Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 MIR4439-201ENST00000583746 80 ntBASIC-0.41□□□□□ -2.48
TNFRSF9Q07011 MIR6773-201ENST00000612812 74 ntBASIC-0.41□□□□□ -2.48
TNFRSF9Q07011 AC012531.4-201ENST00000616509 177 ntBASIC-0.41□□□□□ -2.48
TNFRSF9Q07011 SNORD114-14-201ENST00000362723 75 ntBASIC-0.42□□□□□ -2.48
TNFRSF9Q07011 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.42□□□□□ -2.48
TNFRSF9Q07011 SNORD45B-201ENST00000364617 72 ntBASIC-0.42□□□□□ -2.48
TNFRSF9Q07011 RNU6-973P-201ENST00000364690 107 ntBASIC-0.42□□□□□ -2.48
TNFRSF9Q07011 RNY1P5-201ENST00000383890 115 ntBASIC-0.42□□□□□ -2.48
TNFRSF9Q07011 RNU6-80P-201ENST00000384195 107 ntBASIC-0.42□□□□□ -2.48
TNFRSF9Q07011 RNU6-813P-201ENST00000384691 107 ntBASIC-0.42□□□□□ -2.48
TNFRSF9Q07011 MIR204-201ENST00000385200 110 ntBASIC-0.42□□□□□ -2.48
TNFRSF9Q07011 RNU6-907P-201ENST00000390924 102 ntBASIC-0.42□□□□□ -2.48
TNFRSF9Q07011 SNORD22.1-201ENST00000516331 125 ntBASIC-0.42□□□□□ -2.48
TNFRSF9Q07011 RNU6-659P-201ENST00000516454 104 ntBASIC-0.42□□□□□ -2.48
TNFRSF9Q07011 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.42□□□□□ -2.48
TNFRSF9Q07011 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.43□□□□□ -2.48
TNFRSF9Q07011 SNORD114-4-201ENST00000363962 75 ntBASIC-0.43□□□□□ -2.48
TNFRSF9Q07011 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.43□□□□□ -2.48
TNFRSF9Q07011 SNORD115-23-201ENST00000364461 82 ntBASIC-0.43□□□□□ -2.48
TNFRSF9Q07011 RNY4P3-201ENST00000365254 95 ntBASIC-0.43□□□□□ -2.48
TNFRSF9Q07011 MIRLET7B-201ENST00000385140 83 ntBASIC-0.43□□□□□ -2.48
TNFRSF9Q07011 MIR548A3-201ENST00000385297 97 ntBASIC-0.43□□□□□ -2.48
TNFRSF9Q07011 RNU6-644P-201ENST00000391155 98 ntBASIC-0.43□□□□□ -2.48
TNFRSF9Q07011 snoU13.17-201ENST00000458802 104 ntBASIC-0.43□□□□□ -2.48
TNFRSF9Q07011 AC104996.3-201ENST00000590718 94 ntBASIC-0.43□□□□□ -2.48
TNFRSF9Q07011 MIR6854-201ENST00000614935 69 ntBASIC-0.43□□□□□ -2.48
TNFRSF9Q07011 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.44□□□□□ -2.48
TNFRSF9Q07011 SNORA63.2-201ENST00000362603 126 ntBASIC-0.44□□□□□ -2.48
TNFRSF9Q07011 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.44□□□□□ -2.48
TNFRSF9Q07011 MIR517B-201ENST00000385102 67 ntBASIC-0.44□□□□□ -2.48
TNFRSF9Q07011 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.44□□□□□ -2.48
TNFRSF9Q07011 MIR3179-1-201ENST00000578940 84 ntBASIC-0.44□□□□□ -2.48
TNFRSF9Q07011 MIR3179-2-201ENST00000579107 84 ntBASIC-0.44□□□□□ -2.48
TNFRSF9Q07011 MIR3179-3-201ENST00000579566 84 ntBASIC-0.44□□□□□ -2.48
TNFRSF9Q07011 MIR3179-4-201ENST00000617599 84 ntBASIC-0.44□□□□□ -2.48
TNFRSF9Q07011 SNORD114-25-201ENST00000363742 72 ntBASIC-0.45□□□□□ -2.48
TNFRSF9Q07011 SNORD114-15-201ENST00000364687 72 ntBASIC-0.45□□□□□ -2.48
TNFRSF9Q07011 RNU6-382P-201ENST00000365181 106 ntBASIC-0.45□□□□□ -2.48
TNFRSF9Q07011 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.45□□□□□ -2.48
TNFRSF9Q07011 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.45□□□□□ -2.48
TNFRSF9Q07011 MIR203A-201ENST00000384836 110 ntBASIC-0.45□□□□□ -2.48
TNFRSF9Q07011 MIR518B-201ENST00000385127 83 ntBASIC-0.45□□□□□ -2.48
TNFRSF9Q07011 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.45□□□□□ -2.48
TNFRSF9Q07011 AP000533.3-201ENST00000447704 118 ntBASIC-0.45□□□□□ -2.48
TNFRSF9Q07011 AL500527.2-201ENST00000454105 95 ntBASIC-0.45□□□□□ -2.48
TNFRSF9Q07011 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.45□□□□□ -2.48
TNFRSF9Q07011 SNORA18.5-201ENST00000516616 101 ntBASIC-0.45□□□□□ -2.48
TNFRSF9Q07011 MIR4464-201ENST00000580818 92 ntBASIC-0.45□□□□□ -2.48
TNFRSF9Q07011 U6.95-201ENST00000636931 70 ntBASIC-0.45□□□□□ -2.48
TNFRSF9Q07011 RNU6-824P-201ENST00000363724 104 ntBASIC-0.46□□□□□ -2.48
TNFRSF9Q07011 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.46□□□□□ -2.48
TNFRSF9Q07011 SNORA63.6-201ENST00000364921 119 ntBASIC-0.46□□□□□ -2.48
TNFRSF9Q07011 MIR548U-201ENST00000390728 81 ntBASIC-0.46□□□□□ -2.48
TNFRSF9Q07011 snoU13.19-201ENST00000459148 104 ntBASIC-0.46□□□□□ -2.48
TNFRSF9Q07011 SNORD2-201ENST00000459163 69 ntBASIC-0.46□□□□□ -2.48
TNFRSF9Q07011 RNA5SP147-201ENST00000516493 109 ntBASIC-0.46□□□□□ -2.48
TNFRSF9Q07011 RNU6-881P-201ENST00000516813 102 ntBASIC-0.46□□□□□ -2.48
TNFRSF9Q07011 AC026421.1-201ENST00000519101 163 ntBASIC-0.46□□□□□ -2.48
TNFRSF9Q07011 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.47□□□□□ -2.48
TNFRSF9Q07011 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.47□□□□□ -2.48
TNFRSF9Q07011 RNU4-36P-201ENST00000364294 144 ntBASIC-0.47□□□□□ -2.48
TNFRSF9Q07011 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.47□□□□□ -2.48
TNFRSF9Q07011 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.47□□□□□ -2.48
TNFRSF9Q07011 RNU6-519P-201ENST00000410590 108 ntBASIC-0.47□□□□□ -2.48
TNFRSF9Q07011 RNU6-431P-201ENST00000383874 107 ntBASIC-0.48□□□□□ -2.49
TNFRSF9Q07011 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.48□□□□□ -2.49
TNFRSF9Q07011 MIR224-201ENST00000384889 81 ntBASIC-0.48□□□□□ -2.49
TNFRSF9Q07011 MIR124-2-201ENST00000385081 109 ntBASIC-0.48□□□□□ -2.49
TNFRSF9Q07011 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
TNFRSF9Q07011 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.48□□□□□ -2.49
TNFRSF9Q07011 SNORD75.2-201ENST00000408784 58 ntBASIC-0.48□□□□□ -2.49
TNFRSF9Q07011 AC022137.1-201ENST00000483735 151 ntBASIC-0.48□□□□□ -2.49
TNFRSF9Q07011 AC021146.9-201ENST00000512503 156 ntBASIC-0.48□□□□□ -2.49
TNFRSF9Q07011 MIR3681-201ENST00000580089 72 ntBASIC-0.48□□□□□ -2.49
TNFRSF9Q07011 MIR6888-201ENST00000621977 67 ntBASIC-0.48□□□□□ -2.49
TNFRSF9Q07011 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.48□□□□□ -2.49
TNFRSF9Q07011 RNU4-32P-201ENST00000363404 141 ntBASIC-0.49□□□□□ -2.49
TNFRSF9Q07011 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.49□□□□□ -2.49
TNFRSF9Q07011 SNORA33.1-201ENST00000364957 130 ntBASIC-0.49□□□□□ -2.49
TNFRSF9Q07011 SNORD58A-201ENST00000383875 65 ntBASIC-0.49□□□□□ -2.49
TNFRSF9Q07011 MIR196A1-201ENST00000388006 70 ntBASIC-0.49□□□□□ -2.49
TNFRSF9Q07011 RNU7-24P-201ENST00000458867 62 ntBASIC-0.49□□□□□ -2.49
TNFRSF9Q07011 AC021146.6-201ENST00000514659 117 ntBASIC-0.49□□□□□ -2.49
TNFRSF9Q07011 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.49□□□□□ -2.49
TNFRSF9Q07011 RNU7-153P-201ENST00000516455 62 ntBASIC-0.49□□□□□ -2.49
TNFRSF9Q07011 RNU6-537P-201ENST00000517277 103 ntBASIC-0.49□□□□□ -2.49
TNFRSF9Q07011 MIR3133-201ENST00000583157 78 ntBASIC-0.49□□□□□ -2.49
TNFRSF9Q07011 RNU6-208P-201ENST00000362431 107 ntBASIC-0.5□□□□□ -2.49
TNFRSF9Q07011 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.5□□□□□ -2.49
TNFRSF9Q07011 RNU6-774P-201ENST00000363238 107 ntBASIC-0.5□□□□□ -2.49
TNFRSF9Q07011 RNU6-260P-201ENST00000384092 107 ntBASIC-0.5□□□□□ -2.49
TNFRSF9Q07011 SNORD116-21-201ENST00000384507 92 ntBASIC-0.5□□□□□ -2.49
TNFRSF9Q07011 SNORD64-201ENST00000386683 67 ntBASIC-0.5□□□□□ -2.49
TNFRSF9Q07011 MIR548I1-201ENST00000408810 149 ntBASIC-0.5□□□□□ -2.49
TNFRSF9Q07011 SCARNA23-201ENST00000516060 130 ntBASIC-0.5□□□□□ -2.49
TNFRSF9Q07011 RNU6-904P-201ENST00000516206 101 ntBASIC-0.5□□□□□ -2.49
TNFRSF9Q07011 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.5□□□□□ -2.49
TNFRSF9Q07011 YWHAEP3-201ENST00000582767 121 ntBASIC-0.5□□□□□ -2.49
TNFRSF9Q07011 MIR4773-1-201ENST00000637203 78 ntBASIC-0.5□□□□□ -2.49
TNFRSF9Q07011 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms