Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 Y_RNA.660-201ENST00000516002 120 ntBASIC0.05□□□□□ -2.4
TCRBV7S3A2A0A539 RNU6-180P-201ENST00000516697 61 ntBASIC0.05□□□□□ -2.4
TCRBV7S3A2A0A539 MIR6718-201ENST00000616153 80 ntBASIC0.05□□□□□ -2.4
TCRBV7S3A2A0A539 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.05□□□□□ -2.4
TCRBV7S3A2A0A539 RNU5F-1-201ENST00000362507 117 ntBASIC0.04□□□□□ -2.4
TCRBV7S3A2A0A539 RNU7-188P-201ENST00000517063 64 ntBASIC0.04□□□□□ -2.4
TCRBV7S3A2A0A539 MIR4290-201ENST00000583807 95 ntBASIC0.04□□□□□ -2.4
TCRBV7S3A2A0A539 MIR593-201ENST00000384856 100 ntBASIC0.03□□□□□ -2.4
TCRBV7S3A2A0A539 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
TCRBV7S3A2A0A539 SNORD42B-201ENST00000458893 67 ntBASIC0.03□□□□□ -2.4
TCRBV7S3A2A0A539 SCARNA17.3-201ENST00000516381 125 ntBASIC0.03□□□□□ -2.4
TCRBV7S3A2A0A539 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
TCRBV7S3A2A0A539 MIR371B-201ENST00000638082 66 ntBASIC0.03□□□□□ -2.4
TCRBV7S3A2A0A539 MIR20A-201ENST00000362279 71 ntBASIC0.02□□□□□ -2.41
TCRBV7S3A2A0A539 SNORD114-26-201ENST00000363543 72 ntBASIC0.02□□□□□ -2.41
TCRBV7S3A2A0A539 SNORD115-37-201ENST00000363768 82 ntBASIC0.02□□□□□ -2.41
TCRBV7S3A2A0A539 RNY4P30-201ENST00000410216 95 ntBASIC0.02□□□□□ -2.41
TCRBV7S3A2A0A539 AC244090.1-201ENST00000441884 93 ntBASIC0.02□□□□□ -2.41
TCRBV7S3A2A0A539 snoU13.17-201ENST00000458802 104 ntBASIC0.02□□□□□ -2.41
TCRBV7S3A2A0A539 RNU7-165P-201ENST00000458864 60 ntBASIC0.02□□□□□ -2.41
TCRBV7S3A2A0A539 AC097510.1-201ENST00000510945 133 ntBASIC0.02□□□□□ -2.41
TCRBV7S3A2A0A539 AC093729.1-201ENST00000513074 128 ntBASIC0.02□□□□□ -2.41
TCRBV7S3A2A0A539 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.02□□□□□ -2.41
TCRBV7S3A2A0A539 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
TCRBV7S3A2A0A539 MIR106A-201ENST00000384870 81 ntBASIC0.01□□□□□ -2.41
TCRBV7S3A2A0A539 SNORD75.2-201ENST00000408784 58 ntBASIC0.01□□□□□ -2.41
TCRBV7S3A2A0A539 RNU6-267P-201ENST00000516714 103 ntBASIC0.01□□□□□ -2.41
TCRBV7S3A2A0A539 CR383656.4-201ENST00000546909 122 ntBASIC0.01□□□□□ -2.41
TCRBV7S3A2A0A539 RN7SL660P-201ENST00000614852 299 ntBASIC0.01□□□□□ -2.41
TCRBV7S3A2A0A539 Y_RNA.17-201ENST00000362433 111 ntBASIC0□□□□□ -2.41
TCRBV7S3A2A0A539 SNORD114-5-201ENST00000362928 70 ntBASIC0□□□□□ -2.41
TCRBV7S3A2A0A539 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
TCRBV7S3A2A0A539 Y_RNA.258-201ENST00000364613 105 ntBASIC0□□□□□ -2.41
TCRBV7S3A2A0A539 RNU6-175P-201ENST00000516896 107 ntBASIC0□□□□□ -2.41
TCRBV7S3A2A0A539 MIR4514-201ENST00000581410 57 ntBASIC0□□□□□ -2.41
TCRBV7S3A2A0A539 MIR148A-201ENST00000362215 68 ntBASIC-0.01□□□□□ -2.41
TCRBV7S3A2A0A539 MIR193B-201ENST00000384907 83 ntBASIC-0.01□□□□□ -2.41
TCRBV7S3A2A0A539 RNA5SP163-201ENST00000410304 99 ntBASIC-0.01□□□□□ -2.41
TCRBV7S3A2A0A539 RNU7-159P-201ENST00000459284 62 ntBASIC-0.01□□□□□ -2.41
TCRBV7S3A2A0A539 MIR548BB-201ENST00000626714 66 ntBASIC-0.01□□□□□ -2.41
TCRBV7S3A2A0A539 RNU6-624P-201ENST00000363411 107 ntBASIC-0.02□□□□□ -2.41
TCRBV7S3A2A0A539 AC140658.3-201ENST00000567603 271 ntBASIC-0.02□□□□□ -2.41
TCRBV7S3A2A0A539 RN7SL793P-201ENST00000583259 296 ntBASIC-0.02□□□□□ -2.41
TCRBV7S3A2A0A539 AC023932.2-201ENST00000603176 175 ntBASIC-0.02□□□□□ -2.41
TCRBV7S3A2A0A539 AC006254.2-201ENST00000603259 279 ntBASIC-0.02□□□□□ -2.41
TCRBV7S3A2A0A539 MIR6514-201ENST00000622549 70 ntBASIC-0.02□□□□□ -2.41
TCRBV7S3A2A0A539 RNU6-824P-201ENST00000363724 104 ntBASIC-0.03□□□□□ -2.41
TCRBV7S3A2A0A539 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.03□□□□□ -2.41
TCRBV7S3A2A0A539 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.03□□□□□ -2.41
TCRBV7S3A2A0A539 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.03□□□□□ -2.41
TCRBV7S3A2A0A539 RNU6-762P-201ENST00000517107 102 ntBASIC-0.03□□□□□ -2.41
TCRBV7S3A2A0A539 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.04□□□□□ -2.42
TCRBV7S3A2A0A539 RNU6-592P-201ENST00000411333 103 ntBASIC-0.04□□□□□ -2.42
TCRBV7S3A2A0A539 MIR5582-201ENST00000579697 68 ntBASIC-0.04□□□□□ -2.42
TCRBV7S3A2A0A539 U6.81-201ENST00000612550 106 ntBASIC-0.04□□□□□ -2.42
TCRBV7S3A2A0A539 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.05□□□□□ -2.42
TCRBV7S3A2A0A539 RNU6-382P-201ENST00000365181 106 ntBASIC-0.05□□□□□ -2.42
TCRBV7S3A2A0A539 AL450471.1-201ENST00000447509 127 ntBASIC-0.05□□□□□ -2.42
TCRBV7S3A2A0A539 AC104692.1-201ENST00000472406 90 ntBASIC-0.05□□□□□ -2.42
TCRBV7S3A2A0A539 MIR1273G-201ENST00000577677 100 ntBASIC-0.05□□□□□ -2.42
TCRBV7S3A2A0A539 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.06□□□□□ -2.42
TCRBV7S3A2A0A539 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.06□□□□□ -2.42
TCRBV7S3A2A0A539 SNORD77.2-201ENST00000391045 68 ntBASIC-0.06□□□□□ -2.42
TCRBV7S3A2A0A539 SNORD2-201ENST00000459163 69 ntBASIC-0.06□□□□□ -2.42
TCRBV7S3A2A0A539 RNU6-208P-201ENST00000362431 107 ntBASIC-0.07□□□□□ -2.42
TCRBV7S3A2A0A539 RNU6-294P-201ENST00000364999 102 ntBASIC-0.07□□□□□ -2.42
TCRBV7S3A2A0A539 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
TCRBV7S3A2A0A539 MIR548E-201ENST00000408287 88 ntBASIC-0.07□□□□□ -2.42
TCRBV7S3A2A0A539 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.07□□□□□ -2.42
TCRBV7S3A2A0A539 RNU6-557P-201ENST00000516842 110 ntBASIC-0.07□□□□□ -2.42
TCRBV7S3A2A0A539 MIR1295B-201ENST00000636144 60 ntBASIC-0.07□□□□□ -2.42
TCRBV7S3A2A0A539 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.07□□□□□ -2.42
TCRBV7S3A2A0A539 RNU6-302P-201ENST00000365249 107 ntBASIC-0.08□□□□□ -2.42
TCRBV7S3A2A0A539 RNA5SP63-201ENST00000391225 112 ntBASIC-0.08□□□□□ -2.42
TCRBV7S3A2A0A539 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.08□□□□□ -2.42
TCRBV7S3A2A0A539 IGLL4P-201ENST00000614590 133 ntBASIC-0.08□□□□□ -2.42
TCRBV7S3A2A0A539 AC006160.2-201ENST00000637708 154 ntBASIC-0.08□□□□□ -2.42
TCRBV7S3A2A0A539 RNA5SP98-201ENST00000363158 137 ntBASIC-0.09□□□□□ -2.42
TCRBV7S3A2A0A539 RNY1P1-201ENST00000364372 112 ntBASIC-0.09□□□□□ -2.42
TCRBV7S3A2A0A539 MIR582-201ENST00000365731 98 ntBASIC-0.09□□□□□ -2.42
TCRBV7S3A2A0A539 RNU6-46P-201ENST00000383860 107 ntBASIC-0.09□□□□□ -2.42
TCRBV7S3A2A0A539 RNU6-929P-201ENST00000384429 107 ntBASIC-0.09□□□□□ -2.42
TCRBV7S3A2A0A539 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.09□□□□□ -2.42
TCRBV7S3A2A0A539 MIR4773-1-201ENST00000637203 78 ntBASIC-0.09□□□□□ -2.42
TCRBV7S3A2A0A539 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.1□□□□□ -2.43
TCRBV7S3A2A0A539 RNA5SP170-201ENST00000517150 101 ntBASIC-0.1□□□□□ -2.43
TCRBV7S3A2A0A539 MIR8087-201ENST00000612745 78 ntBASIC-0.1□□□□□ -2.43
TCRBV7S3A2A0A539 MIR330-201ENST00000362196 94 ntBASIC-0.11□□□□□ -2.43
TCRBV7S3A2A0A539 RNU6-340P-201ENST00000364005 107 ntBASIC-0.11□□□□□ -2.43
TCRBV7S3A2A0A539 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.11□□□□□ -2.43
TCRBV7S3A2A0A539 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.11□□□□□ -2.43
TCRBV7S3A2A0A539 RNU6-274P-201ENST00000459566 107 ntBASIC-0.11□□□□□ -2.43
TCRBV7S3A2A0A539 YWHAEP3-201ENST00000582767 121 ntBASIC-0.11□□□□□ -2.43
TCRBV7S3A2A0A539 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.11□□□□□ -2.43
TCRBV7S3A2A0A539 RNU6-681P-201ENST00000364012 104 ntBASIC-0.12□□□□□ -2.43
TCRBV7S3A2A0A539 RNU6-979P-201ENST00000383896 107 ntBASIC-0.12□□□□□ -2.43
TCRBV7S3A2A0A539 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.12□□□□□ -2.43
TCRBV7S3A2A0A539 SNORA49-201ENST00000386157 136 ntBASIC-0.12□□□□□ -2.43
TCRBV7S3A2A0A539 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.12□□□□□ -2.43
TCRBV7S3A2A0A539 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms