA.371-201ENST00000365591 113 ntBASIC0.42□□□□□ -2.34
AMBRA1Q9C0C7 MIR760-201ENST00000390220 80 ntBASIC0.42□□□□□ -2.34
AMBRA1Q9C0C7 MIR4514-201ENST00000581410 57 ntBASIC0.42□□□□□ -2.34
AMBRA1Q9C0C7 uc_338.10-201ENST00000621872 182 ntBASIC0.42□□□□□ -2.34
AMBRA1Q9C0C7 MIR3202-2-201ENST00000635980 79 ntBASIC0.42□□□□□ -2.34
AMBRA1Q9C0C7 MIR1245B-201ENST00000636115 69 ntBASIC0.42□□□□□ -2.34
AMBRA1Q9C0C7 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
AMBRA1Q9C0C7 Y_RNA.12-201ENST00000362393 112 ntBASIC0.41□□□□□ -2.34
AMBRA1Q9C0C7 Y_RNA.125-201ENST00000363371 111 ntBASIC0.41□□□□□ -2.34
AMBRA1Q9C0C7 RNU6-824P-201ENST00000363724 104 ntBASIC0.41□□□□□ -2.34
AMBRA1Q9C0C7 Y_RNA.606-201ENST00000410579 103 ntBASIC0.41□□□□□ -2.34
AMBRA1Q9C0C7 HMGN2P22-201ENST00000427588 175 ntBASIC0.41□□□□□ -2.34
AMBRA1Q9C0C7 RNU7-24P-201ENST00000458867 62 ntBASIC0.41□□□□□ -2.34
AMBRA1Q9C0C7 AC023932.2-201ENST00000603176 175 ntBASIC0.41□□□□□ -2.34
AMBRA1Q9C0C7 MIRLET7A1-201ENST00000362295 80 ntBASIC0.4□□□□□ -2.35
AMBRA1Q9C0C7 Y_RNA.407-201ENST00000383986 113 ntBASIC0.4□□□□□ -2.35
AMBRA1Q9C0C7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.4□□□□□ -2.35
AMBRA1Q9C0C7 RNU6-380P-201ENST00000410207 107 ntBASIC0.4□□□□□ -2.35
AMBRA1Q9C0C7 MIR4473-201ENST00000583731 91 ntBASIC0.4□□□□□ -2.35
AMBRA1Q9C0C7 RNU6-315P-201ENST00000362666 107 ntBASIC0.39□□□□□ -2.35
AMBRA1Q9C0C7 SNORD114-4-201ENST00000363962 75 ntBASIC0.39□□□□□ -2.35
AMBRA1Q9C0C7 RNU6-340P-201ENST00000364005 107 ntBASIC0.39□□□□□ -2.35
AMBRA1Q9C0C7 RNU6-681P-201ENST00000364012 104 ntBASIC0.39□□□□□ -2.35
AMBRA1Q9C0C7 RNA5SP128-201ENST00000365305 116 ntBASIC0.39□□□□□ -2.35
AMBRA1Q9C0C7 RNU6-1124P-201ENST00000384169 107 ntBASIC0.39□□□□□ -2.35
AMBRA1Q9C0C7 SNORD75.2-201ENST00000408784 58 ntBASIC0.39□□□□□ -2.35
AMBRA1Q9C0C7 U6.81-201ENST00000612550 106 ntBASIC0.39□□□□□ -2.35
AMBRA1Q9C0C7 MIR4773-1-201ENST00000637203 78 ntBASIC0.39□□□□□ -2.35
AMBRA1Q9C0C7 RNU6-382P-201ENST00000365181 106 ntBASIC0.38□□□□□ -2.35
AMBRA1Q9C0C7 SNORD78.1-201ENST00000390866 65 ntBASIC0.38□□□□□ -2.35
AMBRA1Q9C0C7 SNORD42B-201ENST00000458893 67 ntBASIC0.38□□□□□ -2.35
AMBRA1Q9C0C7 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.37□□□□□ -2.35
AMBRA1Q9C0C7 MIR499B-201ENST00000636498 73 ntBASIC0.37□□□□□ -2.35
AMBRA1Q9C0C7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
AMBRA1Q9C0C7 SNORA9.1-201ENST00000362412 131 ntBASIC0.36□□□□□ -2.35
AMBRA1Q9C0C7 RNU6-228P-201ENST00000362700 106 ntBASIC0.36□□□□□ -2.35
AMBRA1Q9C0C7 Y_RNA.94-201ENST00000363068 106 ntBASIC0.36□□□□□ -2.35
AMBRA1Q9C0C7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.36□□□□□ -2.35
AMBRA1Q9C0C7 RNU6-815P-201ENST00000384080 113 ntBASIC0.36□□□□□ -2.35
AMBRA1Q9C0C7 MIR652-201ENST00000385278 98 ntBASIC0.36□□□□□ -2.35
AMBRA1Q9C0C7 MIR501-201ENST00000390204 84 ntBASIC0.36□□□□□ -2.35
AMBRA1Q9C0C7 MIR1255A-201ENST00000408338 113 ntBASIC0.36□□□□□ -2.35
AMBRA1Q9C0C7 AC073261.1-201ENST00000429409 121 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms