Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 SNORD45B-201ENST00000364617 72 ntBASIC-0.78□□□□□ -2.53
PRPF39Q86UA1 SNORD4B-201ENST00000459083 72 ntBASIC-0.78□□□□□ -2.53
PRPF39Q86UA1 MIR3179-1-201ENST00000578940 84 ntBASIC-0.78□□□□□ -2.53
PRPF39Q86UA1 MIR3179-2-201ENST00000579107 84 ntBASIC-0.78□□□□□ -2.53
PRPF39Q86UA1 MIR3179-3-201ENST00000579566 84 ntBASIC-0.78□□□□□ -2.53
PRPF39Q86UA1 MIR4777-201ENST00000583710 86 ntBASIC-0.78□□□□□ -2.53
PRPF39Q86UA1 MIR3179-4-201ENST00000617599 84 ntBASIC-0.78□□□□□ -2.53
PRPF39Q86UA1 AC090617.8-201ENST00000623339 167 ntBASIC-0.78□□□□□ -2.53
PRPF39Q86UA1 SNORD75.1-201ENST00000408373 60 ntBASIC-0.79□□□□□ -2.54
PRPF39Q86UA1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.79□□□□□ -2.54
PRPF39Q86UA1 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.79□□□□□ -2.54
PRPF39Q86UA1 MIR5009-201ENST00000578736 100 ntBASIC-0.79□□□□□ -2.54
PRPF39Q86UA1 MIR4439-201ENST00000583746 80 ntBASIC-0.79□□□□□ -2.54
PRPF39Q86UA1 AC104996.3-201ENST00000590718 94 ntBASIC-0.79□□□□□ -2.54
PRPF39Q86UA1 MIR6854-201ENST00000614935 69 ntBASIC-0.79□□□□□ -2.54
PRPF39Q86UA1 AC012531.4-201ENST00000616509 177 ntBASIC-0.79□□□□□ -2.54
PRPF39Q86UA1 RNU6-813P-201ENST00000384691 107 ntBASIC-0.8□□□□□ -2.54
PRPF39Q86UA1 MIR518B-201ENST00000385127 83 ntBASIC-0.8□□□□□ -2.54
PRPF39Q86UA1 MIRLET7B-201ENST00000385140 83 ntBASIC-0.8□□□□□ -2.54
PRPF39Q86UA1 MIR548A3-201ENST00000385297 97 ntBASIC-0.8□□□□□ -2.54
PRPF39Q86UA1 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.8□□□□□ -2.54
PRPF39Q86UA1 RNU6-592P-201ENST00000411333 103 ntBASIC-0.8□□□□□ -2.54
PRPF39Q86UA1 SNORD2-201ENST00000459163 69 ntBASIC-0.8□□□□□ -2.54
PRPF39Q86UA1 AC021146.6-201ENST00000514659 117 ntBASIC-0.8□□□□□ -2.54
PRPF39Q86UA1 RNU6-255P-201ENST00000516957 105 ntBASIC-0.8□□□□□ -2.54
PRPF39Q86UA1 SNORA63.6-201ENST00000364921 119 ntBASIC-0.81□□□□□ -2.54
PRPF39Q86UA1 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.81□□□□□ -2.54
PRPF39Q86UA1 RNY1P5-201ENST00000383890 115 ntBASIC-0.81□□□□□ -2.54
PRPF39Q86UA1 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.81□□□□□ -2.54
PRPF39Q86UA1 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.81□□□□□ -2.54
PRPF39Q86UA1 MIR517B-201ENST00000385102 67 ntBASIC-0.81□□□□□ -2.54
PRPF39Q86UA1 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.81□□□□□ -2.54
PRPF39Q86UA1 RNU6-644P-201ENST00000391155 98 ntBASIC-0.81□□□□□ -2.54
PRPF39Q86UA1 SNORA19.1-201ENST00000410656 129 ntBASIC-0.81□□□□□ -2.54
PRPF39Q86UA1 RNU6-881P-201ENST00000516813 102 ntBASIC-0.81□□□□□ -2.54
PRPF39Q86UA1 RNU6-794P-201ENST00000517261 64 ntBASIC-0.81□□□□□ -2.54
PRPF39Q86UA1 RNU6-30P-201ENST00000384561 107 ntBASIC-0.82□□□□□ -2.54
PRPF39Q86UA1 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.82□□□□□ -2.54
PRPF39Q86UA1 AP000533.3-201ENST00000447704 118 ntBASIC-0.82□□□□□ -2.54
PRPF39Q86UA1 U6.95-201ENST00000636931 70 ntBASIC-0.82□□□□□ -2.54
PRPF39Q86UA1 MIR3914-2-201ENST00000637339 95 ntBASIC-0.82□□□□□ -2.54
PRPF39Q86UA1 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.83□□□□□ -2.54
PRPF39Q86UA1 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.83□□□□□ -2.54
PRPF39Q86UA1 SNORD115-23-201ENST00000364461 82 ntBASIC-0.83□□□□□ -2.54
PRPF39Q86UA1 RNU6-80P-201ENST00000384195 107 ntBASIC-0.83□□□□□ -2.54
PRPF39Q86UA1 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.83□□□□□ -2.54
PRPF39Q86UA1 MIR548U-201ENST00000390728 81 ntBASIC-0.83□□□□□ -2.54
PRPF39Q86UA1 RNU6-907P-201ENST00000390924 102 ntBASIC-0.83□□□□□ -2.54
PRPF39Q86UA1 SNORA18.5-201ENST00000516616 101 ntBASIC-0.83□□□□□ -2.54
PRPF39Q86UA1 SNORD114-25-201ENST00000363742 72 ntBASIC-0.84□□□□□ -2.54
PRPF39Q86UA1 AC022137.1-201ENST00000483735 151 ntBASIC-0.84□□□□□ -2.54
PRPF39Q86UA1 AC021146.9-201ENST00000512503 156 ntBASIC-0.84□□□□□ -2.54
PRPF39Q86UA1 snoR1.1-201ENST00000628177 80 ntBASIC-0.84□□□□□ -2.54
PRPF39Q86UA1 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.85□□□□□ -2.55
PRPF39Q86UA1 RNU4-36P-201ENST00000364294 144 ntBASIC-0.85□□□□□ -2.55
PRPF39Q86UA1 RNU6-382P-201ENST00000365181 106 ntBASIC-0.85□□□□□ -2.55
PRPF39Q86UA1 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.85□□□□□ -2.55
PRPF39Q86UA1 RNU6-519P-201ENST00000410590 108 ntBASIC-0.85□□□□□ -2.55
PRPF39Q86UA1 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.86□□□□□ -2.55
PRPF39Q86UA1 MIR203A-201ENST00000384836 110 ntBASIC-0.86□□□□□ -2.55
PRPF39Q86UA1 SNORD75.2-201ENST00000408784 58 ntBASIC-0.86□□□□□ -2.55
PRPF39Q86UA1 snoU13.17-201ENST00000458802 104 ntBASIC-0.86□□□□□ -2.55
PRPF39Q86UA1 RNA5SP147-201ENST00000516493 109 ntBASIC-0.86□□□□□ -2.55
PRPF39Q86UA1 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.86□□□□□ -2.55
PRPF39Q86UA1 RNU4-32P-201ENST00000363404 141 ntBASIC-0.87□□□□□ -2.55
PRPF39Q86UA1 MIR124-2-201ENST00000385081 109 ntBASIC-0.87□□□□□ -2.55
PRPF39Q86UA1 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.87□□□□□ -2.55
PRPF39Q86UA1 RNU6-824P-201ENST00000363724 104 ntBASIC-0.88□□□□□ -2.55
PRPF39Q86UA1 SNORA13-201ENST00000458790 133 ntBASIC-0.88□□□□□ -2.55
PRPF39Q86UA1 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.88□□□□□ -2.55
PRPF39Q86UA1 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.88□□□□□ -2.55
PRPF39Q86UA1 RNU6-659P-201ENST00000516454 104 ntBASIC-0.88□□□□□ -2.55
PRPF39Q86UA1 AC026421.1-201ENST00000519101 163 ntBASIC-0.88□□□□□ -2.55
PRPF39Q86UA1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.88□□□□□ -2.55
PRPF39Q86UA1 U6.96-201ENST00000636425 70 ntBASIC-0.88□□□□□ -2.55
PRPF39Q86UA1 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.89□□□□□ -2.55
PRPF39Q86UA1 MIR548I1-201ENST00000408810 149 ntBASIC-0.89□□□□□ -2.55
PRPF39Q86UA1 RNU7-24P-201ENST00000458867 62 ntBASIC-0.89□□□□□ -2.55
PRPF39Q86UA1 MIR4464-201ENST00000580818 92 ntBASIC-0.89□□□□□ -2.55
PRPF39Q86UA1 MIR4773-1-201ENST00000637203 78 ntBASIC-0.89□□□□□ -2.55
PRPF39Q86UA1 MIR196A1-201ENST00000388006 70 ntBASIC-0.9□□□□□ -2.55
PRPF39Q86UA1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.9□□□□□ -2.55
PRPF39Q86UA1 AL500527.2-201ENST00000454105 95 ntBASIC-0.9□□□□□ -2.55
PRPF39Q86UA1 RNU6-62P-201ENST00000516526 102 ntBASIC-0.9□□□□□ -2.55
PRPF39Q86UA1 RNU6-208P-201ENST00000362431 107 ntBASIC-0.91□□□□□ -2.56
PRPF39Q86UA1 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.91□□□□□ -2.56
PRPF39Q86UA1 SNORA33.1-201ENST00000364957 130 ntBASIC-0.91□□□□□ -2.56
PRPF39Q86UA1 SNORD58A-201ENST00000383875 65 ntBASIC-0.91□□□□□ -2.56
PRPF39Q86UA1 SNORD18.2-201ENST00000459604 70 ntBASIC-0.91□□□□□ -2.56
PRPF39Q86UA1 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.92□□□□□ -2.56
PRPF39Q86UA1 RNU6-431P-201ENST00000383874 107 ntBASIC-0.92□□□□□ -2.56
PRPF39Q86UA1 RNU6-260P-201ENST00000384092 107 ntBASIC-0.92□□□□□ -2.56
PRPF39Q86UA1 RNU4-63P-201ENST00000411313 118 ntBASIC-0.92□□□□□ -2.56
PRPF39Q86UA1 YWHAEP3-201ENST00000582767 121 ntBASIC-0.92□□□□□ -2.56
PRPF39Q86UA1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.92□□□□□ -2.56
PRPF39Q86UA1 SNORD74.6-201ENST00000364796 70 ntBASIC-0.93□□□□□ -2.56
PRPF39Q86UA1 MT-TQ-201ENST00000387372 72 ntBASIC-0.93□□□□□ -2.56
PRPF39Q86UA1 MTATP6P29-201ENST00000415057 132 ntBASIC-0.93□□□□□ -2.56
PRPF39Q86UA1 RNU6-904P-201ENST00000516206 101 ntBASIC-0.93□□□□□ -2.56
PRPF39Q86UA1 RNU6-412P-201ENST00000516434 106 ntBASIC-0.93□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 2681.9 ms