Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 RNU6-535P-201ENST00000384722 107 ntBASIC1.42□□□□□ -2.18
GRIN3BO60391 MIR203A-201ENST00000384836 110 ntBASIC1.42□□□□□ -2.18
GRIN3BO60391 U3.27-201ENST00000391237 200 ntBASIC1.42□□□□□ -2.18
GRIN3BO60391 AL691482.2-201ENST00000457453 84 ntBASIC1.42□□□□□ -2.18
GRIN3BO60391 U7.7-201ENST00000459276 60 ntBASIC1.42□□□□□ -2.18
GRIN3BO60391 RNA5SP257-201ENST00000363023 116 ntBASIC1.41□□□□□ -2.18
GRIN3BO60391 RNU1-124P-201ENST00000363861 145 ntBASIC1.41□□□□□ -2.18
GRIN3BO60391 SNORA75.1-201ENST00000391130 148 ntBASIC1.41□□□□□ -2.18
GRIN3BO60391 SNORD42B-201ENST00000458893 67 ntBASIC1.41□□□□□ -2.18
GRIN3BO60391 HAR1A.1-201ENST00000459583 118 ntBASIC1.41□□□□□ -2.18
GRIN3BO60391 RNU6-542P-201ENST00000516405 103 ntBASIC1.41□□□□□ -2.18
GRIN3BO60391 AC073869.9-201ENST00000641610 120 ntBASIC1.41□□□□□ -2.18
GRIN3BO60391 MIR26B-201ENST00000362251 77 ntBASIC1.4□□□□□ -2.19
GRIN3BO60391 RNU6-54P-201ENST00000365563 107 ntBASIC1.4□□□□□ -2.19
GRIN3BO60391 RNU6-1126P-201ENST00000384002 107 ntBASIC1.4□□□□□ -2.19
GRIN3BO60391 RNU6-1184P-201ENST00000384588 108 ntBASIC1.4□□□□□ -2.19
GRIN3BO60391 RNA5SP330-201ENST00000517096 96 ntBASIC1.4□□□□□ -2.19
GRIN3BO60391 RNU6-1057P-201ENST00000517162 102 ntBASIC1.4□□□□□ -2.19
GRIN3BO60391 MIR3657-201ENST00000584818 117 ntBASIC1.4□□□□□ -2.19
GRIN3BO60391 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
GRIN3BO60391 RNA5SP403-201ENST00000363598 108 ntBASIC1.39□□□□□ -2.19
GRIN3BO60391 RNU6-668P-201ENST00000364180 107 ntBASIC1.39□□□□□ -2.19
GRIN3BO60391 RNU6-645P-201ENST00000364649 106 ntBASIC1.39□□□□□ -2.19
GRIN3BO60391 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
GRIN3BO60391 Y_RNA.32-201ENST00000362589 110 ntBASIC1.38□□□□□ -2.19
GRIN3BO60391 Y_RNA.174-201ENST00000363781 105 ntBASIC1.38□□□□□ -2.19
GRIN3BO60391 RNU6-936P-201ENST00000384005 107 ntBASIC1.38□□□□□ -2.19
GRIN3BO60391 MIR150-201ENST00000385048 84 ntBASIC1.38□□□□□ -2.19
GRIN3BO60391 RNU6-656P-201ENST00000516785 107 ntBASIC1.38□□□□□ -2.19
GRIN3BO60391 RNA5SP404-201ENST00000517118 132 ntBASIC1.38□□□□□ -2.19
GRIN3BO60391 Y_RNA.722-201ENST00000517279 114 ntBASIC1.38□□□□□ -2.19
GRIN3BO60391 RNU7-161P-201ENST00000517289 62 ntBASIC1.38□□□□□ -2.19
GRIN3BO60391 MIR6857-201ENST00000613267 93 ntBASIC1.38□□□□□ -2.19
GRIN3BO60391 MIR6509-201ENST00000614603 85 ntBASIC1.38□□□□□ -2.19
GRIN3BO60391 MIR548O2-201ENST00000616090 70 ntBASIC1.38□□□□□ -2.19
GRIN3BO60391 MIR618-201ENST00000385287 98 ntBASIC1.37□□□□□ -2.19
GRIN3BO60391 RNA5SP299-201ENST00000391203 116 ntBASIC1.37□□□□□ -2.19
GRIN3BO60391 RNU6-955P-201ENST00000410497 104 ntBASIC1.37□□□□□ -2.19
GRIN3BO60391 AC010487.4-201ENST00000637027 61 ntBASIC1.37□□□□□ -2.19
GRIN3BO60391 RNU6-990P-201ENST00000364385 104 ntBASIC1.36□□□□□ -2.19
GRIN3BO60391 RNU6-939P-201ENST00000384634 107 ntBASIC1.36□□□□□ -2.19
GRIN3BO60391 SNORD89-201ENST00000390981 114 ntBASIC1.36□□□□□ -2.19
GRIN3BO60391 MTND4LP1-201ENST00000446263 157 ntBASIC1.36□□□□□ -2.19
GRIN3BO60391 RNU6-122P-201ENST00000516818 107 ntBASIC1.36□□□□□ -2.19
GRIN3BO60391 uc_338.16-201ENST00000621804 95 ntBASIC1.36□□□□□ -2.19
GRIN3BO60391 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
GRIN3BO60391 RNU6-940P-201ENST00000363433 104 ntBASIC1.35□□□□□ -2.19
GRIN3BO60391 SNORD114-24-201ENST00000365029 72 ntBASIC1.35□□□□□ -2.19
GRIN3BO60391 MIR519E-201ENST00000385075 84 ntBASIC1.35□□□□□ -2.19
GRIN3BO60391 SNORD105-201ENST00000386910 85 ntBASIC1.35□□□□□ -2.19
GRIN3BO60391 SNORD124-201ENST00000459577 104 ntBASIC1.35□□□□□ -2.19
GRIN3BO60391 SNORA31.14-201ENST00000516728 116 ntBASIC1.35□□□□□ -2.19
GRIN3BO60391 SNORD60.1-201ENST00000362451 73 ntBASIC1.34□□□□□ -2.19
GRIN3BO60391 RNA5SP62-201ENST00000363457 110 ntBASIC1.34□□□□□ -2.19
GRIN3BO60391 SNORD114-23-201ENST00000363536 72 ntBASIC1.34□□□□□ -2.19
GRIN3BO60391 SNORD115-44-201ENST00000365391 82 ntBASIC1.34□□□□□ -2.19
GRIN3BO60391 AC002350.1-201ENST00000490759 375 ntBASIC1.33□□□□□ -2.2
GRIN3BO60391 RNU7-13P-201ENST00000516413 62 ntBASIC1.33□□□□□ -2.2
GRIN3BO60391 AC025627.3-201ENST00000582078 182 ntBASIC1.33□□□□□ -2.2
GRIN3BO60391 MIR3938-201ENST00000582157 103 ntBASIC1.33□□□□□ -2.2
GRIN3BO60391 MIR617-201ENST00000385030 97 ntBASIC1.32□□□□□ -2.2
GRIN3BO60391 MIR6513-201ENST00000621188 64 ntBASIC1.32□□□□□ -2.2
GRIN3BO60391 SNORD115-24-201ENST00000363528 82 ntBASIC1.31□□□□□ -2.2
GRIN3BO60391 RNU6-260P-201ENST00000384092 107 ntBASIC1.31□□□□□ -2.2
GRIN3BO60391 RNU4-88P-201ENST00000411220 86 ntBASIC1.31□□□□□ -2.2
GRIN3BO60391 RNA5SP255-201ENST00000516370 107 ntBASIC1.31□□□□□ -2.2
GRIN3BO60391 RNU6-135P-201ENST00000516769 101 ntBASIC1.31□□□□□ -2.2
GRIN3BO60391 RNU6V-201ENST00000384105 107 ntBASIC1.3□□□□□ -2.2
GRIN3BO60391 MIR532-201ENST00000385025 91 ntBASIC1.3□□□□□ -2.2
GRIN3BO60391 RNU6-1089P-201ENST00000516473 104 ntBASIC1.3□□□□□ -2.2
GRIN3BO60391 RNA5SP147-201ENST00000516493 109 ntBASIC1.3□□□□□ -2.2
GRIN3BO60391 MIR3973-201ENST00000579824 107 ntBASIC1.3□□□□□ -2.2
GRIN3BO60391 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.3□□□□□ -2.2
GRIN3BO60391 RNU6-92P-201ENST00000605893 104 ntBASIC1.3□□□□□ -2.2
GRIN3BO60391 MIR6739-201ENST00000622461 75 ntBASIC1.3□□□□□ -2.2
GRIN3BO60391 RNU6-1312P-201ENST00000362425 108 ntBASIC1.29□□□□□ -2.2
GRIN3BO60391 SNORA2.1-201ENST00000363089 137 ntBASIC1.29□□□□□ -2.2
GRIN3BO60391 RNU6-808P-201ENST00000391233 108 ntBASIC1.29□□□□□ -2.2
GRIN3BO60391 MIR8087-201ENST00000612745 78 ntBASIC1.29□□□□□ -2.2
GRIN3BO60391 RNA5SP117-201ENST00000365294 118 ntBASIC1.28□□□□□ -2.2
GRIN3BO60391 MIR573-201ENST00000384964 99 ntBASIC1.28□□□□□ -2.2
GRIN3BO60391 AL157398.1-201ENST00000452981 186 ntBASIC1.28□□□□□ -2.2
GRIN3BO60391 RNU7-104P-201ENST00000459398 79 ntBASIC1.28□□□□□ -2.2
GRIN3BO60391 RNA5SP215-201ENST00000363440 122 ntBASIC1.27□□□□□ -2.21
GRIN3BO60391 MIR936-201ENST00000401264 98 ntBASIC1.27□□□□□ -2.21
GRIN3BO60391 U4.4-201ENST00000620626 117 ntBASIC1.27□□□□□ -2.21
GRIN3BO60391 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
GRIN3BO60391 MIR630-201ENST00000384957 97 ntBASIC1.26□□□□□ -2.21
GRIN3BO60391 MIR4714-201ENST00000580728 77 ntBASIC1.26□□□□□ -2.21
GRIN3BO60391 MIR548V-201ENST00000584165 80 ntBASIC1.26□□□□□ -2.21
GRIN3BO60391 MIR548AD-201ENST00000584780 82 ntBASIC1.26□□□□□ -2.21
GRIN3BO60391 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
GRIN3BO60391 RNU6-35P-201ENST00000384530 107 ntBASIC1.25□□□□□ -2.21
GRIN3BO60391 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.25□□□□□ -2.21
GRIN3BO60391 RNU6-1335P-201ENST00000365426 107 ntBASIC1.24□□□□□ -2.21
GRIN3BO60391 MT-TY-201ENST00000387409 66 ntBASIC1.24□□□□□ -2.21
GRIN3BO60391 SNORD41.1-201ENST00000391000 69 ntBASIC1.24□□□□□ -2.21
GRIN3BO60391 RNU7-174P-201ENST00000516248 59 ntBASIC1.24□□□□□ -2.21
GRIN3BO60391 RNU6-980P-201ENST00000516925 103 ntBASIC1.24□□□□□ -2.21
GRIN3BO60391 SNORD114-21-201ENST00000606412 72 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms