Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MIR4303-201ENST00000581299 66 ntBASIC1.76□□□□□ -2.13
SCUBE3Q8IX30 Y_RNA.327-201ENST00000365201 102 ntBASIC1.75□□□□□ -2.13
SCUBE3Q8IX30 SNORA25-201ENST00000384384 134 ntBASIC1.75□□□□□ -2.13
SCUBE3Q8IX30 Y_RNA.633-201ENST00000459107 95 ntBASIC1.75□□□□□ -2.13
SCUBE3Q8IX30 RNU7-174P-201ENST00000516248 59 ntBASIC1.75□□□□□ -2.13
SCUBE3Q8IX30 MIR502-201ENST00000606349 86 ntBASIC1.75□□□□□ -2.13
SCUBE3Q8IX30 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
SCUBE3Q8IX30 RNU6-42P-201ENST00000384165 107 ntBASIC1.74□□□□□ -2.13
SCUBE3Q8IX30 RNA5SP484-201ENST00000458857 111 ntBASIC1.74□□□□□ -2.13
SCUBE3Q8IX30 AC021146.9-201ENST00000512503 156 ntBASIC1.74□□□□□ -2.13
SCUBE3Q8IX30 SCARNA16.5-201ENST00000517114 183 ntBASIC1.74□□□□□ -2.13
SCUBE3Q8IX30 U2.7-201ENST00000619197 100 ntBASIC1.74□□□□□ -2.13
SCUBE3Q8IX30 uc_338.10-201ENST00000621872 182 ntBASIC1.74□□□□□ -2.13
SCUBE3Q8IX30 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.74□□□□□ -2.13
SCUBE3Q8IX30 MIR758-201ENST00000390227 88 ntBASIC1.73□□□□□ -2.13
SCUBE3Q8IX30 RNA5SP480-201ENST00000516840 109 ntBASIC1.73□□□□□ -2.13
SCUBE3Q8IX30 MIR3612-201ENST00000579753 87 ntBASIC1.72□□□□□ -2.13
SCUBE3Q8IX30 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SCUBE3Q8IX30 RNU6-520P-201ENST00000384717 104 ntBASIC1.71□□□□□ -2.14
SCUBE3Q8IX30 AL162376.1-201ENST00000624117 175 ntBASIC1.71□□□□□ -2.14
SCUBE3Q8IX30 Y_RNA.125-201ENST00000363371 111 ntBASIC1.7□□□□□ -2.14
SCUBE3Q8IX30 MIR573-201ENST00000384964 99 ntBASIC1.7□□□□□ -2.14
SCUBE3Q8IX30 RNA5SP220-201ENST00000516298 104 ntBASIC1.7□□□□□ -2.14
SCUBE3Q8IX30 SCARNA17.3-201ENST00000516381 125 ntBASIC1.7□□□□□ -2.14
SCUBE3Q8IX30 MIR4452-201ENST00000583004 71 ntBASIC1.7□□□□□ -2.14
SCUBE3Q8IX30 U4.4-201ENST00000620626 117 ntBASIC1.7□□□□□ -2.14
SCUBE3Q8IX30 RNU6-1312P-201ENST00000362425 108 ntBASIC1.69□□□□□ -2.14
SCUBE3Q8IX30 RNA5SP327-201ENST00000362494 101 ntBASIC1.69□□□□□ -2.14
SCUBE3Q8IX30 SNORA33.1-201ENST00000364957 130 ntBASIC1.69□□□□□ -2.14
SCUBE3Q8IX30 Y_RNA.407-201ENST00000383986 113 ntBASIC1.69□□□□□ -2.14
SCUBE3Q8IX30 MIR652-201ENST00000385278 98 ntBASIC1.69□□□□□ -2.14
SCUBE3Q8IX30 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SCUBE3Q8IX30 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.68□□□□□ -2.14
SCUBE3Q8IX30 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.68□□□□□ -2.14
SCUBE3Q8IX30 MIR6828-201ENST00000636181 60 ntBASIC1.68□□□□□ -2.14
SCUBE3Q8IX30 SNORA63.6-201ENST00000364921 119 ntBASIC1.66□□□□□ -2.14
SCUBE3Q8IX30 MIR19B1-201ENST00000384829 87 ntBASIC1.66□□□□□ -2.14
SCUBE3Q8IX30 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.66□□□□□ -2.14
SCUBE3Q8IX30 MIR4285-201ENST00000581001 85 ntBASIC1.65□□□□□ -2.15
SCUBE3Q8IX30 AC025627.3-201ENST00000582078 182 ntBASIC1.65□□□□□ -2.15
SCUBE3Q8IX30 MIR6734-201ENST00000621166 68 ntBASIC1.65□□□□□ -2.15
SCUBE3Q8IX30 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.65□□□□□ -2.15
SCUBE3Q8IX30 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
SCUBE3Q8IX30 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
SCUBE3Q8IX30 MIR200A-201ENST00000384875 90 ntBASIC1.64□□□□□ -2.15
SCUBE3Q8IX30 MIR517C-201ENST00000385103 95 ntBASIC1.64□□□□□ -2.15
SCUBE3Q8IX30 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.64□□□□□ -2.15
SCUBE3Q8IX30 SNORD53B-201ENST00000577887 78 ntBASIC1.64□□□□□ -2.15
SCUBE3Q8IX30 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
SCUBE3Q8IX30 SNORD114-26-201ENST00000363543 72 ntBASIC1.63□□□□□ -2.15
SCUBE3Q8IX30 RNA5SP227-201ENST00000516184 113 ntBASIC1.63□□□□□ -2.15
SCUBE3Q8IX30 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.63□□□□□ -2.15
SCUBE3Q8IX30 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
SCUBE3Q8IX30 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
SCUBE3Q8IX30 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SCUBE3Q8IX30 Y_RNA.246-201ENST00000364495 108 ntBASIC1.62□□□□□ -2.15
SCUBE3Q8IX30 MIR1323-201ENST00000408090 73 ntBASIC1.62□□□□□ -2.15
SCUBE3Q8IX30 RNA5SP102-201ENST00000516865 106 ntBASIC1.62□□□□□ -2.15
SCUBE3Q8IX30 SNORD110-201ENST00000408189 75 ntBASIC1.61□□□□□ -2.15
SCUBE3Q8IX30 AC006210.1-201ENST00000424882 111 ntBASIC1.61□□□□□ -2.15
SCUBE3Q8IX30 RNU7-119P-201ENST00000459279 63 ntBASIC1.61□□□□□ -2.15
SCUBE3Q8IX30 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
SCUBE3Q8IX30 RNU1-42P-201ENST00000364033 160 ntBASIC1.6□□□□□ -2.15
SCUBE3Q8IX30 Y_RNA.325-201ENST00000365171 122 ntBASIC1.6□□□□□ -2.15
SCUBE3Q8IX30 MIR1304-201ENST00000408243 91 ntBASIC1.6□□□□□ -2.15
SCUBE3Q8IX30 SNORD124-201ENST00000459577 104 ntBASIC1.6□□□□□ -2.15
SCUBE3Q8IX30 MIR548AE1-201ENST00000583292 70 ntBASIC1.6□□□□□ -2.15
SCUBE3Q8IX30 MIR548AD-201ENST00000584780 82 ntBASIC1.6□□□□□ -2.15
SCUBE3Q8IX30 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.6□□□□□ -2.15
SCUBE3Q8IX30 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SCUBE3Q8IX30 SNORA25.8-201ENST00000364831 128 ntBASIC1.59□□□□□ -2.15
SCUBE3Q8IX30 MIR582-201ENST00000365731 98 ntBASIC1.59□□□□□ -2.15
SCUBE3Q8IX30 SNORA41B-201ENST00000384785 128 ntBASIC1.59□□□□□ -2.15
SCUBE3Q8IX30 CYP3A54P-201ENST00000566950 75 ntBASIC1.59□□□□□ -2.15
SCUBE3Q8IX30 Y_RNA.379-201ENST00000365653 102 ntBASIC1.58□□□□□ -2.16
SCUBE3Q8IX30 MIR548E-201ENST00000408287 88 ntBASIC1.58□□□□□ -2.16
SCUBE3Q8IX30 RNU4-88P-201ENST00000411220 86 ntBASIC1.58□□□□□ -2.16
SCUBE3Q8IX30 RNA5SP268-201ENST00000516828 124 ntBASIC1.58□□□□□ -2.16
SCUBE3Q8IX30 MIR4473-201ENST00000583731 91 ntBASIC1.58□□□□□ -2.16
SCUBE3Q8IX30 MIR18A-201ENST00000362310 71 ntBASIC1.57□□□□□ -2.16
SCUBE3Q8IX30 SNORA67.6-201ENST00000391093 99 ntBASIC1.57□□□□□ -2.16
SCUBE3Q8IX30 SNORA36.1-201ENST00000363424 132 ntBASIC1.56□□□□□ -2.16
SCUBE3Q8IX30 AL354695.1-201ENST00000427935 228 ntBASIC1.56□□□□□ -2.16
SCUBE3Q8IX30 U6.96-201ENST00000636425 70 ntBASIC1.56□□□□□ -2.16
SCUBE3Q8IX30 SNORD114-22-201ENST00000365423 72 ntBASIC1.55□□□□□ -2.16
SCUBE3Q8IX30 SNORA31.24-201ENST00000517232 57 ntBASIC1.55□□□□□ -2.16
SCUBE3Q8IX30 MIR4421-201ENST00000578133 69 ntBASIC1.55□□□□□ -2.16
SCUBE3Q8IX30 MIR6779-201ENST00000617283 64 ntBASIC1.55□□□□□ -2.16
SCUBE3Q8IX30 SNORA9.1-201ENST00000362412 131 ntBASIC1.54□□□□□ -2.16
SCUBE3Q8IX30 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SCUBE3Q8IX30 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.54□□□□□ -2.16
SCUBE3Q8IX30 RNA5SP325-201ENST00000363756 130 ntBASIC1.53□□□□□ -2.16
SCUBE3Q8IX30 RNU6-753P-201ENST00000363926 107 ntBASIC1.53□□□□□ -2.16
SCUBE3Q8IX30 SNORD114-24-201ENST00000365029 72 ntBASIC1.53□□□□□ -2.16
SCUBE3Q8IX30 RNU4-45P-201ENST00000365469 141 ntBASIC1.53□□□□□ -2.16
SCUBE3Q8IX30 MIR320A-201ENST00000385302 82 ntBASIC1.53□□□□□ -2.16
SCUBE3Q8IX30 AL021921.1-201ENST00000442774 93 ntBASIC1.53□□□□□ -2.16
SCUBE3Q8IX30 AC011195.1-201ENST00000578177 177 ntBASIC1.53□□□□□ -2.16
SCUBE3Q8IX30 AC022709.1-201ENST00000615967 87 ntBASIC1.53□□□□□ -2.16
SCUBE3Q8IX30 MIR516B1-201ENST00000385211 90 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 232.8 ms