Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RNU6-161P-201ENST00000363051 106 ntBASIC0.92□□□□□ -2.26
CTDP1Q9Y5B0 RNU6-1126P-201ENST00000384002 107 ntBASIC0.92□□□□□ -2.26
CTDP1Q9Y5B0 MIR7-2-201ENST00000384970 110 ntBASIC0.92□□□□□ -2.26
CTDP1Q9Y5B0 RNU6-1108P-201ENST00000516308 104 ntBASIC0.92□□□□□ -2.26
CTDP1Q9Y5B0 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.92□□□□□ -2.26
CTDP1Q9Y5B0 MIR6835-201ENST00000621552 64 ntBASIC0.92□□□□□ -2.26
CTDP1Q9Y5B0 RNU6-110P-201ENST00000384508 104 ntBASIC0.91□□□□□ -2.26
CTDP1Q9Y5B0 SNORD77.2-201ENST00000391045 68 ntBASIC0.91□□□□□ -2.26
CTDP1Q9Y5B0 RNU6-279P-201ENST00000391297 101 ntBASIC0.91□□□□□ -2.26
CTDP1Q9Y5B0 Y_RNA.660-201ENST00000516002 120 ntBASIC0.91□□□□□ -2.26
CTDP1Q9Y5B0 RNU6-557P-201ENST00000516842 110 ntBASIC0.91□□□□□ -2.26
CTDP1Q9Y5B0 SCARNA16.5-201ENST00000517114 183 ntBASIC0.91□□□□□ -2.26
CTDP1Q9Y5B0 MIR3140-201ENST00000583685 90 ntBASIC0.91□□□□□ -2.26
CTDP1Q9Y5B0 MIR4712-201ENST00000583750 82 ntBASIC0.91□□□□□ -2.26
CTDP1Q9Y5B0 RNU6-315P-201ENST00000362666 107 ntBASIC0.9□□□□□ -2.27
CTDP1Q9Y5B0 RNU6-478P-201ENST00000363904 110 ntBASIC0.9□□□□□ -2.27
CTDP1Q9Y5B0 RNU6-716P-201ENST00000365621 103 ntBASIC0.9□□□□□ -2.27
CTDP1Q9Y5B0 RNU6-1052P-201ENST00000411398 104 ntBASIC0.9□□□□□ -2.27
CTDP1Q9Y5B0 RNU6-857P-201ENST00000515893 110 ntBASIC0.9□□□□□ -2.27
CTDP1Q9Y5B0 RNU6-638P-201ENST00000516582 104 ntBASIC0.9□□□□□ -2.27
CTDP1Q9Y5B0 RNU6-719P-201ENST00000516671 104 ntBASIC0.9□□□□□ -2.27
CTDP1Q9Y5B0 MIR548AG2-201ENST00000581228 64 ntBASIC0.9□□□□□ -2.27
CTDP1Q9Y5B0 PVT1_3.1-201ENST00000620853 95 ntBASIC0.9□□□□□ -2.27
CTDP1Q9Y5B0 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.9□□□□□ -2.27
CTDP1Q9Y5B0 RNU6-208P-201ENST00000362431 107 ntBASIC0.89□□□□□ -2.27
CTDP1Q9Y5B0 Y_RNA.94-201ENST00000363068 106 ntBASIC0.89□□□□□ -2.27
CTDP1Q9Y5B0 RNU6-686P-201ENST00000364839 107 ntBASIC0.89□□□□□ -2.27
CTDP1Q9Y5B0 MIR617-201ENST00000385030 97 ntBASIC0.89□□□□□ -2.27
CTDP1Q9Y5B0 RNU6-380P-201ENST00000410207 107 ntBASIC0.89□□□□□ -2.27
CTDP1Q9Y5B0 RNU7-74P-201ENST00000459104 62 ntBASIC0.89□□□□□ -2.27
CTDP1Q9Y5B0 Y_RNA.264-201ENST00000364665 102 ntBASIC0.88□□□□□ -2.27
CTDP1Q9Y5B0 RNU6-726P-201ENST00000364680 107 ntBASIC0.88□□□□□ -2.27
CTDP1Q9Y5B0 RNU6-24P-201ENST00000384440 107 ntBASIC0.88□□□□□ -2.27
CTDP1Q9Y5B0 SNORD41.1-201ENST00000391000 69 ntBASIC0.88□□□□□ -2.27
CTDP1Q9Y5B0 U3.27-201ENST00000391237 200 ntBASIC0.88□□□□□ -2.27
CTDP1Q9Y5B0 RNU6-351P-201ENST00000516097 100 ntBASIC0.88□□□□□ -2.27
CTDP1Q9Y5B0 RNA5SP395-201ENST00000516567 118 ntBASIC0.88□□□□□ -2.27
CTDP1Q9Y5B0 MIR4714-201ENST00000580728 77 ntBASIC0.88□□□□□ -2.27
CTDP1Q9Y5B0 SNORA36.2-201ENST00000384004 127 ntBASIC0.87□□□□□ -2.27
CTDP1Q9Y5B0 MIR508-201ENST00000384857 115 ntBASIC0.87□□□□□ -2.27
CTDP1Q9Y5B0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.87□□□□□ -2.27
CTDP1Q9Y5B0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.87□□□□□ -2.27
CTDP1Q9Y5B0 snoU13.17-201ENST00000458802 104 ntBASIC0.87□□□□□ -2.27
CTDP1Q9Y5B0 RNA5SP227-201ENST00000516184 113 ntBASIC0.87□□□□□ -2.27
CTDP1Q9Y5B0 AL590095.2-201ENST00000604136 117 ntBASIC0.87□□□□□ -2.27
CTDP1Q9Y5B0 RNU6-1094P-201ENST00000362416 104 ntBASIC0.86□□□□□ -2.27
CTDP1Q9Y5B0 MIR519E-201ENST00000385075 84 ntBASIC0.86□□□□□ -2.27
CTDP1Q9Y5B0 MIR216B-201ENST00000390186 82 ntBASIC0.86□□□□□ -2.27
CTDP1Q9Y5B0 RNA5SP436-201ENST00000516020 115 ntBASIC0.86□□□□□ -2.27
CTDP1Q9Y5B0 RNA5SP94-201ENST00000516917 108 ntBASIC0.86□□□□□ -2.27
CTDP1Q9Y5B0 MIRLET7A1-201ENST00000362295 80 ntBASIC0.85□□□□□ -2.27
CTDP1Q9Y5B0 SNORA36.1-201ENST00000363424 132 ntBASIC0.84□□□□□ -2.27
CTDP1Q9Y5B0 Y_RNA.244-201ENST00000364484 109 ntBASIC0.84□□□□□ -2.27
CTDP1Q9Y5B0 RNA5SP268-201ENST00000516828 124 ntBASIC0.84□□□□□ -2.27
CTDP1Q9Y5B0 MIR6828-201ENST00000636181 60 ntBASIC0.84□□□□□ -2.27
CTDP1Q9Y5B0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CTDP1Q9Y5B0 SNORD114-26-201ENST00000363543 72 ntBASIC0.83□□□□□ -2.28
CTDP1Q9Y5B0 RNY1P8-201ENST00000383970 114 ntBASIC0.83□□□□□ -2.28
CTDP1Q9Y5B0 Y_RNA.12-201ENST00000362393 112 ntBASIC0.82□□□□□ -2.28
CTDP1Q9Y5B0 SNORA24B-201ENST00000384176 131 ntBASIC0.82□□□□□ -2.28
CTDP1Q9Y5B0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CTDP1Q9Y5B0 AC097510.1-201ENST00000510945 133 ntBASIC0.82□□□□□ -2.28
CTDP1Q9Y5B0 Y_RNA.36-201ENST00000362602 112 ntBASIC0.81□□□□□ -2.28
CTDP1Q9Y5B0 Y_RNA.371-201ENST00000365591 113 ntBASIC0.81□□□□□ -2.28
CTDP1Q9Y5B0 MIR140-201ENST00000385282 100 ntBASIC0.81□□□□□ -2.28
CTDP1Q9Y5B0 RNU6-1177P-201ENST00000391058 104 ntBASIC0.81□□□□□ -2.28
CTDP1Q9Y5B0 RNU6-269P-201ENST00000391077 97 ntBASIC0.81□□□□□ -2.28
CTDP1Q9Y5B0 YWHAEP2-201ENST00000580066 112 ntBASIC0.81□□□□□ -2.28
CTDP1Q9Y5B0 YWHAEP3-201ENST00000582767 121 ntBASIC0.81□□□□□ -2.28
CTDP1Q9Y5B0 RNU2-59P-201ENST00000410482 191 ntBASIC0.8□□□□□ -2.28
CTDP1Q9Y5B0 SNORA8.2-201ENST00000384372 139 ntBASIC0.79□□□□□ -2.28
CTDP1Q9Y5B0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.79□□□□□ -2.28
CTDP1Q9Y5B0 RNU6-807P-201ENST00000516805 107 ntBASIC0.79□□□□□ -2.28
CTDP1Q9Y5B0 RNU6-303P-201ENST00000517091 106 ntBASIC0.79□□□□□ -2.28
CTDP1Q9Y5B0 MIR4460-201ENST00000577862 86 ntBASIC0.79□□□□□ -2.28
CTDP1Q9Y5B0 MIR6779-201ENST00000617283 64 ntBASIC0.79□□□□□ -2.28
CTDP1Q9Y5B0 RNU6-681P-201ENST00000364012 104 ntBASIC0.78□□□□□ -2.28
CTDP1Q9Y5B0 MIR216A-201ENST00000385063 110 ntBASIC0.78□□□□□ -2.28
CTDP1Q9Y5B0 MIR7107-201ENST00000611489 80 ntBASIC0.78□□□□□ -2.28
CTDP1Q9Y5B0 MIR548O2-201ENST00000616090 70 ntBASIC0.78□□□□□ -2.28
CTDP1Q9Y5B0 AC092634.7-201ENST00000621022 103 ntBASIC0.78□□□□□ -2.28
CTDP1Q9Y5B0 AL162376.1-201ENST00000624117 175 ntBASIC0.78□□□□□ -2.28
CTDP1Q9Y5B0 MIR1297-201ENST00000637311 77 ntBASIC0.78□□□□□ -2.28
CTDP1Q9Y5B0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
CTDP1Q9Y5B0 RNU6-824P-201ENST00000363724 104 ntBASIC0.77□□□□□ -2.29
CTDP1Q9Y5B0 RNU6-340P-201ENST00000364005 107 ntBASIC0.77□□□□□ -2.29
CTDP1Q9Y5B0 RNU1-141P-201ENST00000364623 158 ntBASIC0.77□□□□□ -2.29
CTDP1Q9Y5B0 RNA5SP517-201ENST00000364724 117 ntBASIC0.77□□□□□ -2.29
CTDP1Q9Y5B0 AC093423.1-201ENST00000440817 142 ntBASIC0.77□□□□□ -2.29
CTDP1Q9Y5B0 MIR4484-201ENST00000582855 83 ntBASIC0.77□□□□□ -2.29
CTDP1Q9Y5B0 MIR6513-201ENST00000621188 64 ntBASIC0.77□□□□□ -2.29
CTDP1Q9Y5B0 Y_RNA.606-201ENST00000410579 103 ntBASIC0.76□□□□□ -2.29
CTDP1Q9Y5B0 RNA5SP484-201ENST00000458857 111 ntBASIC0.76□□□□□ -2.29
CTDP1Q9Y5B0 U6.81-201ENST00000612550 106 ntBASIC0.76□□□□□ -2.29
CTDP1Q9Y5B0 MIR4773-1-201ENST00000637203 78 ntBASIC0.76□□□□□ -2.29
CTDP1Q9Y5B0 MIR4662A-201ENST00000637499 67 ntBASIC0.76□□□□□ -2.29
CTDP1Q9Y5B0 RNA5SP347-201ENST00000362445 119 ntBASIC0.75□□□□□ -2.29
CTDP1Q9Y5B0 RNU6V-201ENST00000384105 107 ntBASIC0.75□□□□□ -2.29
CTDP1Q9Y5B0 Y_RNA.532-201ENST00000384590 113 ntBASIC0.75□□□□□ -2.29
CTDP1Q9Y5B0 MT-TY-201ENST00000387409 66 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms