Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 SNORA24B-201ENST00000384176 131 ntBASIC0.55□□□□□ -2.32
RTF1Q92541 SNORD110-201ENST00000408189 75 ntBASIC0.55□□□□□ -2.32
RTF1Q92541 AC006210.1-201ENST00000424882 111 ntBASIC0.55□□□□□ -2.32
RTF1Q92541 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.55□□□□□ -2.32
RTF1Q92541 SNORA68.3-201ENST00000515906 83 ntBASIC0.55□□□□□ -2.32
RTF1Q92541 MIR4752-201ENST00000579672 72 ntBASIC0.55□□□□□ -2.32
RTF1Q92541 SNORA2A-201ENST00000383885 135 ntBASIC0.54□□□□□ -2.32
RTF1Q92541 RNU6-1052P-201ENST00000411398 104 ntBASIC0.54□□□□□ -2.32
RTF1Q92541 RNU6-719P-201ENST00000516671 104 ntBASIC0.54□□□□□ -2.32
RTF1Q92541 SNORA70.25-201ENST00000612741 95 ntBASIC0.54□□□□□ -2.32
RTF1Q92541 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.53□□□□□ -2.32
RTF1Q92541 RNA5SP285-201ENST00000516619 119 ntBASIC0.53□□□□□ -2.32
RTF1Q92541 U7.6-201ENST00000610841 64 ntBASIC0.53□□□□□ -2.32
RTF1Q92541 MIRLET7D-201ENST00000362263 87 ntBASIC0.52□□□□□ -2.33
RTF1Q92541 RNU6-1276P-201ENST00000365372 104 ntBASIC0.52□□□□□ -2.33
RTF1Q92541 Y_RNA.660-201ENST00000516002 120 ntBASIC0.52□□□□□ -2.33
RTF1Q92541 RNU6-557P-201ENST00000516842 110 ntBASIC0.52□□□□□ -2.33
RTF1Q92541 MIR6755-201ENST00000619993 66 ntBASIC0.52□□□□□ -2.33
RTF1Q92541 Y_RNA.264-201ENST00000364665 102 ntBASIC0.51□□□□□ -2.33
RTF1Q92541 VTRNA1-3-201ENST00000365645 89 ntBASIC0.51□□□□□ -2.33
RTF1Q92541 Y_RNA.423-201ENST00000384057 113 ntBASIC0.51□□□□□ -2.33
RTF1Q92541 SNORD77.2-201ENST00000391045 68 ntBASIC0.51□□□□□ -2.33
RTF1Q92541 Y_RNA.388-201ENST00000383919 113 ntBASIC0.5□□□□□ -2.33
RTF1Q92541 RNU6V-201ENST00000384105 107 ntBASIC0.5□□□□□ -2.33
RTF1Q92541 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
RTF1Q92541 RNU6-1177P-201ENST00000391058 104 ntBASIC0.5□□□□□ -2.33
RTF1Q92541 MIR1265-201ENST00000408444 86 ntBASIC0.5□□□□□ -2.33
RTF1Q92541 snoU13.17-201ENST00000458802 104 ntBASIC0.5□□□□□ -2.33
RTF1Q92541 AC097510.1-201ENST00000510945 133 ntBASIC0.5□□□□□ -2.33
RTF1Q92541 YWHAEP2-201ENST00000580066 112 ntBASIC0.5□□□□□ -2.33
RTF1Q92541 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
RTF1Q92541 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.49□□□□□ -2.33
RTF1Q92541 AL450471.1-201ENST00000447509 127 ntBASIC0.49□□□□□ -2.33
RTF1Q92541 AC090625.1-201ENST00000357130 210 ntBASIC0.48□□□□□ -2.33
RTF1Q92541 RNU6-208P-201ENST00000362431 107 ntBASIC0.48□□□□□ -2.33
RTF1Q92541 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.48□□□□□ -2.33
RTF1Q92541 MIR4666B-201ENST00000578142 81 ntBASIC0.48□□□□□ -2.33
RTF1Q92541 RNU6-129P-201ENST00000391022 107 ntBASIC0.47□□□□□ -2.33
RTF1Q92541 RNU6-592P-201ENST00000411333 103 ntBASIC0.47□□□□□ -2.33
RTF1Q92541 MIR103A1-201ENST00000362165 78 ntBASIC0.46□□□□□ -2.34
RTF1Q92541 Y_RNA.125-201ENST00000363371 111 ntBASIC0.46□□□□□ -2.34
RTF1Q92541 MIR760-201ENST00000390220 80 ntBASIC0.46□□□□□ -2.34
RTF1Q92541 HMGN2P22-201ENST00000427588 175 ntBASIC0.46□□□□□ -2.34
RTF1Q92541 RNU7-24P-201ENST00000458867 62 ntBASIC0.46□□□□□ -2.34
RTF1Q92541 SNORA72.7-201ENST00000516349 94 ntBASIC0.46□□□□□ -2.34
RTF1Q92541 Y_RNA.316-201ENST00000365118 111 ntBASIC0.45□□□□□ -2.34
RTF1Q92541 RNA5SP128-201ENST00000365305 116 ntBASIC0.45□□□□□ -2.34
RTF1Q92541 RNU6-54P-201ENST00000365563 107 ntBASIC0.45□□□□□ -2.34
RTF1Q92541 Y_RNA.437-201ENST00000384113 113 ntBASIC0.45□□□□□ -2.34
RTF1Q92541 RNU5B-6P-201ENST00000516765 68 ntBASIC0.45□□□□□ -2.34
RTF1Q92541 AL627230.5-201ENST00000619807 58 ntBASIC0.45□□□□□ -2.34
RTF1Q92541 RNU6-495P-201ENST00000362995 107 ntBASIC0.44□□□□□ -2.34
RTF1Q92541 RNU6-161P-201ENST00000363051 106 ntBASIC0.44□□□□□ -2.34
RTF1Q92541 RNA5SP173-201ENST00000364857 136 ntBASIC0.44□□□□□ -2.34
RTF1Q92541 RNA5SP63-201ENST00000391225 112 ntBASIC0.44□□□□□ -2.34
RTF1Q92541 Y_RNA.606-201ENST00000410579 103 ntBASIC0.44□□□□□ -2.34
RTF1Q92541 RNU6-1108P-201ENST00000516308 104 ntBASIC0.44□□□□□ -2.34
RTF1Q92541 U6.81-201ENST00000612550 106 ntBASIC0.44□□□□□ -2.34
RTF1Q92541 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
RTF1Q92541 RNU6-315P-201ENST00000362666 107 ntBASIC0.43□□□□□ -2.34
RTF1Q92541 RNU6-686P-201ENST00000364839 107 ntBASIC0.43□□□□□ -2.34
RTF1Q92541 RNU6-1327P-201ENST00000365302 105 ntBASIC0.43□□□□□ -2.34
RTF1Q92541 Y_RNA.407-201ENST00000383986 113 ntBASIC0.43□□□□□ -2.34
RTF1Q92541 SNORD75.2-201ENST00000408784 58 ntBASIC0.43□□□□□ -2.34
RTF1Q92541 MIR3202-2-201ENST00000635980 79 ntBASIC0.43□□□□□ -2.34
RTF1Q92541 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
RTF1Q92541 SNORA9.1-201ENST00000362412 131 ntBASIC0.42□□□□□ -2.34
RTF1Q92541 RNU6-824P-201ENST00000363724 104 ntBASIC0.42□□□□□ -2.34
RTF1Q92541 RNU6-478P-201ENST00000363904 110 ntBASIC0.42□□□□□ -2.34
RTF1Q92541 SNORD114-4-201ENST00000363962 75 ntBASIC0.42□□□□□ -2.34
RTF1Q92541 RNU7-129P-201ENST00000516128 62 ntBASIC0.42□□□□□ -2.34
RTF1Q92541 RNU6-1232P-201ENST00000516299 86 ntBASIC0.42□□□□□ -2.34
RTF1Q92541 YWHAEP3-201ENST00000582767 121 ntBASIC0.42□□□□□ -2.34
RTF1Q92541 MIR548AD-201ENST00000584780 82 ntBASIC0.42□□□□□ -2.34
RTF1Q92541 uc_338.10-201ENST00000621872 182 ntBASIC0.42□□□□□ -2.34
RTF1Q92541 MIR1245B-201ENST00000636115 69 ntBASIC0.42□□□□□ -2.34
RTF1Q92541 MIR501-201ENST00000390204 84 ntBASIC0.41□□□□□ -2.34
RTF1Q92541 MIR4473-201ENST00000583731 91 ntBASIC0.41□□□□□ -2.34
RTF1Q92541 MIRLET7A1-201ENST00000362295 80 ntBASIC0.4□□□□□ -2.35
RTF1Q92541 RNU6-681P-201ENST00000364012 104 ntBASIC0.4□□□□□ -2.35
RTF1Q92541 Y_RNA.219-201ENST00000364232 113 ntBASIC0.4□□□□□ -2.35
RTF1Q92541 RNU6-652P-201ENST00000365488 107 ntBASIC0.4□□□□□ -2.35
RTF1Q92541 RNU6-787P-201ENST00000384032 107 ntBASIC0.4□□□□□ -2.35
RTF1Q92541 MIR4514-201ENST00000581410 57 ntBASIC0.4□□□□□ -2.35
RTF1Q92541 MIR4677-201ENST00000584153 80 ntBASIC0.4□□□□□ -2.35
RTF1Q92541 Y_RNA.12-201ENST00000362393 112 ntBASIC0.39□□□□□ -2.35
RTF1Q92541 RNU6-340P-201ENST00000364005 107 ntBASIC0.39□□□□□ -2.35
RTF1Q92541 RNU6-382P-201ENST00000365181 106 ntBASIC0.39□□□□□ -2.35
RTF1Q92541 RNU6-573P-201ENST00000383938 106 ntBASIC0.39□□□□□ -2.35
RTF1Q92541 MIR329-2-201ENST00000385029 84 ntBASIC0.39□□□□□ -2.35
RTF1Q92541 RNU6-380P-201ENST00000410207 107 ntBASIC0.39□□□□□ -2.35
RTF1Q92541 AC073261.1-201ENST00000429409 121 ntBASIC0.39□□□□□ -2.35
RTF1Q92541 snoU13.19-201ENST00000459148 104 ntBASIC0.39□□□□□ -2.35
RTF1Q92541 AC069113.3-201ENST00000521019 150 ntBASIC0.39□□□□□ -2.35
RTF1Q92541 RNU6-815P-201ENST00000384080 113 ntBASIC0.38□□□□□ -2.35
RTF1Q92541 SNORD42B-201ENST00000458893 67 ntBASIC0.38□□□□□ -2.35
RTF1Q92541 AC108740.1-201ENST00000498629 225 ntBASIC0.38□□□□□ -2.35
RTF1Q92541 AC023932.2-201ENST00000603176 175 ntBASIC0.38□□□□□ -2.35
RTF1Q92541 RNU6-30P-201ENST00000384561 107 ntBASIC0.37□□□□□ -2.35
RTF1Q92541 RNU6-274P-201ENST00000459566 107 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms