Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RNU6-502P-201ENST00000362419 108 ntBASIC-1.05□□□□□ -2.58
CUX2O14529 SNORD45B-201ENST00000364617 72 ntBASIC-1.05□□□□□ -2.58
CUX2O14529 RNU6-973P-201ENST00000364690 107 ntBASIC-1.05□□□□□ -2.58
CUX2O14529 SNORD83B-201ENST00000386745 93 ntBASIC-1.05□□□□□ -2.58
CUX2O14529 MIR548U-201ENST00000390728 81 ntBASIC-1.05□□□□□ -2.58
CUX2O14529 MTND4LP9-201ENST00000427694 174 ntBASIC-1.05□□□□□ -2.58
CUX2O14529 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.05□□□□□ -2.58
CUX2O14529 MIR548E-201ENST00000408287 88 ntBASIC-1.05□□□□□ -2.58
CUX2O14529 MTND5P41-201ENST00000517498 206 ntBASIC-1.05□□□□□ -2.58
CUX2O14529 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.06□□□□□ -2.58
CUX2O14529 MIR6854-201ENST00000614935 69 ntBASIC-1.06□□□□□ -2.58
CUX2O14529 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.07□□□□□ -2.58
CUX2O14529 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.07□□□□□ -2.58
CUX2O14529 RNU6-886P-201ENST00000384319 105 ntBASIC-1.07□□□□□ -2.58
CUX2O14529 RNU6-476P-201ENST00000384726 107 ntBASIC-1.07□□□□□ -2.58
CUX2O14529 RNU6-644P-201ENST00000391155 98 ntBASIC-1.07□□□□□ -2.58
CUX2O14529 MIR582-201ENST00000365731 98 ntBASIC-1.08□□□□□ -2.58
CUX2O14529 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.08□□□□□ -2.58
CUX2O14529 RNU7-85P-201ENST00000458851 63 ntBASIC-1.08□□□□□ -2.58
CUX2O14529 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.08□□□□□ -2.58
CUX2O14529 MIR548Z-201ENST00000584743 97 ntBASIC-1.08□□□□□ -2.58
CUX2O14529 SNORD74.6-201ENST00000364796 70 ntBASIC-1.09□□□□□ -2.58
CUX2O14529 RNU6-813P-201ENST00000384691 107 ntBASIC-1.09□□□□□ -2.58
CUX2O14529 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.09□□□□□ -2.58
CUX2O14529 MIR1285-2-201ENST00000408311 88 ntBASIC-1.09□□□□□ -2.58
CUX2O14529 MIR3179-1-201ENST00000578940 84 ntBASIC-1.09□□□□□ -2.58
CUX2O14529 MIR3179-2-201ENST00000579107 84 ntBASIC-1.09□□□□□ -2.58
CUX2O14529 MIR3179-3-201ENST00000579566 84 ntBASIC-1.09□□□□□ -2.58
CUX2O14529 MIR3179-4-201ENST00000617599 84 ntBASIC-1.09□□□□□ -2.58
CUX2O14529 AC099654.10-201ENST00000640395 161 ntBASIC-1.09□□□□□ -2.58
CUX2O14529 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.1□□□□□ -2.59
CUX2O14529 SNORA63.2-201ENST00000362603 126 ntBASIC-1.1□□□□□ -2.59
CUX2O14529 MIR548A1-201ENST00000385041 97 ntBASIC-1.1□□□□□ -2.59
CUX2O14529 MIR5009-201ENST00000578736 100 ntBASIC-1.1□□□□□ -2.59
CUX2O14529 MIR3613-201ENST00000579844 87 ntBASIC-1.1□□□□□ -2.59
CUX2O14529 RNU6-495P-201ENST00000362995 107 ntBASIC-1.11□□□□□ -2.59
CUX2O14529 RNU6-772P-201ENST00000516042 105 ntBASIC-1.11□□□□□ -2.59
CUX2O14529 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.12□□□□□ -2.59
CUX2O14529 RNU6-132P-201ENST00000383863 107 ntBASIC-1.12□□□□□ -2.59
CUX2O14529 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.12□□□□□ -2.59
CUX2O14529 RNU6-881P-201ENST00000516813 102 ntBASIC-1.12□□□□□ -2.59
CUX2O14529 MIR3140-201ENST00000583685 90 ntBASIC-1.12□□□□□ -2.59
CUX2O14529 AC103810.7-201ENST00000607821 91 ntBASIC-1.12□□□□□ -2.59
CUX2O14529 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.12□□□□□ -2.59
CUX2O14529 AC097510.1-201ENST00000510945 133 ntBASIC-1.12□□□□□ -2.59
CUX2O14529 RNA5SP461-201ENST00000516451 104 ntBASIC-1.12□□□□□ -2.59
CUX2O14529 RNU4-36P-201ENST00000364294 144 ntBASIC-1.13□□□□□ -2.59
CUX2O14529 RNU6-519P-201ENST00000410590 108 ntBASIC-1.13□□□□□ -2.59
CUX2O14529 SNORD4B-201ENST00000459083 72 ntBASIC-1.13□□□□□ -2.59
CUX2O14529 SNORD22.1-201ENST00000516331 125 ntBASIC-1.13□□□□□ -2.59
CUX2O14529 MIR5704-201ENST00000584029 77 ntBASIC-1.13□□□□□ -2.59
CUX2O14529 AL035470.1-201ENST00000622571 220 ntBASIC-1.13□□□□□ -2.59
CUX2O14529 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.14□□□□□ -2.59
CUX2O14529 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.14□□□□□ -2.59
CUX2O14529 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.15□□□□□ -2.59
CUX2O14529 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.15□□□□□ -2.59
CUX2O14529 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.15□□□□□ -2.59
CUX2O14529 RNU6-721P-201ENST00000410155 105 ntBASIC-1.15□□□□□ -2.59
CUX2O14529 RNU6-257P-201ENST00000410238 98 ntBASIC-1.15□□□□□ -2.59
CUX2O14529 MTATP6P29-201ENST00000415057 132 ntBASIC-1.15□□□□□ -2.59
CUX2O14529 MIR6773-201ENST00000612812 74 ntBASIC-1.15□□□□□ -2.59
CUX2O14529 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.16□□□□□ -2.59
CUX2O14529 RNU7-200P-201ENST00000516105 62 ntBASIC-1.16□□□□□ -2.59
CUX2O14529 MIR3165-201ENST00000579874 75 ntBASIC-1.16□□□□□ -2.59
CUX2O14529 MIR3064-201ENST00000581130 66 ntBASIC-1.16□□□□□ -2.59
CUX2O14529 MIR548A3-201ENST00000385297 97 ntBASIC-1.17□□□□□ -2.6
CUX2O14529 RNU7-107P-201ENST00000459121 61 ntBASIC-1.17□□□□□ -2.6
CUX2O14529 AC022137.1-201ENST00000483735 151 ntBASIC-1.17□□□□□ -2.6
CUX2O14529 SNORA63.6-201ENST00000364921 119 ntBASIC-1.18□□□□□ -2.6
CUX2O14529 AP000533.3-201ENST00000447704 118 ntBASIC-1.18□□□□□ -2.6
CUX2O14529 MIR8068-201ENST00000618032 68 ntBASIC-1.18□□□□□ -2.6
CUX2O14529 U6.96-201ENST00000636425 70 ntBASIC-1.18□□□□□ -2.6
CUX2O14529 RNY4P27-201ENST00000363341 96 ntBASIC-1.18□□□□□ -2.6
CUX2O14529 RNA5SP192-201ENST00000364404 120 ntBASIC-1.18□□□□□ -2.6
CUX2O14529 RNU6-80P-201ENST00000384195 107 ntBASIC-1.18□□□□□ -2.6
CUX2O14529 RNU6-24P-201ENST00000384440 107 ntBASIC-1.18□□□□□ -2.6
CUX2O14529 SNORD18.2-201ENST00000459604 70 ntBASIC-1.18□□□□□ -2.6
CUX2O14529 AC104996.3-201ENST00000590718 94 ntBASIC-1.18□□□□□ -2.6
CUX2O14529 SNORD114-25-201ENST00000363742 72 ntBASIC-1.19□□□□□ -2.6
CUX2O14529 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.19□□□□□ -2.6
CUX2O14529 RNU7-24P-201ENST00000458867 62 ntBASIC-1.19□□□□□ -2.6
CUX2O14529 RNU6-62P-201ENST00000516526 102 ntBASIC-1.19□□□□□ -2.6
CUX2O14529 RNU6-971P-201ENST00000516920 106 ntBASIC-1.19□□□□□ -2.6
CUX2O14529 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.2□□□□□ -2.6
CUX2O14529 MIR517B-201ENST00000385102 67 ntBASIC-1.2□□□□□ -2.6
CUX2O14529 RNU6-337P-201ENST00000391243 106 ntBASIC-1.2□□□□□ -2.6
CUX2O14529 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.2□□□□□ -2.6
CUX2O14529 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.21□□□□□ -2.6
CUX2O14529 RNA5SP470-201ENST00000516463 106 ntBASIC-1.21□□□□□ -2.6
CUX2O14529 SNORA18.5-201ENST00000516616 101 ntBASIC-1.21□□□□□ -2.6
CUX2O14529 YWHAEP3-201ENST00000582767 121 ntBASIC-1.21□□□□□ -2.6
CUX2O14529 RNU6-260P-201ENST00000384092 107 ntBASIC-1.22□□□□□ -2.6
CUX2O14529 AC006254.2-201ENST00000603259 279 ntBASIC-1.22□□□□□ -2.6
CUX2O14529 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.23□□□□□ -2.61
CUX2O14529 SNORA62.4-201ENST00000365504 151 ntBASIC-1.23□□□□□ -2.61
CUX2O14529 SNORD75.2-201ENST00000408784 58 ntBASIC-1.23□□□□□ -2.61
CUX2O14529 AL500527.2-201ENST00000454105 95 ntBASIC-1.23□□□□□ -2.61
CUX2O14529 RNU6-795P-201ENST00000516323 103 ntBASIC-1.23□□□□□ -2.61
CUX2O14529 RNU6-158P-201ENST00000517104 100 ntBASIC-1.23□□□□□ -2.61
CUX2O14529 MIR4777-201ENST00000583710 86 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 264.9 ms