Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.3□□□□□ -2.46
SCN2AQ99250 SNORD114-28-201ENST00000363610 72 ntBASIC-0.31□□□□□ -2.46
SCN2AQ99250 RNU6-30P-201ENST00000384561 107 ntBASIC-0.31□□□□□ -2.46
SCN2AQ99250 MIR604-201ENST00000384880 94 ntBASIC-0.31□□□□□ -2.46
SCN2AQ99250 MIR548A3-201ENST00000385297 97 ntBASIC-0.31□□□□□ -2.46
SCN2AQ99250 MIR548U-201ENST00000390728 81 ntBASIC-0.31□□□□□ -2.46
SCN2AQ99250 RNU6-175P-201ENST00000516896 107 ntBASIC-0.31□□□□□ -2.46
SCN2AQ99250 MIR4694-201ENST00000578534 80 ntBASIC-0.31□□□□□ -2.46
SCN2AQ99250 MIR4439-201ENST00000583746 80 ntBASIC-0.31□□□□□ -2.46
SCN2AQ99250 SNORD114-11-201ENST00000363738 75 ntBASIC-0.31□□□□□ -2.46
SCN2AQ99250 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.31□□□□□ -2.46
SCN2AQ99250 U8.6-201ENST00000364939 135 ntBASIC-0.31□□□□□ -2.46
SCN2AQ99250 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.31□□□□□ -2.46
SCN2AQ99250 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.32□□□□□ -2.46
SCN2AQ99250 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.32□□□□□ -2.46
SCN2AQ99250 RNU6-154P-201ENST00000384306 106 ntBASIC-0.32□□□□□ -2.46
SCN2AQ99250 SNORA32.1-201ENST00000364514 115 ntBASIC-0.33□□□□□ -2.46
SCN2AQ99250 MIR548M-201ENST00000408260 86 ntBASIC-0.33□□□□□ -2.46
SCN2AQ99250 SNORA7.5-201ENST00000410672 110 ntBASIC-0.33□□□□□ -2.46
SCN2AQ99250 AL161932.1-201ENST00000437408 146 ntBASIC-0.33□□□□□ -2.46
SCN2AQ99250 RNU7-61P-201ENST00000515897 61 ntBASIC-0.33□□□□□ -2.46
SCN2AQ99250 MIR4460-201ENST00000577862 86 ntBASIC-0.33□□□□□ -2.46
SCN2AQ99250 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.33□□□□□ -2.46
SCN2AQ99250 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.33□□□□□ -2.46
SCN2AQ99250 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.33□□□□□ -2.46
SCN2AQ99250 SNORA25.13-201ENST00000516395 103 ntBASIC-0.33□□□□□ -2.46
SCN2AQ99250 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.34□□□□□ -2.46
SCN2AQ99250 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.34□□□□□ -2.46
SCN2AQ99250 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.34□□□□□ -2.46
SCN2AQ99250 AL157777.2-201ENST00000258070 137 ntBASIC-0.35□□□□□ -2.46
SCN2AQ99250 MIR409-201ENST00000362237 79 ntBASIC-0.35□□□□□ -2.46
SCN2AQ99250 RNU6-704P-201ENST00000364162 103 ntBASIC-0.35□□□□□ -2.46
SCN2AQ99250 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.35□□□□□ -2.46
SCN2AQ99250 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.35□□□□□ -2.46
SCN2AQ99250 RNU6-62P-201ENST00000516526 102 ntBASIC-0.35□□□□□ -2.46
SCN2AQ99250 RNU6-719P-201ENST00000516671 104 ntBASIC-0.35□□□□□ -2.46
SCN2AQ99250 MIR6129-201ENST00000616087 109 ntBASIC-0.35□□□□□ -2.46
SCN2AQ99250 MIR148A-201ENST00000362215 68 ntBASIC-0.35□□□□□ -2.47
SCN2AQ99250 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.35□□□□□ -2.47
SCN2AQ99250 RNU7-85P-201ENST00000458851 63 ntBASIC-0.35□□□□□ -2.47
SCN2AQ99250 AL035470.1-201ENST00000622571 220 ntBASIC-0.35□□□□□ -2.47
SCN2AQ99250 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.36□□□□□ -2.47
SCN2AQ99250 MIR224-201ENST00000384889 81 ntBASIC-0.36□□□□□ -2.47
SCN2AQ99250 RN7SL660P-201ENST00000614852 299 ntBASIC-0.36□□□□□ -2.47
SCN2AQ99250 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.37□□□□□ -2.47
SCN2AQ99250 RNU7-24P-201ENST00000458867 62 ntBASIC-0.37□□□□□ -2.47
SCN2AQ99250 AC068339.1-201ENST00000526965 141 ntBASIC-0.37□□□□□ -2.47
SCN2AQ99250 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.37□□□□□ -2.47
SCN2AQ99250 SNORA63.2-201ENST00000362603 126 ntBASIC-0.37□□□□□ -2.47
SCN2AQ99250 SNORD116-10-201ENST00000363791 102 ntBASIC-0.37□□□□□ -2.47
SCN2AQ99250 AL158147.1-201ENST00000443970 75 ntBASIC-0.37□□□□□ -2.47
SCN2AQ99250 MIR548AE1-201ENST00000583292 70 ntBASIC-0.37□□□□□ -2.47
SCN2AQ99250 MIR3914-2-201ENST00000637339 95 ntBASIC-0.37□□□□□ -2.47
SCN2AQ99250 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.37□□□□□ -2.47
SCN2AQ99250 RNU6-455P-201ENST00000384681 107 ntBASIC-0.38□□□□□ -2.47
SCN2AQ99250 SNORA49-201ENST00000386157 136 ntBASIC-0.38□□□□□ -2.47
SCN2AQ99250 RNU6-972P-201ENST00000391208 107 ntBASIC-0.38□□□□□ -2.47
SCN2AQ99250 AC096531.1-201ENST00000419107 107 ntBASIC-0.38□□□□□ -2.47
SCN2AQ99250 AC008267.6-201ENST00000441664 139 ntBASIC-0.38□□□□□ -2.47
SCN2AQ99250 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.38□□□□□ -2.47
SCN2AQ99250 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.38□□□□□ -2.47
SCN2AQ99250 MIR4432-201ENST00000581823 84 ntBASIC-0.38□□□□□ -2.47
SCN2AQ99250 U6.95-201ENST00000636931 70 ntBASIC-0.38□□□□□ -2.47
SCN2AQ99250 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.38□□□□□ -2.47
SCN2AQ99250 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.38□□□□□ -2.47
SCN2AQ99250 RNU6-495P-201ENST00000362995 107 ntBASIC-0.39□□□□□ -2.47
SCN2AQ99250 RNU6-132P-201ENST00000383863 107 ntBASIC-0.39□□□□□ -2.47
SCN2AQ99250 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.39□□□□□ -2.47
SCN2AQ99250 MIRLET7B-201ENST00000385140 83 ntBASIC-0.39□□□□□ -2.47
SCN2AQ99250 AC244090.1-201ENST00000441884 93 ntBASIC-0.39□□□□□ -2.47
SCN2AQ99250 RNU6-346P-201ENST00000516288 111 ntBASIC-0.39□□□□□ -2.47
SCN2AQ99250 RNU6-86P-201ENST00000606534 107 ntBASIC-0.39□□□□□ -2.47
SCN2AQ99250 MIR4788-201ENST00000639104 80 ntBASIC-0.39□□□□□ -2.47
SCN2AQ99250 RNU6-746P-201ENST00000384112 109 ntBASIC-0.4□□□□□ -2.47
SCN2AQ99250 RNU6-880P-201ENST00000384526 107 ntBASIC-0.4□□□□□ -2.47
SCN2AQ99250 SNORD4B-201ENST00000459083 72 ntBASIC-0.4□□□□□ -2.47
SCN2AQ99250 AP000676.1-201ENST00000533307 52 ntBASIC-0.4□□□□□ -2.47
SCN2AQ99250 MIR3668-201ENST00000582138 75 ntBASIC-0.4□□□□□ -2.47
SCN2AQ99250 RNA5SP275-201ENST00000363936 118 ntBASIC-0.4□□□□□ -2.47
SCN2AQ99250 SNORD58A-201ENST00000383875 65 ntBASIC-0.4□□□□□ -2.47
SCN2AQ99250 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.4□□□□□ -2.47
SCN2AQ99250 U3.27-201ENST00000391237 200 ntBASIC-0.4□□□□□ -2.47
SCN2AQ99250 RNA5SP266-201ENST00000410273 108 ntBASIC-0.4□□□□□ -2.47
SCN2AQ99250 SNORA19.1-201ENST00000410656 129 ntBASIC-0.4□□□□□ -2.47
SCN2AQ99250 RNU6-320P-201ENST00000516511 106 ntBASIC-0.4□□□□□ -2.47
SCN2AQ99250 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.41□□□□□ -2.47
SCN2AQ99250 MIR548A1-201ENST00000385041 97 ntBASIC-0.41□□□□□ -2.47
SCN2AQ99250 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.41□□□□□ -2.47
SCN2AQ99250 SNORD56B-201ENST00000384713 71 ntBASIC-0.42□□□□□ -2.48
SCN2AQ99250 MIR548E-201ENST00000408287 88 ntBASIC-0.42□□□□□ -2.48
SCN2AQ99250 RNA5SP451-201ENST00000410588 110 ntBASIC-0.42□□□□□ -2.48
SCN2AQ99250 MIR548O2-201ENST00000616090 70 ntBASIC-0.42□□□□□ -2.48
SCN2AQ99250 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.42□□□□□ -2.48
SCN2AQ99250 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.42□□□□□ -2.48
SCN2AQ99250 RNU6-659P-201ENST00000516454 104 ntBASIC-0.42□□□□□ -2.48
SCN2AQ99250 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.42□□□□□ -2.48
SCN2AQ99250 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.42□□□□□ -2.48
SCN2AQ99250 RNU6-901P-201ENST00000384593 106 ntBASIC-0.43□□□□□ -2.48
SCN2AQ99250 AL353813.1-201ENST00000440700 253 ntBASIC-0.43□□□□□ -2.48
SCN2AQ99250 MIR4777-201ENST00000583710 86 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 217.5 ms