Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.08□□□□□ -2.42
LBX1P52954 MIR216B-201ENST00000390186 82 ntBASIC-0.08□□□□□ -2.42
LBX1P52954 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.08□□□□□ -2.42
LBX1P52954 RNU6-132P-201ENST00000383863 107 ntBASIC-0.09□□□□□ -2.42
LBX1P52954 SNORA19-201ENST00000384737 128 ntBASIC-0.09□□□□□ -2.42
LBX1P52954 MIR590-201ENST00000385008 97 ntBASIC-0.09□□□□□ -2.42
LBX1P52954 SNORD4B-201ENST00000459083 72 ntBASIC-0.09□□□□□ -2.42
LBX1P52954 CR383656.4-201ENST00000546909 122 ntBASIC-0.09□□□□□ -2.42
LBX1P52954 MIR4473-201ENST00000583731 91 ntBASIC-0.09□□□□□ -2.42
LBX1P52954 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.09□□□□□ -2.42
LBX1P52954 RNY4P7-201ENST00000364600 96 ntBASIC-0.1□□□□□ -2.43
LBX1P52954 RNU6-929P-201ENST00000384429 107 ntBASIC-0.1□□□□□ -2.43
LBX1P52954 MIR106A-201ENST00000384870 81 ntBASIC-0.1□□□□□ -2.43
LBX1P52954 MIR516B1-201ENST00000385211 90 ntBASIC-0.1□□□□□ -2.43
LBX1P52954 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
LBX1P52954 RNU7-159P-201ENST00000459284 62 ntBASIC-0.1□□□□□ -2.43
LBX1P52954 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.1□□□□□ -2.43
LBX1P52954 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.1□□□□□ -2.43
LBX1P52954 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.1□□□□□ -2.43
LBX1P52954 RNU6-158P-201ENST00000517104 100 ntBASIC-0.1□□□□□ -2.43
LBX1P52954 MIR451A-201ENST00000385059 72 ntBASIC-0.11□□□□□ -2.43
LBX1P52954 SNORD75.1-201ENST00000408373 60 ntBASIC-0.11□□□□□ -2.43
LBX1P52954 RNU6-887P-201ENST00000410660 100 ntBASIC-0.11□□□□□ -2.43
LBX1P52954 MIR3064-201ENST00000581130 66 ntBASIC-0.11□□□□□ -2.43
LBX1P52954 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.12□□□□□ -2.43
LBX1P52954 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.12□□□□□ -2.43
LBX1P52954 RNU6-972P-201ENST00000391208 107 ntBASIC-0.12□□□□□ -2.43
LBX1P52954 U3.27-201ENST00000391237 200 ntBASIC-0.12□□□□□ -2.43
LBX1P52954 MIR1302-5-201ENST00000408164 150 ntBASIC-0.12□□□□□ -2.43
LBX1P52954 RNA5SP163-201ENST00000410304 99 ntBASIC-0.12□□□□□ -2.43
LBX1P52954 RNU6-65P-201ENST00000516332 98 ntBASIC-0.12□□□□□ -2.43
LBX1P52954 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.12□□□□□ -2.43
LBX1P52954 RNU6-175P-201ENST00000516896 107 ntBASIC-0.12□□□□□ -2.43
LBX1P52954 RNU6-766P-201ENST00000362478 107 ntBASIC-0.13□□□□□ -2.43
LBX1P52954 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.13□□□□□ -2.43
LBX1P52954 SNORD58A-201ENST00000383875 65 ntBASIC-0.13□□□□□ -2.43
LBX1P52954 RNU6-10P-201ENST00000384036 107 ntBASIC-0.13□□□□□ -2.43
LBX1P52954 SNORA24B-201ENST00000384176 131 ntBASIC-0.13□□□□□ -2.43
LBX1P52954 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.13□□□□□ -2.43
LBX1P52954 RNU7-188P-201ENST00000517063 64 ntBASIC-0.13□□□□□ -2.43
LBX1P52954 MIR4536-1-201ENST00000583537 88 ntBASIC-0.13□□□□□ -2.43
LBX1P52954 AC104996.3-201ENST00000590718 94 ntBASIC-0.13□□□□□ -2.43
LBX1P52954 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.13□□□□□ -2.43
LBX1P52954 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.13□□□□□ -2.43
LBX1P52954 AC084368.1-201ENST00000620935 65 ntBASIC-0.13□□□□□ -2.43
LBX1P52954 MIR6514-201ENST00000622549 70 ntBASIC-0.13□□□□□ -2.43
LBX1P52954 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.14□□□□□ -2.43
LBX1P52954 RNU6-755P-201ENST00000364400 103 ntBASIC-0.14□□□□□ -2.43
LBX1P52954 RNY4P18-201ENST00000391107 89 ntBASIC-0.14□□□□□ -2.43
LBX1P52954 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.14□□□□□ -2.43
LBX1P52954 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.14□□□□□ -2.43
LBX1P52954 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.15□□□□□ -2.43
LBX1P52954 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.15□□□□□ -2.43
LBX1P52954 RNU6-789P-201ENST00000517105 102 ntBASIC-0.15□□□□□ -2.43
LBX1P52954 MIR4441-201ENST00000582623 100 ntBASIC-0.15□□□□□ -2.43
LBX1P52954 uc_338.10-201ENST00000621872 182 ntBASIC-0.15□□□□□ -2.43
LBX1P52954 MIR1295B-201ENST00000636144 60 ntBASIC-0.15□□□□□ -2.43
LBX1P52954 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.16□□□□□ -2.44
LBX1P52954 SNORD116-10-201ENST00000363791 102 ntBASIC-0.16□□□□□ -2.44
LBX1P52954 RNU6-154P-201ENST00000384306 106 ntBASIC-0.16□□□□□ -2.44
LBX1P52954 MT-TQ-201ENST00000387372 72 ntBASIC-0.16□□□□□ -2.44
LBX1P52954 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.16□□□□□ -2.44
LBX1P52954 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.17□□□□□ -2.44
LBX1P52954 SNORD114-29-201ENST00000364819 70 ntBASIC-0.17□□□□□ -2.44
LBX1P52954 RNU6-54P-201ENST00000365563 107 ntBASIC-0.17□□□□□ -2.44
LBX1P52954 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.17□□□□□ -2.44
LBX1P52954 RNU7-61P-201ENST00000515897 61 ntBASIC-0.17□□□□□ -2.44
LBX1P52954 SNORA63.2-201ENST00000362603 126 ntBASIC-0.18□□□□□ -2.44
LBX1P52954 RNU6-811P-201ENST00000384069 107 ntBASIC-0.18□□□□□ -2.44
LBX1P52954 SNORA49-201ENST00000386157 136 ntBASIC-0.18□□□□□ -2.44
LBX1P52954 MIR548U-201ENST00000390728 81 ntBASIC-0.18□□□□□ -2.44
LBX1P52954 RNU6-519P-201ENST00000410590 108 ntBASIC-0.18□□□□□ -2.44
LBX1P52954 RNU4-61P-201ENST00000411243 107 ntBASIC-0.18□□□□□ -2.44
LBX1P52954 RNU6-109P-201ENST00000516364 107 ntBASIC-0.18□□□□□ -2.44
LBX1P52954 RNU6-184P-201ENST00000516514 107 ntBASIC-0.18□□□□□ -2.44
LBX1P52954 MIR655-201ENST00000362159 97 ntBASIC-0.19□□□□□ -2.44
LBX1P52954 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.19□□□□□ -2.44
LBX1P52954 MIR652-201ENST00000385278 98 ntBASIC-0.19□□□□□ -2.44
LBX1P52954 RNA5SP292-201ENST00000390974 118 ntBASIC-0.19□□□□□ -2.44
LBX1P52954 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
LBX1P52954 MIR6507-201ENST00000613630 70 ntBASIC-0.19□□□□□ -2.44
LBX1P52954 MIR6738-201ENST00000619620 64 ntBASIC-0.19□□□□□ -2.44
LBX1P52954 RNU6-215P-201ENST00000365169 102 ntBASIC-0.2□□□□□ -2.44
LBX1P52954 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.2□□□□□ -2.44
LBX1P52954 MIR1285-2-201ENST00000408311 88 ntBASIC-0.2□□□□□ -2.44
LBX1P52954 AC244250.2-201ENST00000418731 148 ntBASIC-0.2□□□□□ -2.44
LBX1P52954 AL606753.1-201ENST00000427435 87 ntBASIC-0.2□□□□□ -2.44
LBX1P52954 SNORD42B-201ENST00000458893 67 ntBASIC-0.2□□□□□ -2.44
LBX1P52954 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.2□□□□□ -2.44
LBX1P52954 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.2□□□□□ -2.44
LBX1P52954 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.21□□□□□ -2.44
LBX1P52954 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.21□□□□□ -2.44
LBX1P52954 AC244090.1-201ENST00000441884 93 ntBASIC-0.21□□□□□ -2.44
LBX1P52954 AC145423.2-201ENST00000610631 239 ntBASIC-0.21□□□□□ -2.44
LBX1P52954 MIR20A-201ENST00000362279 71 ntBASIC-0.22□□□□□ -2.44
LBX1P52954 SNORD90-201ENST00000391145 111 ntBASIC-0.22□□□□□ -2.44
LBX1P52954 MTATP8P2-201ENST00000435212 202 ntBASIC-0.22□□□□□ -2.44
LBX1P52954 SNORA18.1-201ENST00000363418 128 ntBASIC-0.23□□□□□ -2.45
LBX1P52954 RNA5SP275-201ENST00000363936 118 ntBASIC-0.23□□□□□ -2.45
LBX1P52954 MIR582-201ENST00000365731 98 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 215.7 ms