Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
USP46P62068 SNORA36.1-201ENST00000363424 132 ntBASIC1.52□□□□□ -2.17
USP46P62068 SNORA25.5-201ENST00000363782 126 ntBASIC1.52□□□□□ -2.17
USP46P62068 RNA5SP192-201ENST00000364404 120 ntBASIC1.52□□□□□ -2.17
USP46P62068 MIR618-201ENST00000385287 98 ntBASIC1.52□□□□□ -2.17
USP46P62068 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
USP46P62068 AC021146.9-201ENST00000512503 156 ntBASIC1.52□□□□□ -2.17
USP46P62068 TRMT112P2-201ENST00000512910 132 ntBASIC1.52□□□□□ -2.17
USP46P62068 SCARNA21.1-201ENST00000515996 128 ntBASIC1.52□□□□□ -2.17
USP46P62068 RNA5SP215-201ENST00000363440 122 ntBASIC1.51□□□□□ -2.17
USP46P62068 Y_RNA.250-201ENST00000364542 110 ntBASIC1.51□□□□□ -2.17
USP46P62068 MIR320A-201ENST00000385302 82 ntBASIC1.51□□□□□ -2.17
USP46P62068 MIR1287-201ENST00000408492 90 ntBASIC1.51□□□□□ -2.17
USP46P62068 RNA5SP222-201ENST00000411039 105 ntBASIC1.51□□□□□ -2.17
USP46P62068 AL157398.1-201ENST00000452981 186 ntBASIC1.51□□□□□ -2.17
USP46P62068 RPS29P23-201ENST00000458635 123 ntBASIC1.51□□□□□ -2.17
USP46P62068 MIR7974-201ENST00000615835 79 ntBASIC1.51□□□□□ -2.17
USP46P62068 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
USP46P62068 Y_RNA.407-201ENST00000383986 113 ntBASIC1.5□□□□□ -2.17
USP46P62068 MIR4421-201ENST00000578133 69 ntBASIC1.5□□□□□ -2.17
USP46P62068 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
USP46P62068 RNU1-124P-201ENST00000363861 145 ntBASIC1.49□□□□□ -2.17
USP46P62068 SNORD110-201ENST00000408189 75 ntBASIC1.49□□□□□ -2.17
USP46P62068 RNA5SP94-201ENST00000516917 108 ntBASIC1.49□□□□□ -2.17
USP46P62068 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
USP46P62068 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
USP46P62068 MIR521-2-201ENST00000384818 87 ntBASIC1.48□□□□□ -2.17
USP46P62068 MIR652-201ENST00000385278 98 ntBASIC1.48□□□□□ -2.17
USP46P62068 MIR466-201ENST00000580653 84 ntBASIC1.48□□□□□ -2.17
USP46P62068 RNU6-302P-201ENST00000365249 107 ntBASIC1.47□□□□□ -2.17
USP46P62068 RNU4-45P-201ENST00000365469 141 ntBASIC1.47□□□□□ -2.17
USP46P62068 RNU6-614P-201ENST00000384369 107 ntBASIC1.47□□□□□ -2.17
USP46P62068 MIR758-201ENST00000390227 88 ntBASIC1.47□□□□□ -2.17
USP46P62068 RNU6-955P-201ENST00000410497 104 ntBASIC1.47□□□□□ -2.17
USP46P62068 AC079150.2-201ENST00000443733 78 ntBASIC1.47□□□□□ -2.17
USP46P62068 SCARNA17.3-201ENST00000516381 125 ntBASIC1.47□□□□□ -2.17
USP46P62068 MIR7107-201ENST00000611489 80 ntBASIC1.47□□□□□ -2.17
USP46P62068 U6.59-201ENST00000615686 107 ntBASIC1.47□□□□□ -2.17
USP46P62068 RNU6-940P-201ENST00000363433 104 ntBASIC1.46□□□□□ -2.18
USP46P62068 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.46□□□□□ -2.18
USP46P62068 MIR548AE1-201ENST00000583292 70 ntBASIC1.46□□□□□ -2.18
USP46P62068 MIR8070-201ENST00000616510 88 ntBASIC1.45□□□□□ -2.18
USP46P62068 RNU6-1079P-201ENST00000362861 110 ntBASIC1.44□□□□□ -2.18
USP46P62068 MIR150-201ENST00000385048 84 ntBASIC1.44□□□□□ -2.18
USP46P62068 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
USP46P62068 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
USP46P62068 MIR499A-201ENST00000384903 122 ntBASIC1.43□□□□□ -2.18
USP46P62068 MIR630-201ENST00000384957 97 ntBASIC1.43□□□□□ -2.18
USP46P62068 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.43□□□□□ -2.18
USP46P62068 MIR4752-201ENST00000579672 72 ntBASIC1.43□□□□□ -2.18
USP46P62068 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.43□□□□□ -2.18
USP46P62068 SNORA63.6-201ENST00000364921 119 ntBASIC1.42□□□□□ -2.18
USP46P62068 Y_RNA.327-201ENST00000365201 102 ntBASIC1.42□□□□□ -2.18
USP46P62068 SNORA15B-2-201ENST00000384058 135 ntBASIC1.42□□□□□ -2.18
USP46P62068 SNORA15B-1-201ENST00000384334 135 ntBASIC1.42□□□□□ -2.18
USP46P62068 SNORA33.1-201ENST00000364957 130 ntBASIC1.41□□□□□ -2.18
USP46P62068 SNORA36.2-201ENST00000384004 127 ntBASIC1.41□□□□□ -2.18
USP46P62068 SNORA70.25-201ENST00000612741 95 ntBASIC1.41□□□□□ -2.18
USP46P62068 AL353770.2-201ENST00000620024 78 ntBASIC1.41□□□□□ -2.18
USP46P62068 RNU6-92P-201ENST00000605893 104 ntBASIC1.4□□□□□ -2.19
USP46P62068 uc_338.10-201ENST00000621872 182 ntBASIC1.4□□□□□ -2.19
USP46P62068 RNU6-829P-201ENST00000363700 112 ntBASIC1.39□□□□□ -2.19
USP46P62068 MIR582-201ENST00000365731 98 ntBASIC1.39□□□□□ -2.19
USP46P62068 MIR7111-201ENST00000619751 72 ntBASIC1.39□□□□□ -2.19
USP46P62068 RNU6-392P-201ENST00000364926 101 ntBASIC1.38□□□□□ -2.19
USP46P62068 RNY1P8-201ENST00000383970 114 ntBASIC1.38□□□□□ -2.19
USP46P62068 MIR517B-201ENST00000385102 67 ntBASIC1.38□□□□□ -2.19
USP46P62068 SNORA75.1-201ENST00000391130 148 ntBASIC1.38□□□□□ -2.19
USP46P62068 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.38□□□□□ -2.19
USP46P62068 MIR3660-201ENST00000584845 100 ntBASIC1.38□□□□□ -2.19
USP46P62068 AL353765.1-201ENST00000605514 183 ntBASIC1.38□□□□□ -2.19
USP46P62068 MIR548E-201ENST00000408287 88 ntBASIC1.37□□□□□ -2.19
USP46P62068 Y_RNA.633-201ENST00000459107 95 ntBASIC1.37□□□□□ -2.19
USP46P62068 Y_RNA.125-201ENST00000363371 111 ntBASIC1.36□□□□□ -2.19
USP46P62068 U2.7-201ENST00000619197 100 ntBASIC1.36□□□□□ -2.19
USP46P62068 Y_RNA.118-201ENST00000363300 101 ntBASIC1.35□□□□□ -2.19
USP46P62068 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
USP46P62068 SNORD113-2-201ENST00000391082 72 ntBASIC1.34□□□□□ -2.19
USP46P62068 RNU6-122P-201ENST00000516818 107 ntBASIC1.34□□□□□ -2.19
USP46P62068 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
USP46P62068 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
USP46P62068 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
USP46P62068 Y_RNA.355-201ENST00000365462 98 ntBASIC1.33□□□□□ -2.2
USP46P62068 RNU6-141P-201ENST00000410499 105 ntBASIC1.33□□□□□ -2.2
USP46P62068 U6.96-201ENST00000636425 70 ntBASIC1.33□□□□□ -2.2
USP46P62068 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.32□□□□□ -2.2
USP46P62068 SNORD60.1-201ENST00000362451 73 ntBASIC1.32□□□□□ -2.2
USP46P62068 Y_RNA.224-201ENST00000364308 111 ntBASIC1.32□□□□□ -2.2
USP46P62068 RNA5SP517-201ENST00000364724 117 ntBASIC1.32□□□□□ -2.2
USP46P62068 RNU6-698P-201ENST00000363523 107 ntBASIC1.31□□□□□ -2.2
USP46P62068 RNU6-34P-201ENST00000364874 107 ntBASIC1.31□□□□□ -2.2
USP46P62068 AC069271.1-201ENST00000445577 156 ntBASIC1.31□□□□□ -2.2
USP46P62068 RNU7-174P-201ENST00000516248 59 ntBASIC1.31□□□□□ -2.2
USP46P62068 SNORA25.18-201ENST00000607153 114 ntBASIC1.31□□□□□ -2.2
USP46P62068 Y_RNA.236-201ENST00000364427 111 ntBASIC1.3□□□□□ -2.2
USP46P62068 MIR1276-201ENST00000408707 83 ntBASIC1.3□□□□□ -2.2
USP46P62068 HMGN2P22-201ENST00000427588 175 ntBASIC1.3□□□□□ -2.2
USP46P62068 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.3□□□□□ -2.2
USP46P62068 MIR3938-201ENST00000582157 103 ntBASIC1.3□□□□□ -2.2
USP46P62068 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 245 ms