Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
CLRN2A0PK11 RNU7-24P-201ENST00000458867 62 ntBASIC-0.98□□□□□ -2.57
CLRN2A0PK11 RNY3P2-201ENST00000362918 102 ntBASIC-0.99□□□□□ -2.57
CLRN2A0PK11 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.99□□□□□ -2.57
CLRN2A0PK11 SNORD116-18-201ENST00000383961 92 ntBASIC-0.99□□□□□ -2.57
CLRN2A0PK11 RNU6-574P-201ENST00000384265 107 ntBASIC-0.99□□□□□ -2.57
CLRN2A0PK11 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.99□□□□□ -2.57
CLRN2A0PK11 AP000533.3-201ENST00000447704 118 ntBASIC-0.99□□□□□ -2.57
CLRN2A0PK11 MIR3613-201ENST00000579844 87 ntBASIC-0.99□□□□□ -2.57
CLRN2A0PK11 AC004792.1-201ENST00000614523 137 ntBASIC-0.99□□□□□ -2.57
CLRN2A0PK11 MIR365A-201ENST00000362260 87 ntBASIC-1□□□□□ -2.57
CLRN2A0PK11 RNU6-463P-201ENST00000384340 107 ntBASIC-1□□□□□ -2.57
CLRN2A0PK11 MIR517B-201ENST00000385102 67 ntBASIC-1□□□□□ -2.57
CLRN2A0PK11 SCARNA15.1-201ENST00000516384 125 ntBASIC-1□□□□□ -2.57
CLRN2A0PK11 RNU6-158P-201ENST00000517104 100 ntBASIC-1□□□□□ -2.57
CLRN2A0PK11 MIR3064-201ENST00000581130 66 ntBASIC-1□□□□□ -2.57
CLRN2A0PK11 snoR1.1-201ENST00000628177 80 ntBASIC-1□□□□□ -2.57
CLRN2A0PK11 RNU6-379P-201ENST00000363813 104 ntBASIC-1.01□□□□□ -2.57
CLRN2A0PK11 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.01□□□□□ -2.57
CLRN2A0PK11 RNA5SP192-201ENST00000364404 120 ntBASIC-1.01□□□□□ -2.57
CLRN2A0PK11 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.01□□□□□ -2.57
CLRN2A0PK11 RNU6-644P-201ENST00000391155 98 ntBASIC-1.01□□□□□ -2.57
CLRN2A0PK11 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.01□□□□□ -2.57
CLRN2A0PK11 MIR3144-201ENST00000579460 79 ntBASIC-1.01□□□□□ -2.57
CLRN2A0PK11 YWHAEP3-201ENST00000582767 121 ntBASIC-1.01□□□□□ -2.57
CLRN2A0PK11 MIR3140-201ENST00000583685 90 ntBASIC-1.01□□□□□ -2.57
CLRN2A0PK11 RNU6-694P-201ENST00000364071 147 ntBASIC-1.02□□□□□ -2.57
CLRN2A0PK11 RNU6-905P-201ENST00000384434 107 ntBASIC-1.02□□□□□ -2.57
CLRN2A0PK11 SNORD83B-201ENST00000386745 93 ntBASIC-1.02□□□□□ -2.57
CLRN2A0PK11 MIR548U-201ENST00000390728 81 ntBASIC-1.02□□□□□ -2.57
CLRN2A0PK11 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.02□□□□□ -2.57
CLRN2A0PK11 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.02□□□□□ -2.57
CLRN2A0PK11 AC068339.1-201ENST00000526965 141 ntBASIC-1.02□□□□□ -2.57
CLRN2A0PK11 MIR3115-201ENST00000577915 68 ntBASIC-1.02□□□□□ -2.57
CLRN2A0PK11 RNU6-804P-201ENST00000384286 107 ntBASIC-1.03□□□□□ -2.57
CLRN2A0PK11 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.03□□□□□ -2.57
CLRN2A0PK11 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.03□□□□□ -2.57
CLRN2A0PK11 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.03□□□□□ -2.57
CLRN2A0PK11 SNORD4B-201ENST00000459083 72 ntBASIC-1.03□□□□□ -2.57
CLRN2A0PK11 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.03□□□□□ -2.57
CLRN2A0PK11 SNORD114-25-201ENST00000363742 72 ntBASIC-1.04□□□□□ -2.58
CLRN2A0PK11 SNORA62.4-201ENST00000365504 151 ntBASIC-1.04□□□□□ -2.58
CLRN2A0PK11 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.04□□□□□ -2.58
CLRN2A0PK11 MIR147A-201ENST00000385079 72 ntBASIC-1.04□□□□□ -2.58
CLRN2A0PK11 MT-TG-201ENST00000387429 68 ntBASIC-1.04□□□□□ -2.58
CLRN2A0PK11 MIR1285-2-201ENST00000408311 88 ntBASIC-1.04□□□□□ -2.58
CLRN2A0PK11 SNORD75.2-201ENST00000408784 58 ntBASIC-1.04□□□□□ -2.58
CLRN2A0PK11 AC104996.3-201ENST00000590718 94 ntBASIC-1.04□□□□□ -2.58
CLRN2A0PK11 AL035470.1-201ENST00000622571 220 ntBASIC-1.04□□□□□ -2.58
CLRN2A0PK11 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.05□□□□□ -2.58
CLRN2A0PK11 RNU6-990P-201ENST00000364385 104 ntBASIC-1.05□□□□□ -2.58
CLRN2A0PK11 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.05□□□□□ -2.58
CLRN2A0PK11 RNU6-813P-201ENST00000384691 107 ntBASIC-1.05□□□□□ -2.58
CLRN2A0PK11 RNU6-62P-201ENST00000516526 102 ntBASIC-1.05□□□□□ -2.58
CLRN2A0PK11 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.05□□□□□ -2.58
CLRN2A0PK11 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.06□□□□□ -2.58
CLRN2A0PK11 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.06□□□□□ -2.58
CLRN2A0PK11 SNORD45B-201ENST00000364617 72 ntBASIC-1.06□□□□□ -2.58
CLRN2A0PK11 RNU6-431P-201ENST00000383874 107 ntBASIC-1.06□□□□□ -2.58
CLRN2A0PK11 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.06□□□□□ -2.58
CLRN2A0PK11 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.07□□□□□ -2.58
CLRN2A0PK11 MIR548A1-201ENST00000385041 97 ntBASIC-1.07□□□□□ -2.58
CLRN2A0PK11 RNU6-388P-201ENST00000517012 105 ntBASIC-1.07□□□□□ -2.58
CLRN2A0PK11 RNU6-389P-201ENST00000517048 105 ntBASIC-1.07□□□□□ -2.58
CLRN2A0PK11 AC103810.7-201ENST00000607821 91 ntBASIC-1.07□□□□□ -2.58
CLRN2A0PK11 SNORD64-201ENST00000386683 67 ntBASIC-1.08□□□□□ -2.58
CLRN2A0PK11 MTND4LP9-201ENST00000427694 174 ntBASIC-1.08□□□□□ -2.58
CLRN2A0PK11 AL500527.2-201ENST00000454105 95 ntBASIC-1.08□□□□□ -2.58
CLRN2A0PK11 RNA5SP272-201ENST00000516095 111 ntBASIC-1.08□□□□□ -2.58
CLRN2A0PK11 MIR3165-201ENST00000579874 75 ntBASIC-1.08□□□□□ -2.58
CLRN2A0PK11 MIR4441-201ENST00000582623 100 ntBASIC-1.08□□□□□ -2.58
CLRN2A0PK11 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.09□□□□□ -2.58
CLRN2A0PK11 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.09□□□□□ -2.58
CLRN2A0PK11 SNORD18.2-201ENST00000459604 70 ntBASIC-1.09□□□□□ -2.58
CLRN2A0PK11 AC021146.9-201ENST00000512503 156 ntBASIC-1.09□□□□□ -2.58
CLRN2A0PK11 RNU6-772P-201ENST00000516042 105 ntBASIC-1.09□□□□□ -2.58
CLRN2A0PK11 RNA5SP470-201ENST00000516463 106 ntBASIC-1.09□□□□□ -2.58
CLRN2A0PK11 MIR5009-201ENST00000578736 100 ntBASIC-1.09□□□□□ -2.58
CLRN2A0PK11 MIR4464-201ENST00000580818 92 ntBASIC-1.09□□□□□ -2.58
CLRN2A0PK11 AC090617.8-201ENST00000623339 167 ntBASIC-1.09□□□□□ -2.58
CLRN2A0PK11 AL157777.2-201ENST00000258070 137 ntBASIC-1.1□□□□□ -2.59
CLRN2A0PK11 RNU6-208P-201ENST00000362431 107 ntBASIC-1.1□□□□□ -2.59
CLRN2A0PK11 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.1□□□□□ -2.59
CLRN2A0PK11 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.1□□□□□ -2.59
CLRN2A0PK11 RNU6-426P-201ENST00000516464 97 ntBASIC-1.1□□□□□ -2.59
CLRN2A0PK11 MTND5P41-201ENST00000517498 206 ntBASIC-1.1□□□□□ -2.59
CLRN2A0PK11 MIR4777-201ENST00000583710 86 ntBASIC-1.1□□□□□ -2.59
CLRN2A0PK11 MIR548Z-201ENST00000584743 97 ntBASIC-1.1□□□□□ -2.59
CLRN2A0PK11 AL353621.2-201ENST00000605340 133 ntBASIC-1.1□□□□□ -2.59
CLRN2A0PK11 U6.96-201ENST00000636425 70 ntBASIC-1.1□□□□□ -2.59
CLRN2A0PK11 RNU6-24P-201ENST00000384440 107 ntBASIC-1.11□□□□□ -2.59
CLRN2A0PK11 RNA5SP292-201ENST00000390974 118 ntBASIC-1.11□□□□□ -2.59
CLRN2A0PK11 SNORD90-201ENST00000391145 111 ntBASIC-1.11□□□□□ -2.59
CLRN2A0PK11 MIR382-201ENST00000637119 76 ntBASIC-1.11□□□□□ -2.59
CLRN2A0PK11 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.11□□□□□ -2.59
CLRN2A0PK11 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.12□□□□□ -2.59
CLRN2A0PK11 RNU6-260P-201ENST00000384092 107 ntBASIC-1.12□□□□□ -2.59
CLRN2A0PK11 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.12□□□□□ -2.59
CLRN2A0PK11 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.12□□□□□ -2.59
CLRN2A0PK11 MIR124-2-201ENST00000385081 109 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 228.2 ms