Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RPS29P1-201ENST00000465274 159 ntBASIC1.12□□□□□ -2.23
TRIM56Q9BRZ2 RNA5SP268-201ENST00000516828 124 ntBASIC1.12□□□□□ -2.23
TRIM56Q9BRZ2 RNA5SP94-201ENST00000516917 108 ntBASIC1.12□□□□□ -2.23
TRIM56Q9BRZ2 AC022709.1-201ENST00000615967 87 ntBASIC1.12□□□□□ -2.23
TRIM56Q9BRZ2 RNA5SP222-201ENST00000411039 105 ntBASIC1.11□□□□□ -2.23
TRIM56Q9BRZ2 AC125388.1-201ENST00000459631 156 ntBASIC1.11□□□□□ -2.23
TRIM56Q9BRZ2 MIR6515-201ENST00000619843 57 ntBASIC1.11□□□□□ -2.23
TRIM56Q9BRZ2 RNA5SP484-201ENST00000458857 111 ntBASIC1.1□□□□□ -2.23
TRIM56Q9BRZ2 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
TRIM56Q9BRZ2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
TRIM56Q9BRZ2 RNU6-1216P-201ENST00000362590 107 ntBASIC1.09□□□□□ -2.23
TRIM56Q9BRZ2 SNORD113.1-201ENST00000363280 73 ntBASIC1.09□□□□□ -2.23
TRIM56Q9BRZ2 SNORA36.1-201ENST00000363424 132 ntBASIC1.09□□□□□ -2.23
TRIM56Q9BRZ2 RNU6-800P-201ENST00000384473 103 ntBASIC1.09□□□□□ -2.23
TRIM56Q9BRZ2 MIR608-201ENST00000384820 100 ntBASIC1.09□□□□□ -2.23
TRIM56Q9BRZ2 SNORD42B-201ENST00000458893 67 ntBASIC1.09□□□□□ -2.23
TRIM56Q9BRZ2 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
TRIM56Q9BRZ2 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
TRIM56Q9BRZ2 RNU6-260P-201ENST00000384092 107 ntBASIC1.07□□□□□ -2.24
TRIM56Q9BRZ2 RNU6-110P-201ENST00000384508 104 ntBASIC1.07□□□□□ -2.24
TRIM56Q9BRZ2 MIR203A-201ENST00000384836 110 ntBASIC1.07□□□□□ -2.24
TRIM56Q9BRZ2 MIR3657-201ENST00000584818 117 ntBASIC1.07□□□□□ -2.24
TRIM56Q9BRZ2 MIR6767-201ENST00000637302 66 ntBASIC1.07□□□□□ -2.24
TRIM56Q9BRZ2 Y_RNA.340-201ENST00000365330 92 ntBASIC1.06□□□□□ -2.24
TRIM56Q9BRZ2 AC006210.1-201ENST00000424882 111 ntBASIC1.06□□□□□ -2.24
TRIM56Q9BRZ2 MTND4LP1-201ENST00000446263 157 ntBASIC1.06□□□□□ -2.24
TRIM56Q9BRZ2 MIR7107-201ENST00000611489 80 ntBASIC1.06□□□□□ -2.24
TRIM56Q9BRZ2 SNORA2.1-201ENST00000363089 137 ntBASIC1.05□□□□□ -2.24
TRIM56Q9BRZ2 SNORA25.4-201ENST00000363666 124 ntBASIC1.05□□□□□ -2.24
TRIM56Q9BRZ2 RNU6-630P-201ENST00000391258 106 ntBASIC1.05□□□□□ -2.24
TRIM56Q9BRZ2 RNU5B-6P-201ENST00000516765 68 ntBASIC1.05□□□□□ -2.24
TRIM56Q9BRZ2 RNU6-1223P-201ENST00000517124 104 ntBASIC1.05□□□□□ -2.24
TRIM56Q9BRZ2 MIR151B-201ENST00000584249 96 ntBASIC1.05□□□□□ -2.24
TRIM56Q9BRZ2 MIR6788-201ENST00000618842 66 ntBASIC1.05□□□□□ -2.24
TRIM56Q9BRZ2 PVT1_3.1-201ENST00000620853 95 ntBASIC1.05□□□□□ -2.24
TRIM56Q9BRZ2 SNORD114-26-201ENST00000363543 72 ntBASIC1.04□□□□□ -2.24
TRIM56Q9BRZ2 Y_RNA.443-201ENST00000384135 111 ntBASIC1.04□□□□□ -2.24
TRIM56Q9BRZ2 MIR548J-201ENST00000408833 112 ntBASIC1.04□□□□□ -2.24
TRIM56Q9BRZ2 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
TRIM56Q9BRZ2 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
TRIM56Q9BRZ2 Y_RNA.386-201ENST00000383913 105 ntBASIC1.03□□□□□ -2.24
TRIM56Q9BRZ2 SNORA36.2-201ENST00000384004 127 ntBASIC1.03□□□□□ -2.24
TRIM56Q9BRZ2 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
TRIM56Q9BRZ2 Y_RNA.250-201ENST00000364542 110 ntBASIC1.02□□□□□ -2.25
TRIM56Q9BRZ2 Y_RNA.407-201ENST00000383986 113 ntBASIC1.02□□□□□ -2.25
TRIM56Q9BRZ2 MIR140-201ENST00000385282 100 ntBASIC1.02□□□□□ -2.25
TRIM56Q9BRZ2 SNORD110-201ENST00000408189 75 ntBASIC1.02□□□□□ -2.25
TRIM56Q9BRZ2 MIR6779-201ENST00000617283 64 ntBASIC1.02□□□□□ -2.25
TRIM56Q9BRZ2 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
TRIM56Q9BRZ2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
TRIM56Q9BRZ2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.01□□□□□ -2.25
TRIM56Q9BRZ2 AC005520.4-201ENST00000604337 90 ntBASIC1.01□□□□□ -2.25
TRIM56Q9BRZ2 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
TRIM56Q9BRZ2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.01□□□□□ -2.25
TRIM56Q9BRZ2 RNU4-38P-201ENST00000364472 129 ntBASIC1□□□□□ -2.25
TRIM56Q9BRZ2 RNU6-471P-201ENST00000383944 106 ntBASIC1□□□□□ -2.25
TRIM56Q9BRZ2 SNORD116-24-201ENST00000384549 92 ntBASIC1□□□□□ -2.25
TRIM56Q9BRZ2 MIR598-201ENST00000384868 97 ntBASIC1□□□□□ -2.25
TRIM56Q9BRZ2 AC018659.1-201ENST00000551083 169 ntBASIC1□□□□□ -2.25
TRIM56Q9BRZ2 RNU6-982P-201ENST00000516216 102 ntBASIC0.99□□□□□ -2.25
TRIM56Q9BRZ2 AC092634.7-201ENST00000621022 103 ntBASIC0.99□□□□□ -2.25
TRIM56Q9BRZ2 RNA5SP325-201ENST00000363756 130 ntBASIC0.98□□□□□ -2.25
TRIM56Q9BRZ2 RNU6-668P-201ENST00000364180 107 ntBASIC0.98□□□□□ -2.25
TRIM56Q9BRZ2 RNU6-990P-201ENST00000364385 104 ntBASIC0.98□□□□□ -2.25
TRIM56Q9BRZ2 RNA5SP517-201ENST00000364724 117 ntBASIC0.97□□□□□ -2.25
TRIM56Q9BRZ2 MIR1265-201ENST00000408444 86 ntBASIC0.97□□□□□ -2.25
TRIM56Q9BRZ2 RNA5SP436-201ENST00000516020 115 ntBASIC0.97□□□□□ -2.25
TRIM56Q9BRZ2 ACA64.5-201ENST00000516207 127 ntBASIC0.97□□□□□ -2.25
TRIM56Q9BRZ2 RNA5SP147-201ENST00000516493 109 ntBASIC0.97□□□□□ -2.25
TRIM56Q9BRZ2 MIR5706-201ENST00000579841 80 ntBASIC0.97□□□□□ -2.25
TRIM56Q9BRZ2 MIR4473-201ENST00000583731 91 ntBASIC0.97□□□□□ -2.25
TRIM56Q9BRZ2 Y_RNA.205-201ENST00000364128 113 ntBASIC0.96□□□□□ -2.26
TRIM56Q9BRZ2 RNU6-645P-201ENST00000364649 106 ntBASIC0.96□□□□□ -2.26
TRIM56Q9BRZ2 RNY1P8-201ENST00000383970 114 ntBASIC0.96□□□□□ -2.26
TRIM56Q9BRZ2 SCARNA17.3-201ENST00000516381 125 ntBASIC0.96□□□□□ -2.26
TRIM56Q9BRZ2 SNORD71-201ENST00000411292 86 ntBASIC0.95□□□□□ -2.26
TRIM56Q9BRZ2 MIR6739-201ENST00000622461 75 ntBASIC0.95□□□□□ -2.26
TRIM56Q9BRZ2 MIR373-201ENST00000362273 69 ntBASIC0.94□□□□□ -2.26
TRIM56Q9BRZ2 RNU6-1162P-201ENST00000384443 104 ntBASIC0.94□□□□□ -2.26
TRIM56Q9BRZ2 SNORA40.8-201ENST00000411034 126 ntBASIC0.94□□□□□ -2.26
TRIM56Q9BRZ2 AL590095.2-201ENST00000604136 117 ntBASIC0.94□□□□□ -2.26
TRIM56Q9BRZ2 AC103706.3-201ENST00000636297 85 ntBASIC0.94□□□□□ -2.26
TRIM56Q9BRZ2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
TRIM56Q9BRZ2 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
TRIM56Q9BRZ2 PSMC1P5-201ENST00000512850 177 ntBASIC0.93□□□□□ -2.26
TRIM56Q9BRZ2 SNORA40.17-201ENST00000517256 115 ntBASIC0.93□□□□□ -2.26
TRIM56Q9BRZ2 MIR4653-201ENST00000585107 83 ntBASIC0.93□□□□□ -2.26
TRIM56Q9BRZ2 U7.6-201ENST00000610841 64 ntBASIC0.93□□□□□ -2.26
TRIM56Q9BRZ2 SNORA70.25-201ENST00000612741 95 ntBASIC0.93□□□□□ -2.26
TRIM56Q9BRZ2 MIR652-201ENST00000385278 98 ntBASIC0.92□□□□□ -2.26
TRIM56Q9BRZ2 AC021146.9-201ENST00000512503 156 ntBASIC0.92□□□□□ -2.26
TRIM56Q9BRZ2 MIR4752-201ENST00000579672 72 ntBASIC0.92□□□□□ -2.26
TRIM56Q9BRZ2 SNORA25.18-201ENST00000607153 114 ntBASIC0.92□□□□□ -2.26
TRIM56Q9BRZ2 MIR6857-201ENST00000613267 93 ntBASIC0.92□□□□□ -2.26
TRIM56Q9BRZ2 uc_338.10-201ENST00000621872 182 ntBASIC0.92□□□□□ -2.26
TRIM56Q9BRZ2 SNORD118-201ENST00000363593 134 ntBASIC0.91□□□□□ -2.26
TRIM56Q9BRZ2 MIR4698-201ENST00000577795 80 ntBASIC0.91□□□□□ -2.26
TRIM56Q9BRZ2 MIR4511-201ENST00000582784 87 ntBASIC0.91□□□□□ -2.26
TRIM56Q9BRZ2 MIR548AE1-201ENST00000583292 70 ntBASIC0.91□□□□□ -2.26
TRIM56Q9BRZ2 SNORA63.6-201ENST00000364921 119 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms