Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 MIR373-201ENST00000362273 69 ntBASIC1.15□□□□□ -2.23
NEFMP07197 MIR18A-201ENST00000362310 71 ntBASIC1.15□□□□□ -2.23
NEFMP07197 RNU6-604P-201ENST00000390917 100 ntBASIC1.15□□□□□ -2.23
NEFMP07197 RNU6-881P-201ENST00000516813 102 ntBASIC1.15□□□□□ -2.23
NEFMP07197 RNU6-1223P-201ENST00000517124 104 ntBASIC1.15□□□□□ -2.23
NEFMP07197 NAMPTP3-201ENST00000569273 224 ntBASIC1.15□□□□□ -2.23
NEFMP07197 MIR6509-201ENST00000614603 85 ntBASIC1.15□□□□□ -2.23
NEFMP07197 SNORD115-22-201ENST00000364456 82 ntBASIC1.14□□□□□ -2.23
NEFMP07197 RNU1-141P-201ENST00000364623 158 ntBASIC1.14□□□□□ -2.23
NEFMP07197 SNORD45A-201ENST00000384512 84 ntBASIC1.14□□□□□ -2.23
NEFMP07197 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.14□□□□□ -2.23
NEFMP07197 RNU6-269P-201ENST00000391077 97 ntBASIC1.13□□□□□ -2.23
NEFMP07197 AC125388.1-201ENST00000459631 156 ntBASIC1.13□□□□□ -2.23
NEFMP07197 RNA5SP227-201ENST00000516184 113 ntBASIC1.13□□□□□ -2.23
NEFMP07197 MIR4698-201ENST00000577795 80 ntBASIC1.13□□□□□ -2.23
NEFMP07197 MIR3973-201ENST00000579824 107 ntBASIC1.13□□□□□ -2.23
NEFMP07197 AL162376.1-201ENST00000624117 175 ntBASIC1.13□□□□□ -2.23
NEFMP07197 RNA5SP436-201ENST00000516020 115 ntBASIC1.12□□□□□ -2.23
NEFMP07197 ACA64.5-201ENST00000516207 127 ntBASIC1.12□□□□□ -2.23
NEFMP07197 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.12□□□□□ -2.23
NEFMP07197 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
NEFMP07197 SNORD114-2-201ENST00000363953 78 ntBASIC1.11□□□□□ -2.23
NEFMP07197 SNORD114-4-201ENST00000363962 75 ntBASIC1.11□□□□□ -2.23
NEFMP07197 RNU6-800P-201ENST00000384473 103 ntBASIC1.11□□□□□ -2.23
NEFMP07197 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
NEFMP07197 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.11□□□□□ -2.23
NEFMP07197 AC073869.9-201ENST00000641610 120 ntBASIC1.11□□□□□ -2.23
NEFMP07197 SNORD113.1-201ENST00000363280 73 ntBASIC1.1□□□□□ -2.23
NEFMP07197 MIR7-2-201ENST00000384970 110 ntBASIC1.1□□□□□ -2.23
NEFMP07197 MIR146A-201ENST00000385201 99 ntBASIC1.1□□□□□ -2.23
NEFMP07197 AC069503.3-201ENST00000618674 145 ntBASIC1.1□□□□□ -2.23
NEFMP07197 RNU6-1216P-201ENST00000362590 107 ntBASIC1.09□□□□□ -2.23
NEFMP07197 Y_RNA.340-201ENST00000365330 92 ntBASIC1.09□□□□□ -2.23
NEFMP07197 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.09□□□□□ -2.23
NEFMP07197 SNORD42B-201ENST00000458893 67 ntBASIC1.09□□□□□ -2.23
NEFMP07197 RNA5SP268-201ENST00000516828 124 ntBASIC1.09□□□□□ -2.23
NEFMP07197 RNA5SP94-201ENST00000516917 108 ntBASIC1.09□□□□□ -2.23
NEFMP07197 AL353765.1-201ENST00000605514 183 ntBASIC1.09□□□□□ -2.23
NEFMP07197 Y_RNA.386-201ENST00000383913 105 ntBASIC1.08□□□□□ -2.24
NEFMP07197 Y_RNA.540-201ENST00000384638 111 ntBASIC1.08□□□□□ -2.24
NEFMP07197 RNA5SP484-201ENST00000458857 111 ntBASIC1.08□□□□□ -2.24
NEFMP07197 PVT1_3.1-201ENST00000620853 95 ntBASIC1.08□□□□□ -2.24
NEFMP07197 MIR6866-201ENST00000638146 69 ntBASIC1.08□□□□□ -2.24
NEFMP07197 SNORA36.1-201ENST00000363424 132 ntBASIC1.07□□□□□ -2.24
NEFMP07197 PSMC1P5-201ENST00000512850 177 ntBASIC1.07□□□□□ -2.24
NEFMP07197 MIR3657-201ENST00000584818 117 ntBASIC1.07□□□□□ -2.24
NEFMP07197 SNORA25.4-201ENST00000363666 124 ntBASIC1.06□□□□□ -2.24
NEFMP07197 RNU6-260P-201ENST00000384092 107 ntBASIC1.06□□□□□ -2.24
NEFMP07197 Y_RNA.443-201ENST00000384135 111 ntBASIC1.06□□□□□ -2.24
NEFMP07197 MIR203A-201ENST00000384836 110 ntBASIC1.06□□□□□ -2.24
NEFMP07197 RNU6-630P-201ENST00000391258 106 ntBASIC1.06□□□□□ -2.24
NEFMP07197 RNA5SP222-201ENST00000411039 105 ntBASIC1.06□□□□□ -2.24
NEFMP07197 SNORA2.1-201ENST00000363089 137 ntBASIC1.05□□□□□ -2.24
NEFMP07197 RNU6-351P-201ENST00000516097 100 ntBASIC1.05□□□□□ -2.24
NEFMP07197 MIR4653-201ENST00000585107 83 ntBASIC1.05□□□□□ -2.24
NEFMP07197 MTND4LP1-201ENST00000446263 157 ntBASIC1.04□□□□□ -2.24
NEFMP07197 RNA5SP480-201ENST00000516840 109 ntBASIC1.04□□□□□ -2.24
NEFMP07197 CYP3A137P-201ENST00000562436 69 ntBASIC1.04□□□□□ -2.24
NEFMP07197 AC005520.4-201ENST00000604337 90 ntBASIC1.04□□□□□ -2.24
NEFMP07197 MIR7107-201ENST00000611489 80 ntBASIC1.04□□□□□ -2.24
NEFMP07197 RNU6-471P-201ENST00000383944 106 ntBASIC1.03□□□□□ -2.24
NEFMP07197 MIR598-201ENST00000384868 97 ntBASIC1.03□□□□□ -2.24
NEFMP07197 MIR1265-201ENST00000408444 86 ntBASIC1.03□□□□□ -2.24
NEFMP07197 RNU5B-6P-201ENST00000516765 68 ntBASIC1.03□□□□□ -2.24
NEFMP07197 MIR5000-201ENST00000577717 103 ntBASIC1.03□□□□□ -2.24
NEFMP07197 SNORD116-24-201ENST00000384549 92 ntBASIC1.02□□□□□ -2.25
NEFMP07197 MIR608-201ENST00000384820 100 ntBASIC1.02□□□□□ -2.25
NEFMP07197 AC006210.1-201ENST00000424882 111 ntBASIC1.02□□□□□ -2.25
NEFMP07197 Y_RNA.250-201ENST00000364542 110 ntBASIC1.01□□□□□ -2.25
NEFMP07197 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.01□□□□□ -2.25
NEFMP07197 Y_RNA.205-201ENST00000364128 113 ntBASIC1□□□□□ -2.25
NEFMP07197 Y_RNA.407-201ENST00000383986 113 ntBASIC1□□□□□ -2.25
NEFMP07197 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
NEFMP07197 RNU6-982P-201ENST00000516216 102 ntBASIC1□□□□□ -2.25
NEFMP07197 AC018659.1-201ENST00000551083 169 ntBASIC1□□□□□ -2.25
NEFMP07197 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1□□□□□ -2.25
NEFMP07197 MIR6835-201ENST00000621552 64 ntBASIC1□□□□□ -2.25
NEFMP07197 MIR140-201ENST00000385282 100 ntBASIC0.99□□□□□ -2.25
NEFMP07197 SNORD110-201ENST00000408189 75 ntBASIC0.99□□□□□ -2.25
NEFMP07197 RNU6-668P-201ENST00000364180 107 ntBASIC0.98□□□□□ -2.25
NEFMP07197 RNU6-990P-201ENST00000364385 104 ntBASIC0.98□□□□□ -2.25
NEFMP07197 SNORA36.2-201ENST00000384004 127 ntBASIC0.98□□□□□ -2.25
NEFMP07197 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.98□□□□□ -2.25
NEFMP07197 RNU6-645P-201ENST00000364649 106 ntBASIC0.97□□□□□ -2.25
NEFMP07197 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
NEFMP07197 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.96□□□□□ -2.26
NEFMP07197 AL590095.2-201ENST00000604136 117 ntBASIC0.96□□□□□ -2.26
NEFMP07197 MIR6739-201ENST00000622461 75 ntBASIC0.96□□□□□ -2.26
NEFMP07197 AC103706.3-201ENST00000636297 85 ntBASIC0.96□□□□□ -2.26
NEFMP07197 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
NEFMP07197 SCARNA17.3-201ENST00000516381 125 ntBASIC0.95□□□□□ -2.26
NEFMP07197 RNA5SP147-201ENST00000516493 109 ntBASIC0.95□□□□□ -2.26
NEFMP07197 SNORA40.17-201ENST00000517256 115 ntBASIC0.95□□□□□ -2.26
NEFMP07197 MIR5706-201ENST00000579841 80 ntBASIC0.95□□□□□ -2.26
NEFMP07197 MIR4714-201ENST00000580728 77 ntBASIC0.95□□□□□ -2.26
NEFMP07197 AC092634.7-201ENST00000621022 103 ntBASIC0.95□□□□□ -2.26
NEFMP07197 RNA5SP517-201ENST00000364724 117 ntBASIC0.94□□□□□ -2.26
NEFMP07197 MIR4511-201ENST00000582784 87 ntBASIC0.94□□□□□ -2.26
NEFMP07197 MIR4473-201ENST00000583731 91 ntBASIC0.94□□□□□ -2.26
NEFMP07197 SNORD114-26-201ENST00000363543 72 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms