Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MIR548X-201ENST00000580069 75 ntBASIC1.8□□□□□ -2.12
CNTNAP3BQ96NU0 AL136317.1-201ENST00000612653 226 ntBASIC1.8□□□□□ -2.12
CNTNAP3BQ96NU0 Y_RNA.246-201ENST00000364495 108 ntBASIC1.79□□□□□ -2.12
CNTNAP3BQ96NU0 RNA5SP160-201ENST00000364866 120 ntBASIC1.79□□□□□ -2.12
CNTNAP3BQ96NU0 MIR9-3-201ENST00000385084 90 ntBASIC1.79□□□□□ -2.12
CNTNAP3BQ96NU0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.79□□□□□ -2.12
CNTNAP3BQ96NU0 MIR96-201ENST00000362288 78 ntBASIC1.78□□□□□ -2.12
CNTNAP3BQ96NU0 RNU1-141P-201ENST00000364623 158 ntBASIC1.78□□□□□ -2.12
CNTNAP3BQ96NU0 RNU7-90P-201ENST00000459216 62 ntBASIC1.78□□□□□ -2.12
CNTNAP3BQ96NU0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CNTNAP3BQ96NU0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
CNTNAP3BQ96NU0 SNORA7.1-201ENST00000363750 139 ntBASIC1.77□□□□□ -2.13
CNTNAP3BQ96NU0 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CNTNAP3BQ96NU0 RNU6-994P-201ENST00000410507 111 ntBASIC1.77□□□□□ -2.13
CNTNAP3BQ96NU0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CNTNAP3BQ96NU0 MIR520F-201ENST00000384824 87 ntBASIC1.76□□□□□ -2.13
CNTNAP3BQ96NU0 MIR545-201ENST00000385085 106 ntBASIC1.76□□□□□ -2.13
CNTNAP3BQ96NU0 MIR100-201ENST00000385259 80 ntBASIC1.76□□□□□ -2.13
CNTNAP3BQ96NU0 MIR644A-201ENST00000385262 94 ntBASIC1.76□□□□□ -2.13
CNTNAP3BQ96NU0 RNU5B-6P-201ENST00000516765 68 ntBASIC1.76□□□□□ -2.13
CNTNAP3BQ96NU0 MIR4639-201ENST00000584938 69 ntBASIC1.76□□□□□ -2.13
CNTNAP3BQ96NU0 MIR502-201ENST00000606349 86 ntBASIC1.76□□□□□ -2.13
CNTNAP3BQ96NU0 AC244669.1-204ENST00000621564 178 ntBASIC1.76□□□□□ -2.13
CNTNAP3BQ96NU0 RNU6-838P-201ENST00000363399 108 ntBASIC1.75□□□□□ -2.13
CNTNAP3BQ96NU0 RNU6-726P-201ENST00000364680 107 ntBASIC1.75□□□□□ -2.13
CNTNAP3BQ96NU0 SNORD28-201ENST00000384706 75 ntBASIC1.75□□□□□ -2.13
CNTNAP3BQ96NU0 RNU6-1246P-201ENST00000391064 107 ntBASIC1.75□□□□□ -2.13
CNTNAP3BQ96NU0 SNORD116.2-201ENST00000391251 93 ntBASIC1.75□□□□□ -2.13
CNTNAP3BQ96NU0 RPS29P1-201ENST00000465274 159 ntBASIC1.75□□□□□ -2.13
CNTNAP3BQ96NU0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.75□□□□□ -2.13
CNTNAP3BQ96NU0 MIR1-1-201ENST00000362147 71 ntBASIC1.74□□□□□ -2.13
CNTNAP3BQ96NU0 RNU6-910P-201ENST00000390844 107 ntBASIC1.74□□□□□ -2.13
CNTNAP3BQ96NU0 RNU6-135P-201ENST00000516769 101 ntBASIC1.74□□□□□ -2.13
CNTNAP3BQ96NU0 AC012493.3-201ENST00000604494 112 ntBASIC1.74□□□□□ -2.13
CNTNAP3BQ96NU0 SNORA9.1-201ENST00000362412 131 ntBASIC1.73□□□□□ -2.13
CNTNAP3BQ96NU0 SNORD116-16-201ENST00000384533 92 ntBASIC1.73□□□□□ -2.13
CNTNAP3BQ96NU0 MIR520E-201ENST00000384867 87 ntBASIC1.73□□□□□ -2.13
CNTNAP3BQ96NU0 MIR758-201ENST00000390227 88 ntBASIC1.73□□□□□ -2.13
CNTNAP3BQ96NU0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.73□□□□□ -2.13
CNTNAP3BQ96NU0 MIR1827-201ENST00000408549 66 ntBASIC1.73□□□□□ -2.13
CNTNAP3BQ96NU0 AC002350.1-201ENST00000490759 375 ntBASIC1.73□□□□□ -2.13
CNTNAP3BQ96NU0 RN7SL793P-201ENST00000583259 296 ntBASIC1.73□□□□□ -2.13
CNTNAP3BQ96NU0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.73□□□□□ -2.13
CNTNAP3BQ96NU0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.73□□□□□ -2.13
CNTNAP3BQ96NU0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CNTNAP3BQ96NU0 MIR517C-201ENST00000385103 95 ntBASIC1.72□□□□□ -2.13
CNTNAP3BQ96NU0 SNORD12-201ENST00000391002 90 ntBASIC1.72□□□□□ -2.13
CNTNAP3BQ96NU0 RNA5SP436-201ENST00000516020 115 ntBASIC1.72□□□□□ -2.13
CNTNAP3BQ96NU0 SNORD79.1-201ENST00000516069 84 ntBASIC1.72□□□□□ -2.13
CNTNAP3BQ96NU0 MIR151B-201ENST00000584249 96 ntBASIC1.72□□□□□ -2.13
CNTNAP3BQ96NU0 MIR7110-201ENST00000612638 86 ntBASIC1.72□□□□□ -2.13
CNTNAP3BQ96NU0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CNTNAP3BQ96NU0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
CNTNAP3BQ96NU0 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.71□□□□□ -2.14
CNTNAP3BQ96NU0 Y_RNA.74-201ENST00000362911 99 ntBASIC1.7□□□□□ -2.14
CNTNAP3BQ96NU0 RNU1-42P-201ENST00000364033 160 ntBASIC1.7□□□□□ -2.14
CNTNAP3BQ96NU0 SNORA63.6-201ENST00000364921 119 ntBASIC1.7□□□□□ -2.14
CNTNAP3BQ96NU0 SNORA8.2-201ENST00000384372 139 ntBASIC1.7□□□□□ -2.14
CNTNAP3BQ96NU0 SNORA40B-201ENST00000385573 128 ntBASIC1.7□□□□□ -2.14
CNTNAP3BQ96NU0 RNU6-269P-201ENST00000391077 97 ntBASIC1.7□□□□□ -2.14
CNTNAP3BQ96NU0 SNORA70.22-201ENST00000517160 124 ntBASIC1.7□□□□□ -2.14
CNTNAP3BQ96NU0 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
CNTNAP3BQ96NU0 MIR6788-201ENST00000618842 66 ntBASIC1.7□□□□□ -2.14
CNTNAP3BQ96NU0 RNU1-93P-201ENST00000364704 169 ntBASIC1.69□□□□□ -2.14
CNTNAP3BQ96NU0 SNORA25.8-201ENST00000364831 128 ntBASIC1.69□□□□□ -2.14
CNTNAP3BQ96NU0 RNA5SP47-201ENST00000517230 109 ntBASIC1.69□□□□□ -2.14
CNTNAP3BQ96NU0 SNORD53B-201ENST00000577887 78 ntBASIC1.69□□□□□ -2.14
CNTNAP3BQ96NU0 MIR582-201ENST00000365731 98 ntBASIC1.68□□□□□ -2.14
CNTNAP3BQ96NU0 MIR548L-201ENST00000408303 86 ntBASIC1.68□□□□□ -2.14
CNTNAP3BQ96NU0 RNA5SP484-201ENST00000458857 111 ntBASIC1.68□□□□□ -2.14
CNTNAP3BQ96NU0 SCARNA17.3-201ENST00000516381 125 ntBASIC1.68□□□□□ -2.14
CNTNAP3BQ96NU0 RNU1-92P-201ENST00000517017 135 ntBASIC1.68□□□□□ -2.14
CNTNAP3BQ96NU0 MIR4255-201ENST00000579351 72 ntBASIC1.68□□□□□ -2.14
CNTNAP3BQ96NU0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.68□□□□□ -2.14
CNTNAP3BQ96NU0 SNORD18A-201ENST00000363753 72 ntBASIC1.67□□□□□ -2.14
CNTNAP3BQ96NU0 Y_RNA.282-201ENST00000364793 102 ntBASIC1.67□□□□□ -2.14
CNTNAP3BQ96NU0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.67□□□□□ -2.14
CNTNAP3BQ96NU0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.67□□□□□ -2.14
CNTNAP3BQ96NU0 MIR548J-201ENST00000408833 112 ntBASIC1.67□□□□□ -2.14
CNTNAP3BQ96NU0 CYP3A54P-201ENST00000566950 75 ntBASIC1.67□□□□□ -2.14
CNTNAP3BQ96NU0 MIR4421-201ENST00000578133 69 ntBASIC1.67□□□□□ -2.14
CNTNAP3BQ96NU0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CNTNAP3BQ96NU0 MIR222-201ENST00000384992 110 ntBASIC1.66□□□□□ -2.14
CNTNAP3BQ96NU0 MIR652-201ENST00000385278 98 ntBASIC1.66□□□□□ -2.14
CNTNAP3BQ96NU0 RNU6-1250P-201ENST00000391218 107 ntBASIC1.66□□□□□ -2.14
CNTNAP3BQ96NU0 MIR548E-201ENST00000408287 88 ntBASIC1.66□□□□□ -2.14
CNTNAP3BQ96NU0 RNA5SP457-201ENST00000363657 124 ntBASIC1.65□□□□□ -2.15
CNTNAP3BQ96NU0 RNU6-810P-201ENST00000364001 107 ntBASIC1.65□□□□□ -2.15
CNTNAP3BQ96NU0 RNU6-716P-201ENST00000365621 103 ntBASIC1.65□□□□□ -2.15
CNTNAP3BQ96NU0 AL021921.1-201ENST00000442774 93 ntBASIC1.65□□□□□ -2.15
CNTNAP3BQ96NU0 MIR216A-201ENST00000385063 110 ntBASIC1.64□□□□□ -2.15
CNTNAP3BQ96NU0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
CNTNAP3BQ96NU0 RNU6-469P-201ENST00000516253 101 ntBASIC1.63□□□□□ -2.15
CNTNAP3BQ96NU0 RNU6-419P-201ENST00000517030 63 ntBASIC1.63□□□□□ -2.15
CNTNAP3BQ96NU0 AL353770.2-201ENST00000620024 78 ntBASIC1.63□□□□□ -2.15
CNTNAP3BQ96NU0 AC090617.8-201ENST00000623339 167 ntBASIC1.63□□□□□ -2.15
CNTNAP3BQ96NU0 AL162376.1-201ENST00000624117 175 ntBASIC1.63□□□□□ -2.15
CNTNAP3BQ96NU0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CNTNAP3BQ96NU0 Y_RNA.407-201ENST00000383986 113 ntBASIC1.62□□□□□ -2.15
CNTNAP3BQ96NU0 MIR4490-201ENST00000582647 84 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms