Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 MIR151B-201ENST00000584249 96 ntBASIC1.88□□□□□ -2.11
CHGAP10645 MIR3660-201ENST00000584845 100 ntBASIC1.88□□□□□ -2.11
CHGAP10645 MIR6788-201ENST00000618842 66 ntBASIC1.88□□□□□ -2.11
CHGAP10645 MIR18A-201ENST00000362310 71 ntBASIC1.87□□□□□ -2.11
CHGAP10645 SNORD114-4-201ENST00000363962 75 ntBASIC1.87□□□□□ -2.11
CHGAP10645 SNORD99-201ENST00000408612 74 ntBASIC1.87□□□□□ -2.11
CHGAP10645 MTND4LP1-201ENST00000446263 157 ntBASIC1.87□□□□□ -2.11
CHGAP10645 AC011195.1-201ENST00000578177 177 ntBASIC1.87□□□□□ -2.11
CHGAP10645 AL162376.1-201ENST00000624117 175 ntBASIC1.87□□□□□ -2.11
CHGAP10645 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHGAP10645 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
CHGAP10645 MIR548J-201ENST00000408833 112 ntBASIC1.86□□□□□ -2.11
CHGAP10645 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.85□□□□□ -2.11
CHGAP10645 RNA5SP61-201ENST00000516453 100 ntBASIC1.85□□□□□ -2.11
CHGAP10645 AC069503.3-201ENST00000618674 145 ntBASIC1.85□□□□□ -2.11
CHGAP10645 RNA5SP436-201ENST00000516020 115 ntBASIC1.84□□□□□ -2.11
CHGAP10645 RNA5SP227-201ENST00000516184 113 ntBASIC1.84□□□□□ -2.11
CHGAP10645 RNU6-982P-201ENST00000516216 102 ntBASIC1.84□□□□□ -2.11
CHGAP10645 Y_RNA.30-201ENST00000362572 97 ntBASIC1.82□□□□□ -2.12
CHGAP10645 SNORA2.1-201ENST00000363089 137 ntBASIC1.82□□□□□ -2.12
CHGAP10645 AC103706.3-201ENST00000636297 85 ntBASIC1.82□□□□□ -2.12
CHGAP10645 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CHGAP10645 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.82□□□□□ -2.12
CHGAP10645 RNA5SP484-201ENST00000458857 111 ntBASIC1.81□□□□□ -2.12
CHGAP10645 MIR6767-201ENST00000637302 66 ntBASIC1.81□□□□□ -2.12
CHGAP10645 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
CHGAP10645 MIR4511-201ENST00000582784 87 ntBASIC1.8□□□□□ -2.12
CHGAP10645 RNU6-668P-201ENST00000364180 107 ntBASIC1.79□□□□□ -2.12
CHGAP10645 RNU5B-6P-201ENST00000516765 68 ntBASIC1.79□□□□□ -2.12
CHGAP10645 RNA5SP268-201ENST00000516828 124 ntBASIC1.78□□□□□ -2.12
CHGAP10645 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.78□□□□□ -2.12
CHGAP10645 SNORA36.1-201ENST00000363424 132 ntBASIC1.77□□□□□ -2.13
CHGAP10645 RNU6-997P-201ENST00000384725 107 ntBASIC1.77□□□□□ -2.13
CHGAP10645 Y_RNA.178-201ENST00000363832 102 ntBASIC1.76□□□□□ -2.13
CHGAP10645 RNA5SP94-201ENST00000516917 108 ntBASIC1.76□□□□□ -2.13
CHGAP10645 Y_RNA.250-201ENST00000364542 110 ntBASIC1.75□□□□□ -2.13
CHGAP10645 RNU6-645P-201ENST00000364649 106 ntBASIC1.75□□□□□ -2.13
CHGAP10645 RNU6-990P-201ENST00000364385 104 ntBASIC1.74□□□□□ -2.13
CHGAP10645 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.74□□□□□ -2.13
CHGAP10645 AC018659.1-201ENST00000551083 169 ntBASIC1.74□□□□□ -2.13
CHGAP10645 MIR758-201ENST00000390227 88 ntBASIC1.73□□□□□ -2.13
CHGAP10645 AL353765.1-201ENST00000605514 183 ntBASIC1.73□□□□□ -2.13
CHGAP10645 RNU6-955P-201ENST00000410497 104 ntBASIC1.72□□□□□ -2.13
CHGAP10645 SNORA40.17-201ENST00000517256 115 ntBASIC1.72□□□□□ -2.13
CHGAP10645 AC068338.1-201ENST00000565567 176 ntBASIC1.72□□□□□ -2.13
CHGAP10645 MIR6739-201ENST00000622461 75 ntBASIC1.72□□□□□ -2.13
CHGAP10645 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.72□□□□□ -2.13
CHGAP10645 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.71□□□□□ -2.14
CHGAP10645 RN7SL793P-201ENST00000583259 296 ntBASIC1.71□□□□□ -2.14
CHGAP10645 MIR4295-201ENST00000585286 85 ntBASIC1.71□□□□□ -2.14
CHGAP10645 RNU6-1187P-201ENST00000364771 110 ntBASIC1.7□□□□□ -2.14
CHGAP10645 RNA5SP222-201ENST00000411039 105 ntBASIC1.7□□□□□ -2.14
CHGAP10645 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.7□□□□□ -2.14
CHGAP10645 AC006210.1-201ENST00000424882 111 ntBASIC1.69□□□□□ -2.14
CHGAP10645 AC087343.1-201ENST00000477341 475 ntBASIC1.69□□□□□ -2.14
CHGAP10645 RNA5SP147-201ENST00000516493 109 ntBASIC1.69□□□□□ -2.14
CHGAP10645 MIR7107-201ENST00000611489 80 ntBASIC1.69□□□□□ -2.14
CHGAP10645 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CHGAP10645 Y_RNA.407-201ENST00000383986 113 ntBASIC1.68□□□□□ -2.14
CHGAP10645 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.68□□□□□ -2.14
CHGAP10645 MIR4661-201ENST00000582720 75 ntBASIC1.68□□□□□ -2.14
CHGAP10645 AL109933.3-201ENST00000619095 188 ntBASIC1.68□□□□□ -2.14
CHGAP10645 Y_RNA.375-201ENST00000365625 101 ntBASIC1.67□□□□□ -2.14
CHGAP10645 RNU6-939P-201ENST00000384634 107 ntBASIC1.67□□□□□ -2.14
CHGAP10645 SNORD110-201ENST00000408189 75 ntBASIC1.67□□□□□ -2.14
CHGAP10645 RNU6-542P-201ENST00000516405 103 ntBASIC1.67□□□□□ -2.14
CHGAP10645 MIR9-2-201ENST00000384838 87 ntBASIC1.66□□□□□ -2.14
CHGAP10645 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
CHGAP10645 RNU6-656P-201ENST00000516785 107 ntBASIC1.65□□□□□ -2.15
CHGAP10645 RNU6-1162P-201ENST00000384443 104 ntBASIC1.64□□□□□ -2.15
CHGAP10645 SCARNA17.3-201ENST00000516381 125 ntBASIC1.64□□□□□ -2.15
CHGAP10645 MIR5000-201ENST00000577717 103 ntBASIC1.63□□□□□ -2.15
CHGAP10645 RNU6-669P-201ENST00000365575 107 ntBASIC1.62□□□□□ -2.15
CHGAP10645 AC110620.1-201ENST00000416042 228 ntBASIC1.62□□□□□ -2.15
CHGAP10645 RNA5SP215-201ENST00000363440 122 ntBASIC1.61□□□□□ -2.15
CHGAP10645 MIR521-2-201ENST00000384818 87 ntBASIC1.61□□□□□ -2.15
CHGAP10645 MIR216A-201ENST00000385063 110 ntBASIC1.61□□□□□ -2.15
CHGAP10645 MIR652-201ENST00000385278 98 ntBASIC1.6□□□□□ -2.15
CHGAP10645 MIR7974-201ENST00000615835 79 ntBASIC1.6□□□□□ -2.15
CHGAP10645 SNORA36.2-201ENST00000384004 127 ntBASIC1.57□□□□□ -2.16
CHGAP10645 SNORA15B-2-201ENST00000384058 135 ntBASIC1.57□□□□□ -2.16
CHGAP10645 SNORA15B-1-201ENST00000384334 135 ntBASIC1.57□□□□□ -2.16
CHGAP10645 MIR4473-201ENST00000583731 91 ntBASIC1.57□□□□□ -2.16
CHGAP10645 MIR140-201ENST00000385282 100 ntBASIC1.56□□□□□ -2.16
CHGAP10645 AC021146.9-201ENST00000512503 156 ntBASIC1.56□□□□□ -2.16
CHGAP10645 RNU6-1089P-201ENST00000516473 104 ntBASIC1.56□□□□□ -2.16
CHGAP10645 MIR5706-201ENST00000579841 80 ntBASIC1.56□□□□□ -2.16
CHGAP10645 MIR548AE1-201ENST00000583292 70 ntBASIC1.55□□□□□ -2.16
CHGAP10645 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.55□□□□□ -2.16
CHGAP10645 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CHGAP10645 RNA5SP517-201ENST00000364724 117 ntBASIC1.54□□□□□ -2.16
CHGAP10645 SNORD114-21-201ENST00000606412 72 ntBASIC1.54□□□□□ -2.16
CHGAP10645 SNORA70.25-201ENST00000612741 95 ntBASIC1.54□□□□□ -2.16
CHGAP10645 uc_338.10-201ENST00000621872 182 ntBASIC1.54□□□□□ -2.16
CHGAP10645 SNORA63.6-201ENST00000364921 119 ntBASIC1.53□□□□□ -2.16
CHGAP10645 MIR608-201ENST00000384820 100 ntBASIC1.53□□□□□ -2.16
CHGAP10645 snoU13.13-201ENST00000458842 104 ntBASIC1.53□□□□□ -2.16
CHGAP10645 Y_RNA.633-201ENST00000459107 95 ntBASIC1.53□□□□□ -2.16
CHGAP10645 AC092634.7-201ENST00000621022 103 ntBASIC1.53□□□□□ -2.16
CHGAP10645 MIR373-201ENST00000362273 69 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 369.4 ms