Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.37□□□□□ -2.63
COL6A3P12111 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.37□□□□□ -2.63
COL6A3P12111 AC096644.2-201ENST00000429278 159 ntBASIC-1.37□□□□□ -2.63
COL6A3P12111 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.37□□□□□ -2.63
COL6A3P12111 AL162413.1-201ENST00000603198 110 ntBASIC-1.37□□□□□ -2.63
COL6A3P12111 AC107308.1-201ENST00000615897 301 ntBASIC-1.37□□□□□ -2.63
COL6A3P12111 MIR376A1-201ENST00000616574 68 ntBASIC-1.37□□□□□ -2.63
COL6A3P12111 AC124864.2-201ENST00000624736 186 ntBASIC-1.37□□□□□ -2.63
COL6A3P12111 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.37□□□□□ -2.63
COL6A3P12111 RNU6-130P-201ENST00000411112 103 ntBASIC-1.37□□□□□ -2.63
COL6A3P12111 AC025166.1-201ENST00000612411 163 ntBASIC-1.37□□□□□ -2.63
COL6A3P12111 RNU6-662P-201ENST00000384253 104 ntBASIC-1.38□□□□□ -2.63
COL6A3P12111 MTND4LP1-201ENST00000446263 157 ntBASIC-1.38□□□□□ -2.63
COL6A3P12111 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.38□□□□□ -2.63
COL6A3P12111 MIR1321-201ENST00000637766 79 ntBASIC-1.38□□□□□ -2.63
COL6A3P12111 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.38□□□□□ -2.63
COL6A3P12111 MIR514A2-201ENST00000385131 88 ntBASIC-1.38□□□□□ -2.63
COL6A3P12111 MIR514A3-201ENST00000385132 88 ntBASIC-1.38□□□□□ -2.63
COL6A3P12111 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.38□□□□□ -2.63
COL6A3P12111 RNU7-169P-201ENST00000459456 61 ntBASIC-1.38□□□□□ -2.63
COL6A3P12111 AC037487.3-201ENST00000606668 112 ntBASIC-1.38□□□□□ -2.63
COL6A3P12111 AL050303.3-201ENST00000613704 284 ntBASIC-1.38□□□□□ -2.63
COL6A3P12111 SNORA25.1-201ENST00000362326 128 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 MIR630-201ENST00000384957 97 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 SNORD115-46-201ENST00000390982 71 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 AC139453.2-201ENST00000487255 133 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 RNY4P20-201ENST00000516678 93 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 RNU6-835P-201ENST00000516974 104 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 MIR3163-201ENST00000581592 73 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 AL731768.1-201ENST00000603124 139 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 MIR202-201ENST00000362219 110 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 SNORD113-8-201ENST00000363497 74 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 SNORD115-37-201ENST00000363768 82 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 RNU6-669P-201ENST00000365575 107 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.39□□□□□ -2.63
COL6A3P12111 RNY4P18-201ENST00000391107 89 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 SEPT14P3-201ENST00000439401 183 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 AL732372.2-207ENST00000445840 183 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 SEPT14P2-201ENST00000453405 183 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-1.39□□□□□ -2.63
COL6A3P12111 SNORD63.2-201ENST00000516303 64 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 RNU6-752P-201ENST00000516376 102 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 FO082796.1-201ENST00000523795 183 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 RNU6-834P-201ENST00000362367 110 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 SNORD1B-201ENST00000363091 84 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 RNU6-816P-201ENST00000390914 107 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 MIR548Z-201ENST00000584743 97 ntBASIC-1.39□□□□□ -2.63
COL6A3P12111 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.4□□□□□ -2.63
COL6A3P12111 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.4□□□□□ -2.63
COL6A3P12111 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.4□□□□□ -2.63
COL6A3P12111 AC024614.3-201ENST00000637860 256 ntBASIC-1.4□□□□□ -2.63
COL6A3P12111 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.4□□□□□ -2.63
COL6A3P12111 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.4□□□□□ -2.63
COL6A3P12111 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.4□□□□□ -2.63
COL6A3P12111 MTND3P10-201ENST00000450967 341 ntBASIC-1.4□□□□□ -2.63
COL6A3P12111 RNU6-971P-201ENST00000516920 106 ntBASIC-1.4□□□□□ -2.63
COL6A3P12111 RNU6-699P-201ENST00000517081 110 ntBASIC-1.4□□□□□ -2.63
COL6A3P12111 MIR369-201ENST00000362155 70 ntBASIC-1.41□□□□□ -2.63
COL6A3P12111 SNORD113-3-201ENST00000364830 72 ntBASIC-1.41□□□□□ -2.63
COL6A3P12111 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.41□□□□□ -2.63
COL6A3P12111 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.41□□□□□ -2.63
COL6A3P12111 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.41□□□□□ -2.63
COL6A3P12111 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.41□□□□□ -2.64
COL6A3P12111 RNU6-937P-201ENST00000384325 106 ntBASIC-1.41□□□□□ -2.64
COL6A3P12111 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.41□□□□□ -2.64
COL6A3P12111 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.41□□□□□ -2.64
COL6A3P12111 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.41□□□□□ -2.64
COL6A3P12111 RNU2-72P-201ENST00000411175 163 ntBASIC-1.41□□□□□ -2.64
COL6A3P12111 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.42□□□□□ -2.64
COL6A3P12111 RNU6-310P-201ENST00000384655 107 ntBASIC-1.42□□□□□ -2.64
COL6A3P12111 MIR579-201ENST00000385221 98 ntBASIC-1.42□□□□□ -2.64
COL6A3P12111 RNU7-174P-201ENST00000516248 59 ntBASIC-1.42□□□□□ -2.64
COL6A3P12111 U6.81-201ENST00000612550 106 ntBASIC-1.42□□□□□ -2.64
COL6A3P12111 RNU4-90P-201ENST00000362773 141 ntBASIC-1.42□□□□□ -2.64
COL6A3P12111 RNU6-361P-201ENST00000364454 107 ntBASIC-1.42□□□□□ -2.64
COL6A3P12111 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.42□□□□□ -2.64
COL6A3P12111 AC099799.1-201ENST00000439809 192 ntBASIC-1.42□□□□□ -2.64
COL6A3P12111 AC002553.4-201ENST00000616896 331 ntBASIC-1.42□□□□□ -2.64
COL6A3P12111 RNU6-211P-201ENST00000384047 107 ntBASIC-1.43□□□□□ -2.64
COL6A3P12111 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.43□□□□□ -2.64
COL6A3P12111 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.43□□□□□ -2.64
COL6A3P12111 AC138305.3-201ENST00000624988 240 ntBASIC-1.43□□□□□ -2.64
COL6A3P12111 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.43□□□□□ -2.64
COL6A3P12111 RNU6-508P-201ENST00000363231 103 ntBASIC-1.43□□□□□ -2.64
COL6A3P12111 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.43□□□□□ -2.64
COL6A3P12111 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.43□□□□□ -2.64
COL6A3P12111 SNORD45B-201ENST00000364617 72 ntBASIC-1.43□□□□□ -2.64
COL6A3P12111 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.43□□□□□ -2.64
COL6A3P12111 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.43□□□□□ -2.64
COL6A3P12111 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.43□□□□□ -2.64
COL6A3P12111 SNORD2.1-201ENST00000458762 69 ntBASIC-1.43□□□□□ -2.64
COL6A3P12111 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.44□□□□□ -2.64
COL6A3P12111 MTND2P14-201ENST00000482139 351 ntBASIC-1.44□□□□□ -2.64
COL6A3P12111 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.44□□□□□ -2.64
COL6A3P12111 SNORD116-16-201ENST00000384533 92 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms