Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SNORA3B-201ENST00000391305 131 ntBASIC-0.53□□□□□ -2.49
RPAP1Q9BWH6 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.53□□□□□ -2.49
RPAP1Q9BWH6 MIR4439-201ENST00000583746 80 ntBASIC-0.53□□□□□ -2.49
RPAP1Q9BWH6 MIR8068-201ENST00000618032 68 ntBASIC-0.53□□□□□ -2.49
RPAP1Q9BWH6 MIR3914-2-201ENST00000637339 95 ntBASIC-0.53□□□□□ -2.49
RPAP1Q9BWH6 SNORA63.2-201ENST00000362603 126 ntBASIC-0.54□□□□□ -2.5
RPAP1Q9BWH6 SNORD114-4-201ENST00000363962 75 ntBASIC-0.54□□□□□ -2.5
RPAP1Q9BWH6 RNU6-973P-201ENST00000364690 107 ntBASIC-0.54□□□□□ -2.5
RPAP1Q9BWH6 SNORD33.1-201ENST00000516213 88 ntBASIC-0.54□□□□□ -2.5
RPAP1Q9BWH6 RNU6-795P-201ENST00000516323 103 ntBASIC-0.54□□□□□ -2.5
RPAP1Q9BWH6 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.54□□□□□ -2.5
RPAP1Q9BWH6 SNORA40.17-201ENST00000517256 115 ntBASIC-0.54□□□□□ -2.5
RPAP1Q9BWH6 RNY1P9-201ENST00000532431 109 ntBASIC-0.54□□□□□ -2.5
RPAP1Q9BWH6 AC012531.4-201ENST00000616509 177 ntBASIC-0.54□□□□□ -2.5
RPAP1Q9BWH6 RNU6-990P-201ENST00000364385 104 ntBASIC-0.55□□□□□ -2.5
RPAP1Q9BWH6 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.55□□□□□ -2.5
RPAP1Q9BWH6 MIR204-201ENST00000385200 110 ntBASIC-0.55□□□□□ -2.5
RPAP1Q9BWH6 RNA5SP292-201ENST00000390974 118 ntBASIC-0.55□□□□□ -2.5
RPAP1Q9BWH6 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.56□□□□□ -2.5
RPAP1Q9BWH6 SNORD45B-201ENST00000364617 72 ntBASIC-0.56□□□□□ -2.5
RPAP1Q9BWH6 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.56□□□□□ -2.5
RPAP1Q9BWH6 RNU6-721P-201ENST00000410155 105 ntBASIC-0.56□□□□□ -2.5
RPAP1Q9BWH6 SNORD2-201ENST00000459163 69 ntBASIC-0.56□□□□□ -2.5
RPAP1Q9BWH6 RNU6-659P-201ENST00000516454 104 ntBASIC-0.56□□□□□ -2.5
RPAP1Q9BWH6 AC104996.3-201ENST00000590718 94 ntBASIC-0.56□□□□□ -2.5
RPAP1Q9BWH6 MIR6773-201ENST00000612812 74 ntBASIC-0.56□□□□□ -2.5
RPAP1Q9BWH6 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.57□□□□□ -2.5
RPAP1Q9BWH6 RNY1P5-201ENST00000383890 115 ntBASIC-0.57□□□□□ -2.5
RPAP1Q9BWH6 RNU6-80P-201ENST00000384195 107 ntBASIC-0.57□□□□□ -2.5
RPAP1Q9BWH6 AC090425.1-201ENST00000610007 140 ntBASIC-0.57□□□□□ -2.5
RPAP1Q9BWH6 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.57□□□□□ -2.5
RPAP1Q9BWH6 SNORA19.1-201ENST00000410656 129 ntBASIC-0.57□□□□□ -2.5
RPAP1Q9BWH6 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.57□□□□□ -2.5
RPAP1Q9BWH6 SNORA18.5-201ENST00000516616 101 ntBASIC-0.57□□□□□ -2.5
RPAP1Q9BWH6 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.58□□□□□ -2.5
RPAP1Q9BWH6 MIR518B-201ENST00000385127 83 ntBASIC-0.58□□□□□ -2.5
RPAP1Q9BWH6 MIRLET7B-201ENST00000385140 83 ntBASIC-0.58□□□□□ -2.5
RPAP1Q9BWH6 MIR548U-201ENST00000390728 81 ntBASIC-0.58□□□□□ -2.5
RPAP1Q9BWH6 RNU6-907P-201ENST00000390924 102 ntBASIC-0.58□□□□□ -2.5
RPAP1Q9BWH6 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.58□□□□□ -2.5
RPAP1Q9BWH6 RNU6-592P-201ENST00000411333 103 ntBASIC-0.58□□□□□ -2.5
RPAP1Q9BWH6 MIR6854-201ENST00000614935 69 ntBASIC-0.58□□□□□ -2.5
RPAP1Q9BWH6 AC090617.8-201ENST00000623339 167 ntBASIC-0.58□□□□□ -2.5
RPAP1Q9BWH6 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.59□□□□□ -2.5
RPAP1Q9BWH6 SNORD115-23-201ENST00000364461 82 ntBASIC-0.59□□□□□ -2.5
RPAP1Q9BWH6 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.59□□□□□ -2.5
RPAP1Q9BWH6 SNORA63.6-201ENST00000364921 119 ntBASIC-0.59□□□□□ -2.5
RPAP1Q9BWH6 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.59□□□□□ -2.5
RPAP1Q9BWH6 RNU6-905P-201ENST00000384434 107 ntBASIC-0.59□□□□□ -2.5
RPAP1Q9BWH6 MIR548A3-201ENST00000385297 97 ntBASIC-0.59□□□□□ -2.5
RPAP1Q9BWH6 RNU7-24P-201ENST00000458867 62 ntBASIC-0.59□□□□□ -2.5
RPAP1Q9BWH6 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.59□□□□□ -2.5
RPAP1Q9BWH6 SNORD22.1-201ENST00000516331 125 ntBASIC-0.59□□□□□ -2.5
RPAP1Q9BWH6 SNORD58A-201ENST00000383875 65 ntBASIC-0.6□□□□□ -2.51
RPAP1Q9BWH6 snosnR66.1-201ENST00000391095 99 ntBASIC-0.6□□□□□ -2.51
RPAP1Q9BWH6 SNORD75.2-201ENST00000408784 58 ntBASIC-0.6□□□□□ -2.51
RPAP1Q9BWH6 RNU6-519P-201ENST00000410590 108 ntBASIC-0.6□□□□□ -2.51
RPAP1Q9BWH6 snoU13.17-201ENST00000458802 104 ntBASIC-0.6□□□□□ -2.51
RPAP1Q9BWH6 MIR3179-1-201ENST00000578940 84 ntBASIC-0.6□□□□□ -2.51
RPAP1Q9BWH6 MIR3179-2-201ENST00000579107 84 ntBASIC-0.6□□□□□ -2.51
RPAP1Q9BWH6 MIR3179-3-201ENST00000579566 84 ntBASIC-0.6□□□□□ -2.51
RPAP1Q9BWH6 MIR3681-201ENST00000580089 72 ntBASIC-0.6□□□□□ -2.51
RPAP1Q9BWH6 MIR3179-4-201ENST00000617599 84 ntBASIC-0.6□□□□□ -2.51
RPAP1Q9BWH6 U6.95-201ENST00000636931 70 ntBASIC-0.6□□□□□ -2.51
RPAP1Q9BWH6 RNU6-62P-201ENST00000516526 102 ntBASIC-0.61□□□□□ -2.51
RPAP1Q9BWH6 RNU6-794P-201ENST00000517261 64 ntBASIC-0.61□□□□□ -2.51
RPAP1Q9BWH6 RNU6-824P-201ENST00000363724 104 ntBASIC-0.62□□□□□ -2.51
RPAP1Q9BWH6 RNU4-36P-201ENST00000364294 144 ntBASIC-0.62□□□□□ -2.51
RPAP1Q9BWH6 RNU6-382P-201ENST00000365181 106 ntBASIC-0.62□□□□□ -2.51
RPAP1Q9BWH6 SNX3P1X-201ENST00000414887 175 ntBASIC-0.62□□□□□ -2.51
RPAP1Q9BWH6 AC021146.6-201ENST00000514659 117 ntBASIC-0.62□□□□□ -2.51
RPAP1Q9BWH6 RNU6-904P-201ENST00000516206 101 ntBASIC-0.62□□□□□ -2.51
RPAP1Q9BWH6 RNU6-881P-201ENST00000516813 102 ntBASIC-0.62□□□□□ -2.51
RPAP1Q9BWH6 RNU6-537P-201ENST00000517277 103 ntBASIC-0.62□□□□□ -2.51
RPAP1Q9BWH6 AC026421.1-201ENST00000519101 163 ntBASIC-0.62□□□□□ -2.51
RPAP1Q9BWH6 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.63□□□□□ -2.51
RPAP1Q9BWH6 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.63□□□□□ -2.51
RPAP1Q9BWH6 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.63□□□□□ -2.51
RPAP1Q9BWH6 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.63□□□□□ -2.51
RPAP1Q9BWH6 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
RPAP1Q9BWH6 SNORA13-201ENST00000458790 133 ntBASIC-0.63□□□□□ -2.51
RPAP1Q9BWH6 SCARNA23-201ENST00000516060 130 ntBASIC-0.63□□□□□ -2.51
RPAP1Q9BWH6 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.63□□□□□ -2.51
RPAP1Q9BWH6 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.64□□□□□ -2.51
RPAP1Q9BWH6 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
RPAP1Q9BWH6 AC021146.9-201ENST00000512503 156 ntBASIC-0.64□□□□□ -2.51
RPAP1Q9BWH6 YWHAEP3-201ENST00000582767 121 ntBASIC-0.64□□□□□ -2.51
RPAP1Q9BWH6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.64□□□□□ -2.51
RPAP1Q9BWH6 RNU4-32P-201ENST00000363404 141 ntBASIC-0.65□□□□□ -2.51
RPAP1Q9BWH6 RNU6-260P-201ENST00000384092 107 ntBASIC-0.65□□□□□ -2.51
RPAP1Q9BWH6 MIR517B-201ENST00000385102 67 ntBASIC-0.65□□□□□ -2.51
RPAP1Q9BWH6 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.65□□□□□ -2.51
RPAP1Q9BWH6 AP000533.3-201ENST00000447704 118 ntBASIC-0.65□□□□□ -2.51
RPAP1Q9BWH6 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.65□□□□□ -2.51
RPAP1Q9BWH6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.65□□□□□ -2.51
RPAP1Q9BWH6 SNORD74.6-201ENST00000364796 70 ntBASIC-0.66□□□□□ -2.51
RPAP1Q9BWH6 SNORD116-14-201ENST00000383894 92 ntBASIC-0.66□□□□□ -2.51
RPAP1Q9BWH6 SNORD116-17-201ENST00000383929 92 ntBASIC-0.66□□□□□ -2.51
RPAP1Q9BWH6 SNORD116-15-201ENST00000384445 92 ntBASIC-0.66□□□□□ -2.51
RPAP1Q9BWH6 SNORD116-21-201ENST00000384507 92 ntBASIC-0.66□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms