Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.53□□□□□ -2.49
TRAPPC4Q9Y296 MIR4536-1-201ENST00000583537 88 ntBASIC-0.53□□□□□ -2.49
TRAPPC4Q9Y296 AC145423.2-201ENST00000610631 239 ntBASIC-0.53□□□□□ -2.49
TRAPPC4Q9Y296 MIR548AZ-201ENST00000616567 95 ntBASIC-0.53□□□□□ -2.49
TRAPPC4Q9Y296 MIR6759-201ENST00000638110 65 ntBASIC-0.53□□□□□ -2.49
TRAPPC4Q9Y296 SNORD45B-201ENST00000364617 72 ntBASIC-0.54□□□□□ -2.5
TRAPPC4Q9Y296 RNU6-80P-201ENST00000384195 107 ntBASIC-0.54□□□□□ -2.5
TRAPPC4Q9Y296 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.54□□□□□ -2.5
TRAPPC4Q9Y296 MIR196A2-201ENST00000385189 110 ntBASIC-0.54□□□□□ -2.5
TRAPPC4Q9Y296 SNORD2-201ENST00000459163 69 ntBASIC-0.54□□□□□ -2.5
TRAPPC4Q9Y296 AP000676.1-201ENST00000533307 52 ntBASIC-0.54□□□□□ -2.5
TRAPPC4Q9Y296 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.54□□□□□ -2.5
TRAPPC4Q9Y296 SNORD115-25-201ENST00000362619 82 ntBASIC-0.55□□□□□ -2.5
TRAPPC4Q9Y296 MIR5009-201ENST00000578736 100 ntBASIC-0.55□□□□□ -2.5
TRAPPC4Q9Y296 MIR4432-201ENST00000581823 84 ntBASIC-0.55□□□□□ -2.5
TRAPPC4Q9Y296 U6.95-201ENST00000636931 70 ntBASIC-0.55□□□□□ -2.5
TRAPPC4Q9Y296 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.56□□□□□ -2.5
TRAPPC4Q9Y296 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.56□□□□□ -2.5
TRAPPC4Q9Y296 SNORD114-4-201ENST00000363962 75 ntBASIC-0.56□□□□□ -2.5
TRAPPC4Q9Y296 MIR582-201ENST00000365731 98 ntBASIC-0.56□□□□□ -2.5
TRAPPC4Q9Y296 RNU6-284P-201ENST00000411105 106 ntBASIC-0.56□□□□□ -2.5
TRAPPC4Q9Y296 SNORD33.1-201ENST00000516213 88 ntBASIC-0.56□□□□□ -2.5
TRAPPC4Q9Y296 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.57□□□□□ -2.5
TRAPPC4Q9Y296 RNU6-813P-201ENST00000384691 107 ntBASIC-0.57□□□□□ -2.5
TRAPPC4Q9Y296 RNU6-644P-201ENST00000391155 98 ntBASIC-0.57□□□□□ -2.5
TRAPPC4Q9Y296 MIR548E-201ENST00000408287 88 ntBASIC-0.57□□□□□ -2.5
TRAPPC4Q9Y296 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.57□□□□□ -2.5
TRAPPC4Q9Y296 RNU7-55P-201ENST00000459426 62 ntBASIC-0.57□□□□□ -2.5
TRAPPC4Q9Y296 RNU6-659P-201ENST00000516454 104 ntBASIC-0.57□□□□□ -2.5
TRAPPC4Q9Y296 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.57□□□□□ -2.5
TRAPPC4Q9Y296 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.58□□□□□ -2.5
TRAPPC4Q9Y296 SNORD56B-201ENST00000384713 71 ntBASIC-0.58□□□□□ -2.5
TRAPPC4Q9Y296 SNORA32.3-201ENST00000384772 121 ntBASIC-0.58□□□□□ -2.5
TRAPPC4Q9Y296 SNORD75.1-201ENST00000408373 60 ntBASIC-0.58□□□□□ -2.5
TRAPPC4Q9Y296 RPS29P8-201ENST00000445109 171 ntBASIC-0.58□□□□□ -2.5
TRAPPC4Q9Y296 SNORD42B-201ENST00000458893 67 ntBASIC-0.58□□□□□ -2.5
TRAPPC4Q9Y296 AC093726.3-201ENST00000637588 150 ntBASIC-0.58□□□□□ -2.5
TRAPPC4Q9Y296 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.59□□□□□ -2.5
TRAPPC4Q9Y296 RNU6-132P-201ENST00000383863 107 ntBASIC-0.59□□□□□ -2.5
TRAPPC4Q9Y296 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.59□□□□□ -2.5
TRAPPC4Q9Y296 MIR548A1-201ENST00000385041 97 ntBASIC-0.59□□□□□ -2.5
TRAPPC4Q9Y296 MIR548A3-201ENST00000385297 97 ntBASIC-0.59□□□□□ -2.5
TRAPPC4Q9Y296 AC114755.3-201ENST00000481111 251 ntBASIC-0.59□□□□□ -2.5
TRAPPC4Q9Y296 RNU6-762P-201ENST00000517107 102 ntBASIC-0.59□□□□□ -2.5
TRAPPC4Q9Y296 SNORA40.17-201ENST00000517256 115 ntBASIC-0.59□□□□□ -2.5
TRAPPC4Q9Y296 AC103810.7-201ENST00000607821 91 ntBASIC-0.59□□□□□ -2.5
TRAPPC4Q9Y296 uc_338.36-201ENST00000622331 158 ntBASIC-0.59□□□□□ -2.5
TRAPPC4Q9Y296 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.6□□□□□ -2.51
TRAPPC4Q9Y296 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.6□□□□□ -2.51
TRAPPC4Q9Y296 MIR548U-201ENST00000390728 81 ntBASIC-0.6□□□□□ -2.51
TRAPPC4Q9Y296 FGF7P7-201ENST00000514120 227 ntBASIC-0.6□□□□□ -2.51
TRAPPC4Q9Y296 MIR3064-201ENST00000581130 66 ntBASIC-0.6□□□□□ -2.51
TRAPPC4Q9Y296 SNORA63.2-201ENST00000362603 126 ntBASIC-0.61□□□□□ -2.51
TRAPPC4Q9Y296 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.61□□□□□ -2.51
TRAPPC4Q9Y296 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.61□□□□□ -2.51
TRAPPC4Q9Y296 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.61□□□□□ -2.51
TRAPPC4Q9Y296 MIR4777-201ENST00000583710 86 ntBASIC-0.61□□□□□ -2.51
TRAPPC4Q9Y296 SNORD114-14-201ENST00000362723 75 ntBASIC-0.62□□□□□ -2.51
TRAPPC4Q9Y296 RNU4-36P-201ENST00000364294 144 ntBASIC-0.62□□□□□ -2.51
TRAPPC4Q9Y296 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.62□□□□□ -2.51
TRAPPC4Q9Y296 RNU6-907P-201ENST00000390924 102 ntBASIC-0.62□□□□□ -2.51
TRAPPC4Q9Y296 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.62□□□□□ -2.51
TRAPPC4Q9Y296 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.62□□□□□ -2.51
TRAPPC4Q9Y296 snoU13.13-201ENST00000458842 104 ntBASIC-0.62□□□□□ -2.51
TRAPPC4Q9Y296 SNORD4B-201ENST00000459083 72 ntBASIC-0.62□□□□□ -2.51
TRAPPC4Q9Y296 RNU6-719P-201ENST00000516671 104 ntBASIC-0.62□□□□□ -2.51
TRAPPC4Q9Y296 MIR4280-201ENST00000582178 76 ntBASIC-0.62□□□□□ -2.51
TRAPPC4Q9Y296 AC104996.3-201ENST00000590718 94 ntBASIC-0.62□□□□□ -2.51
TRAPPC4Q9Y296 SNORA24B-201ENST00000384176 131 ntBASIC-0.63□□□□□ -2.51
TRAPPC4Q9Y296 RNU6-901P-201ENST00000384593 106 ntBASIC-0.63□□□□□ -2.51
TRAPPC4Q9Y296 RNU6-502P-201ENST00000362419 108 ntBASIC-0.64□□□□□ -2.51
TRAPPC4Q9Y296 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.64□□□□□ -2.51
TRAPPC4Q9Y296 RNU6-495P-201ENST00000362995 107 ntBASIC-0.64□□□□□ -2.51
TRAPPC4Q9Y296 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.64□□□□□ -2.51
TRAPPC4Q9Y296 AL445193.1-201ENST00000441183 141 ntBASIC-0.64□□□□□ -2.51
TRAPPC4Q9Y296 AC097510.1-201ENST00000510945 133 ntBASIC-0.64□□□□□ -2.51
TRAPPC4Q9Y296 MIR548Z-201ENST00000584743 97 ntBASIC-0.64□□□□□ -2.51
TRAPPC4Q9Y296 MIR6851-201ENST00000617060 67 ntBASIC-0.64□□□□□ -2.51
TRAPPC4Q9Y296 RNU6-973P-201ENST00000364690 107 ntBASIC-0.65□□□□□ -2.51
TRAPPC4Q9Y296 SNORD116-14-201ENST00000383894 92 ntBASIC-0.65□□□□□ -2.51
TRAPPC4Q9Y296 SNORD116-17-201ENST00000383929 92 ntBASIC-0.65□□□□□ -2.51
TRAPPC4Q9Y296 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.65□□□□□ -2.51
TRAPPC4Q9Y296 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.65□□□□□ -2.51
TRAPPC4Q9Y296 SNORD116-15-201ENST00000384445 92 ntBASIC-0.65□□□□□ -2.51
TRAPPC4Q9Y296 RNU6-880P-201ENST00000384526 107 ntBASIC-0.65□□□□□ -2.51
TRAPPC4Q9Y296 SNORD116-19-201ENST00000384729 92 ntBASIC-0.65□□□□□ -2.51
TRAPPC4Q9Y296 MIR548I1-201ENST00000408810 149 ntBASIC-0.65□□□□□ -2.51
TRAPPC4Q9Y296 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.65□□□□□ -2.51
TRAPPC4Q9Y296 RNA5SP169-201ENST00000517268 117 ntBASIC-0.65□□□□□ -2.51
TRAPPC4Q9Y296 MIR3681-201ENST00000580089 72 ntBASIC-0.65□□□□□ -2.51
TRAPPC4Q9Y296 MIR3140-201ENST00000583685 90 ntBASIC-0.65□□□□□ -2.51
TRAPPC4Q9Y296 AC012531.4-201ENST00000616509 177 ntBASIC-0.65□□□□□ -2.51
TRAPPC4Q9Y296 AL391099.1-201ENST00000624635 187 ntBASIC-0.65□□□□□ -2.51
TRAPPC4Q9Y296 RNU6-476P-201ENST00000384726 107 ntBASIC-0.66□□□□□ -2.52
TRAPPC4Q9Y296 RNA5SP451-201ENST00000410588 110 ntBASIC-0.66□□□□□ -2.52
TRAPPC4Q9Y296 RNU6-519P-201ENST00000410590 108 ntBASIC-0.66□□□□□ -2.52
TRAPPC4Q9Y296 RNU6-795P-201ENST00000516323 103 ntBASIC-0.66□□□□□ -2.52
TRAPPC4Q9Y296 RNU6-62P-201ENST00000516526 102 ntBASIC-0.66□□□□□ -2.52
TRAPPC4Q9Y296 AP001180.6-201ENST00000584918 159 ntBASIC-0.66□□□□□ -2.52
TRAPPC4Q9Y296 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 211.9 ms