Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNU6-1039P-201ENST00000383931 107 ntBASIC1.28□□□□□ -2.2
SOX1O00570 RNU6-800P-201ENST00000384473 103 ntBASIC1.28□□□□□ -2.2
SOX1O00570 SNORD45A-201ENST00000384512 84 ntBASIC1.28□□□□□ -2.2
SOX1O00570 RNA5SP255-201ENST00000516370 107 ntBASIC1.28□□□□□ -2.2
SOX1O00570 MIR26B-201ENST00000362251 77 ntBASIC1.27□□□□□ -2.21
SOX1O00570 Y_RNA.340-201ENST00000365330 92 ntBASIC1.27□□□□□ -2.21
SOX1O00570 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SOX1O00570 Y_RNA.386-201ENST00000383913 105 ntBASIC1.27□□□□□ -2.21
SOX1O00570 MIR618-201ENST00000385287 98 ntBASIC1.27□□□□□ -2.21
SOX1O00570 RNU6-881P-201ENST00000516813 102 ntBASIC1.27□□□□□ -2.21
SOX1O00570 SCARNA16.5-201ENST00000517114 183 ntBASIC1.27□□□□□ -2.21
SOX1O00570 NAMPTP3-201ENST00000569273 224 ntBASIC1.27□□□□□ -2.21
SOX1O00570 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.27□□□□□ -2.21
SOX1O00570 RNU6V-201ENST00000384105 107 ntBASIC1.26□□□□□ -2.21
SOX1O00570 MT-TY-201ENST00000387409 66 ntBASIC1.26□□□□□ -2.21
SOX1O00570 MIR4460-201ENST00000577862 86 ntBASIC1.26□□□□□ -2.21
SOX1O00570 MIR6509-201ENST00000614603 85 ntBASIC1.26□□□□□ -2.21
SOX1O00570 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
SOX1O00570 RNU6-1216P-201ENST00000362590 107 ntBASIC1.25□□□□□ -2.21
SOX1O00570 SNORD113.1-201ENST00000363280 73 ntBASIC1.25□□□□□ -2.21
SOX1O00570 RNU6-54P-201ENST00000365563 107 ntBASIC1.25□□□□□ -2.21
SOX1O00570 RNU6-716P-201ENST00000365621 103 ntBASIC1.25□□□□□ -2.21
SOX1O00570 RNU6-604P-201ENST00000390917 100 ntBASIC1.25□□□□□ -2.21
SOX1O00570 MIR3973-201ENST00000579824 107 ntBASIC1.25□□□□□ -2.21
SOX1O00570 MIR6086-201ENST00000638065 55 ntBASIC1.25□□□□□ -2.21
SOX1O00570 RNU1-141P-201ENST00000364623 158 ntBASIC1.24□□□□□ -2.21
SOX1O00570 SNORA8.2-201ENST00000384372 139 ntBASIC1.24□□□□□ -2.21
SOX1O00570 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.24□□□□□ -2.21
SOX1O00570 MIR6828-201ENST00000636181 60 ntBASIC1.24□□□□□ -2.21
SOX1O00570 RNU4-45P-201ENST00000365469 141 ntBASIC1.23□□□□□ -2.21
SOX1O00570 RNU6-269P-201ENST00000391077 97 ntBASIC1.23□□□□□ -2.21
SOX1O00570 SNORD99-201ENST00000408612 74 ntBASIC1.23□□□□□ -2.21
SOX1O00570 AC011195.1-201ENST00000578177 177 ntBASIC1.23□□□□□ -2.21
SOX1O00570 MIR18A-201ENST00000362310 71 ntBASIC1.22□□□□□ -2.21
SOX1O00570 RNU6-630P-201ENST00000391258 106 ntBASIC1.22□□□□□ -2.21
SOX1O00570 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.22□□□□□ -2.21
SOX1O00570 MIR4714-201ENST00000580728 77 ntBASIC1.22□□□□□ -2.21
SOX1O00570 MIR8087-201ENST00000612745 78 ntBASIC1.22□□□□□ -2.21
SOX1O00570 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
SOX1O00570 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.22□□□□□ -2.21
SOX1O00570 RNU6-471P-201ENST00000383944 106 ntBASIC1.21□□□□□ -2.22
SOX1O00570 RNU6-260P-201ENST00000384092 107 ntBASIC1.21□□□□□ -2.22
SOX1O00570 MIR1265-201ENST00000408444 86 ntBASIC1.21□□□□□ -2.22
SOX1O00570 AC098934.3-201ENST00000430450 190 ntBASIC1.21□□□□□ -2.22
SOX1O00570 SNORD42B-201ENST00000458893 67 ntBASIC1.21□□□□□ -2.22
SOX1O00570 AL627230.5-201ENST00000619807 58 ntBASIC1.21□□□□□ -2.22
SOX1O00570 SNORD114-23-201ENST00000363536 72 ntBASIC1.2□□□□□ -2.22
SOX1O00570 AC005520.4-201ENST00000604337 90 ntBASIC1.2□□□□□ -2.22
SOX1O00570 AL162376.1-201ENST00000624117 175 ntBASIC1.2□□□□□ -2.22
SOX1O00570 AC010487.4-201ENST00000637027 61 ntBASIC1.2□□□□□ -2.22
SOX1O00570 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
SOX1O00570 SNORD114-4-201ENST00000363962 75 ntBASIC1.19□□□□□ -2.22
SOX1O00570 Y_RNA.443-201ENST00000384135 111 ntBASIC1.19□□□□□ -2.22
SOX1O00570 MIR203A-201ENST00000384836 110 ntBASIC1.19□□□□□ -2.22
SOX1O00570 MIR758-201ENST00000390227 88 ntBASIC1.19□□□□□ -2.22
SOX1O00570 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
SOX1O00570 MIR7974-201ENST00000615835 79 ntBASIC1.19□□□□□ -2.22
SOX1O00570 SNORA25.4-201ENST00000363666 124 ntBASIC1.18□□□□□ -2.22
SOX1O00570 SNORD116-24-201ENST00000384549 92 ntBASIC1.18□□□□□ -2.22
SOX1O00570 RNA5SP227-201ENST00000516184 113 ntBASIC1.18□□□□□ -2.22
SOX1O00570 MIR3657-201ENST00000584818 117 ntBASIC1.18□□□□□ -2.22
SOX1O00570 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.18□□□□□ -2.22
SOX1O00570 AC069503.3-201ENST00000618674 145 ntBASIC1.18□□□□□ -2.22
SOX1O00570 AC073869.9-201ENST00000641610 120 ntBASIC1.18□□□□□ -2.22
SOX1O00570 MIR936-201ENST00000401264 98 ntBASIC1.17□□□□□ -2.22
SOX1O00570 MIR6513-201ENST00000621188 64 ntBASIC1.17□□□□□ -2.22
SOX1O00570 MIR150-201ENST00000385048 84 ntBASIC1.16□□□□□ -2.22
SOX1O00570 MIR1197-201ENST00000408818 88 ntBASIC1.16□□□□□ -2.22
SOX1O00570 RNA5SP268-201ENST00000516828 124 ntBASIC1.16□□□□□ -2.22
SOX1O00570 SNORA36.1-201ENST00000363424 132 ntBASIC1.15□□□□□ -2.23
SOX1O00570 MTND4LP1-201ENST00000446263 157 ntBASIC1.15□□□□□ -2.23
SOX1O00570 RNA5SP484-201ENST00000458857 111 ntBASIC1.15□□□□□ -2.23
SOX1O00570 RNU5B-6P-201ENST00000516765 68 ntBASIC1.15□□□□□ -2.23
SOX1O00570 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
SOX1O00570 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.14□□□□□ -2.23
SOX1O00570 RNU6-982P-201ENST00000516216 102 ntBASIC1.14□□□□□ -2.23
SOX1O00570 MIR330-201ENST00000362196 94 ntBASIC1.13□□□□□ -2.23
SOX1O00570 SNORA2.1-201ENST00000363089 137 ntBASIC1.13□□□□□ -2.23
SOX1O00570 RNA5SP94-201ENST00000516917 108 ntBASIC1.13□□□□□ -2.23
SOX1O00570 AL353765.1-201ENST00000605514 183 ntBASIC1.13□□□□□ -2.23
SOX1O00570 VTRNA1-3-201ENST00000365645 89 ntBASIC1.12□□□□□ -2.23
SOX1O00570 RNU6-939P-201ENST00000384634 107 ntBASIC1.12□□□□□ -2.23
SOX1O00570 RNA5SP222-201ENST00000411039 105 ntBASIC1.12□□□□□ -2.23
SOX1O00570 AC018659.1-201ENST00000551083 169 ntBASIC1.12□□□□□ -2.23
SOX1O00570 MIR2909-201ENST00000617113 69 ntBASIC1.12□□□□□ -2.23
SOX1O00570 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
SOX1O00570 RNU6-668P-201ENST00000364180 107 ntBASIC1.11□□□□□ -2.23
SOX1O00570 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.11□□□□□ -2.23
SOX1O00570 MIR4661-201ENST00000582720 75 ntBASIC1.11□□□□□ -2.23
SOX1O00570 SNORD114-21-201ENST00000606412 72 ntBASIC1.11□□□□□ -2.23
SOX1O00570 MIR532-201ENST00000385025 91 ntBASIC1.1□□□□□ -2.23
SOX1O00570 MIR4698-201ENST00000577795 80 ntBASIC1.1□□□□□ -2.23
SOX1O00570 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SOX1O00570 RNU6-990P-201ENST00000364385 104 ntBASIC1.09□□□□□ -2.23
SOX1O00570 RNU6-645P-201ENST00000364649 106 ntBASIC1.09□□□□□ -2.23
SOX1O00570 RNA5SP193-201ENST00000410353 107 ntBASIC1.09□□□□□ -2.23
SOX1O00570 AC103706.3-201ENST00000636297 85 ntBASIC1.09□□□□□ -2.23
SOX1O00570 Y_RNA.250-201ENST00000364542 110 ntBASIC1.08□□□□□ -2.24
SOX1O00570 MIR4511-201ENST00000582784 87 ntBASIC1.08□□□□□ -2.24
SOX1O00570 MIR7107-201ENST00000611489 80 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 419.3 ms